clustTMB: Spatio-Temporal Finite Mixture Model using 'TMB'
Fits a spatio-temporal finite mixture model using 'TMB'. Covariate, spatial and temporal random effects can be incorporated into the gating formula using multinomial logistic regression, the expert formula using a generalized linear mixed model framework, or both.
| Version: | 0.1.0 |
| Depends: | R (≥ 4.0.0) |
| Imports: | cluster, clustMixType, fmesher, lme4, Matrix, mclust, methods, reformulas, MoEClust, sf, stats, TMB (≥ 1.9.0) |
| LinkingTo: | RcppEigen, TMB |
| Suggests: | bookdown, covr, cowplot, dplyr, FMsmsnReg, GGally, ggplot2, ggspatial, giscoR, inlabru, kableExtra, knitr, magrittr, MixSim, mvnfast, mvtnorm, palmerpenguins, rmarkdown, sdmTMB, sp, spData, splancs, testthat, tidyr, tweedie, wesanderson |
| Published: | 2024-10-14 |
| DOI: | 10.32614/CRAN.package.clustTMB |
| Author: | Andrea M. Havron |
| Maintainer: | Andrea M. Havron <andrea.havron at noaa.gov> |
| BugReports: | https://github.com/Andrea-Havron/clustTMB/issues |
| License: | GPL-3 |
| URL: | https://github.com/Andrea-Havron/clustTMB, https://andrea-havron.github.io/clustTMB/ |
| NeedsCompilation: | yes |
| SystemRequirements: | GNU make |
| Citation: | clustTMB citation info |
| Materials: | README NEWS |
| CRAN checks: | clustTMB results |
Documentation:
| Reference manual: | clustTMB.pdf |
| Vignettes: |
Covariance Structure (source, R code) Meuse Data Example (source, R code) |
Downloads:
| Package source: | clustTMB_0.1.0.tar.gz |
| Windows binaries: | r-devel: clustTMB_0.1.0.zip, r-release: clustTMB_0.1.0.zip, r-oldrel: clustTMB_0.1.0.zip |
| macOS binaries: | r-release (arm64): clustTMB_0.1.0.tgz, r-oldrel (arm64): clustTMB_0.1.0.tgz, r-release (x86_64): clustTMB_0.1.0.tgz, r-oldrel (x86_64): clustTMB_0.1.0.tgz |
Linking:
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