Integration of Omics and Phenotypic Data for Precision Medicine

Juan Zhao, QiPing Feng, Wei-Qi Wei

Methods in Molecular Biology (Clifton, N.J.), vol. 2486, 2022, pp. 19--35

Identifying Potential Therapeutic Applications and Diagnostic Harms of Increased Bilirubin Concentrations: A Clinical and Genetic Approach

Jacy T. Zanussi, Juan Zhao, Chad A. Dorn, Ge Liu, QiPing Feng, WeiQi Wei, Jonathan D. Mosley, C. Michael Stein, Vivian K. Kawai

Clinical Pharmacology and Therapeutics, vol. 111, 2022 Feb, pp. 435--443

Natural language processing to identify lupus nephritis phenotype in electronic health records

Yu Deng, Jennifer A. Pacheco, Anh Chung, Chengsheng Mao, Joshua C. Smith, Juan Zhao, Wei-Qi Wei, April Barnado, Chunhua Weng, Cong Liu, Adam Cordon, Jingzhi Yu, Yacob Tedla, Abel Kho, Rosalind Ramsey-Goldman, Theresa Walunas, Yuan Luo

2021 Dec

American Heart Association Precision Medicine Platform Addresses Challenges in Data Sharing

Laura M. Stevens, James A. de Lemos, Sandeep R. Das, Christine Rutan, Heather M. Alger, Mitchell S.V. Elkind, Juan Zhao, Kritika Iyer, C. Alberto Figueroa, Jennifer L. Hall

Circulation: Cardiovascular Quality and Outcomes, vol. 14, 2021 Sep, pp. e007949

Machine Learning Challenges in Pharmacogenomic Research

Wei-Qi Wei, Juan Zhao, Dan M. Roden, Josh F. Peterson

Clinical Pharmacology and Therapeutics, vol. 110, 2021 Sep, pp. 552--554

DDIWAS: High-throughput electronic health record-based screening of drug-drug interactions

Patrick Wu, Scott D. Nelson, Juan Zhao, Cosby A. Stone, QiPing Feng, Qingxia Chen, Eric A. Larson, Bingshan Li, Nancy J. Cox, C. Michael Stein, Elizabeth J. Phillips, Dan M. Roden, Joshua C. Denny, Wei-Qi Wei

Journal of the American Medical Informatics Association: JAMIA, vol. 28, 2021 Jul, pp. 1421--1430

ConceptWAS: A high-throughput method for early identification of COVID-19 presenting symptoms and characteristics from clinical notes

Juan Zhao, Monika E. Grabowska, Vern Eric Kerchberger, Joshua C. Smith, H. Nur Eken, QiPing Feng, Josh F. Peterson, S. Trent Rosenbloom, Kevin B. Johnson, Wei-Qi Wei

Journal of Biomedical Informatics, vol. 117, 2021 May, p. 103748

Precision medicine, AI, and the future of personalized health care

Kevin B. Johnson, Wei-Qi Wei, Dilhan Weeraratne, Mark E. Frisse, Karl Misulis, Kyu Rhee, Juan Zhao, Jane L. Snowdon

Clinical and Translational Science, vol. 14, 2021 Jan, pp. 86--93

PheMap a multi-resource knowledge base for high-throughput phenotyping within electronic health records

Neil S. Zheng, QiPing Feng, V. Eric Kerchberger, Juan Zhao, Todd L. Edwards, Nancy J. Cox, C. Michael Stein, Dan M. Roden, Joshua C. Denny, Wei-Qi Wei

Journal of the American Medical Informatics Association: JAMIA, vol. 27, 2020 Nov, pp. 1675--1687

Blockchain-Based Decentralized Accountability and Self-Sovereignty in Healthcare Systems

Sachin Shetty, Xueping Liang, Daniel Bowden, Juan Zhao, Lingchen Zhang

Horst Treiblmaier, Roman Beck, Business {Transformation} through {Blockchain}: {Volume} {II}, Springer International Publishing, Cham, 2019, pp. 119--149

Learning from longitudinal data in electronic health record and genetic data to improve cardiovascular event prediction

Juan Zhao, QiPing Feng, Patrick Wu, Roxana Lupu, Russel A Wilke, Quinn S Wells, Joshua Denny, Wei-Qi Wei

Scientific Reports, vol. 9, 2019, p. 717

Using topic modeling via non-negative matrix factorization to identify relationships between genetic variants and disease phenotypes: A case study of Lipoprotein(a) LPA

Juan Zhao, QiPing Feng, Patrick Wu, Jeremy L. Warner, Joshua C. Denny, Wei-Qi Wei

PloS One, vol. 14, 2019, pp. e0212112

Mapping ICD-10 and ICD-10-CM Codes to Phecodes: Workflow Development and Initial Evaluation

Patrick Wu, Aliya Gifford, Xiangrui Meng, Xue Li, Harry Campbell, Tim Varley, Juan Zhao, Robert Carroll, Lisa Bastarache, Joshua C. Denny, Evropi Theodoratou, Wei-Qi Wei

JMIR medical informatics, vol. 7, 2019 Nov, pp. e14325

Abstract 14831: Using Machine Learning to Identify Sub-Phenotypes of Cardiovascular Disease for Genetic Association

Zhao Juan, Zhang Yun, Feng Qiping, Wei Wei-qi

Circulation, vol. 140, 2019 Nov, pp. A14831--A14831

Detecting time-evolving phenotypic topics via tensor factorization on electronic health records: Cardiovascular disease case study

Juan Zhao, Yun Zhang, David J. Schlueter, Patrick Wu, Vern Eric Kerchberger, S. Trent Rosenbloom, Quinn S. Wells, QiPing Feng, Joshua C. Denny, Wei-Qi Wei

Journal of Biomedical Informatics, vol. 98, 2019 Oct, p. 103270

Transfer learning for detecting unknown network attacks

Juan Zhao, Sachin Shetty, Jan Wei Pan, Charles Kamhoua, Kevin Kwiat

EURASIP Journal on Information Security, vol. 2019, 2019 Feb, p. 1

A Reliable Data Provenance and Privacy Preservation Architecture for Business-Driven Cyber-Physical Systems Using Blockchain

Xueping Liang, Sachin Shetty, Deepak K Tosh, Juan Zhao, Danyi Li, Jihong Liu

International Journal of Information Security and Privacy (IJISP), vol. 12, 2018, pp. 68--81

Towards decentralized accountability and self-sovereignty in healthcare systems

Xueping Liang, Sachin Shetty, Juan Zhao, Daniel Bowden, Danyi Li, Jihong Liu

International {Conference} on {Information} and {Communications} {Security}, Springer, 2017, pp. 387--398

Towards data assurance and resilience in iot using blockchain

Xueping Liang, Juan Zhao, Sachin Shetty, Danyi Li

{MILCOM} 2017-2017 {IEEE} {Military} {Communications} {Conference} ({MILCOM}), IEEE, 2017, pp. 261--266

Integrating blockchain for data sharing and collaboration in mobile healthcare applications

Xueping Liang, Juan Zhao, S. Shetty, Jihong Liu, Danyi Li

2017 IEEE 28th Annual International Symposium on Personal, Indoor, and Mobile Radio Communications (PIMRC), 2017

Hoeffding Tree Algorithms for Anomaly Detection in Streaming Datasets: A Survey

Asmah Muallem, Sachin Shetty, Jan Wei Pan, Juan Zhao, Biswajit Biswal

Journal of Information Security, vol. 8, 2017, p. 339

Feature-based transfer learning for network security

Juan Zhao, Sachin Shetty, Jan Wei Pan

{MILCOM} 2017-2017 {IEEE} {Military} {Communications} {Conference} ({MILCOM}), IEEE, 2017, pp. 17--22

An Influence Field Perspective on Predicting User’s Retweeting Behavior

Yi Shen, Jianjun Yu, Kejun Dong, Juan Zhao, Kai Nan

International {Conference} on {Web}-{Age} {Information} {Management}, Springer, 2015, pp. 3--16

Recommending funding collaborators with scholar social networks

Juan Zhao, Kejun Dong, Jianjun Yu

2014 {International} {Conference} on {Data} {Science} and {Advanced} {Analytics} ({DSAA}), IEEE, 2014, pp. 122--127

DSN: A Knowledge-Based Scholar Networking Practice Towards Research Community

Juan Zhao, Kejun Dong, Jianjun Yu, Wei Hu

2013 {IEEE} 9th {International} {Conference} on e-{Science}, IEEE, 2013, pp. 238--244

A Cross-disciplinary Collaborative Research Platform-Study on Qinghai Lake Joint Research Environment

Juan Zhao, Shuren Li, Jianjun Yu, Kejun Dong, Kai Nan, Baoping Yan

2010 {Sixth} {International} {Conference} on {Signal}-{Image} {Technology} and {Internet} {Based} {Systems}, IEEE, 2010, pp. 211--216

E-Scholar: Improving academic search through combining metasearch with entity extraction

Juan Zhao, Kejun Dong, Le Yang, Kai Nan, Baoping Yan

2009 {IEEE} {Youth} {Conference} on {Information}, {Computing} and {Telecommunication}, IEEE, 2009, pp. 247--250