BASE FLIPPING (Q56256582)

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English	BASE FLIPPING	article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

1 reference

Europe PubMed Central

Base flipping (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

Richard Roberts

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

author name string

Cheng X

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

publication date

1 January 1998

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

number of pages

18

1 reference

based on heuristic

inferred from page(s)

Annual Review of Biochemistry

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

67

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

1

0 references

181-198

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9759487%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymes

1 reference

11 October 2022

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Crystal structure of TFIID TATA-box binding protein

1 reference

11 October 2022

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HhaI methyltransferase flips its target base out of the DNA helix

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Nucleotide mimicry in the crystal structure of the uracil-DNA glycosylase-uracil glycosylase inhibitor protein complex

1 reference

11 October 2022

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Finding a basis for flipping bases.

1 reference

11 October 2022

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A new class of uracil-DNA glycosylases related to human thymine-DNA glycosylase

1 reference

11 October 2022

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Biological implications of the mechanism of action of human DNA (cytosine-5)methyltransferase

1 reference

11 October 2022

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Transcription factors: structural families and principles of DNA recognition

1 reference

11 October 2022

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HhaI and HpaII DNA methyltransferases bind DNA mismatches, methylate uracil and block DNA repair

1 reference

11 October 2022

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Precluding uracil from DNA

1 reference

11 October 2022

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Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis

1 reference

11 October 2022

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DNA-repair enzymes

1 reference

11 October 2022

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M.HhaI binds tightly to substrates containing mismatches at the target base

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structure and Function of DNA Methyltransferases

1 reference

11 October 2022

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Atomic structure of the DNA repair [4Fe-4S] enzyme endonuclease III

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

DNA-protein interactions: IHF--the master bender

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Three-dimensional structure of a DNA repair enzyme, 3-methyladenine DNA glycosylase II, from Escherichia coli.

1 reference

11 October 2022

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The structural basis of specific base-excision repair by uracil-DNA glycosylase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

On base flipping

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

DNA containing 4'-thio-2'-deoxycytidine inhibits methylation by HhaI methyltransferase

1 reference

11 October 2022

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Co-crystal structure of TBP recognizing the minor groove of a TATA element

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Crystallographic refinement and structure of DNase I at 2 A resolution

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

A model for DNA binding and enzyme action derived from crystallographic studies of the TaqI N6-adenine-methyltransferase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Enzymatic C5-cytosine methylation of DNA: mechanistic implications of new crystal structures for HhaL methyltransferase-DNA-AdoHcy complexes

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

A structural basis for the preferential binding of hemimethylated DNA by HhaI DNA methyltransferase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

DNA distortion and base flipping by the EcoRV DNA methyltransferase. A study using interference at dA and T bases and modified deoxynucleosides

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structure of pvu II DNA-(cytosine N4) methyltransferase, an example of domain permutation and protein fold assignment

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Isolation, characterization, and properties of a labile hydrolysis product of the antitumor nucleoside, 5-azacytidine

1 reference

11 October 2022

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Crystal structure of a yeast TBP/TATA-box complex

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Crystal Structure of DNA Photolyase from Escherichia coli

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Identification of a subdomain within DNA-(cytosine-C5)-methyltransferases responsible for the recognition of the 5' part of their DNA target.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

DNA modification by methyltransferases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structure of DNA-porphyrin complex

1 reference

11 October 2022

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Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionine

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structural basis for the excision repair of alkylation-damaged DNA

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Universal catalytic domain structure of AdoMet-dependent methyltransferases.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Targeted base stacking disruption by the EcoRI DNA methyltransferase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Crystal structure of human uracil-DNA glycosylase in complex with a protein inhibitor: protein mimicry of DNA

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

The crystal structure of Haelll methyltransferase covalently complexed to DNA: An extrahelical cytosine and rearranged base pairing

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

A specific endonuclease from Haemophilus haemolyticus

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

How do DNA repair proteins locate damaged bases in the genome?

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

The DNA (cytosine-5) methyltransferases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structure and function of the multifunctional DNA-repair enzyme exonuclease III

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Dynamics of mismatched base pairs in DNA.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Crystal structure of an ATP-dependent DNA ligase from bacteriophage T7

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structural determinants for specific recognition by T4 endonuclease V

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

DNA glycosylases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Crystal structure of the HhaI DNA methyltransferase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

Structure and function of DNA photolyase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1146/ANNUREV.BIOCHEM.67.1.181

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