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CV Sharif Hala Feb - 2017

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Curriculum Vitae

Sharif Matouq Ahmed Hala


Tel: 02-6610061
Mobile: 00966-501057777
E-mail: Sharif.Hala@gmail.com

Career Objective
- To work in a challenging professional research position, which in-turn
will offer interesting prospects of growth, progress and exciting
advancement

- To obtain the highest level –possible- of learning and apply it in future


biotechnology and medical research applications

- To apply research outcomes through finding a start-up biotechnology


company

Profile
- To utilize my interpersonal and distinguished communication skills,
determination, international collaborative networks and lab skills in
joining a research team to contribute to their research complex genetic
traits in relations to diseases.

- To use my background in molecular biology, medical genetics, stem


cell and musculoskeletal science to tinker with old products to
develop new methods and protocols.

- To excel in the fields of biomedical research and to significantly


contribute towards the growth of a dynamic organization that offers
challenging opportunities for proficient accomplishments.

Education and Work Experience


 Co-founder of Meteriod “Innovative communication techonology”.
Taqadam program start-up winner.

 Co-founder of Algorizm “Genetic Sequencing Company”.


www.algorizmsa.com

 PhD Candidate – King Abdullah University of Science and Technology


(KAUST) 2015-present
Researching patient samples at KAUST using NGS methods at the pathogen genomics laboratory of
Prof. Arnab Pain.
 National Guard Health Affairs (NGHA) – King Abdullah Medical Research
Centre (KAIMRC) 2013 – Present
Working as Scientific Research Assistant. Undergoing multiple projects and in charge of the
confocal imaging systems.

 University of Oxford, UK – Stem Cell – Research projects Jan2011 –


May2013
Research in Stem Cell Epigenetics & Musculoskeletal Sciences

 University of Aberdeen, UK - MSc Aug2008 - Jun2010


Masters degree in Medical Molecular Genetics: a one-year degree, which
includes a six months research project.

 University of Aberdeen, UK - BSc May2003 - Jun2008


Bachelor degree in Molecular Biology with Honors. : A four-year degree that
includes a one-year honor/intensive of hands-on research and work
experiences.

 University of Wisconsin Superior, Wisconsin, USA Oct2000 - Jul2002


- TOFEL intensive course at SESLI office for one year.

- Introduction to Biology and Environmental science: a one-year course was


directed toward understanding environmental issues and organismal
behavioral due to cultural changes.

Research Experience
The combined laboratory and research
projects/experience yield a total of nine years.

Research Projects
 Next Generation Sequencing (NGS) based metagenomics and
targeted genomic analysis of microbial communities present in
various patient-derived aspirations, bodily fluids, or bacterial/fungal
isolates from patients at the MNGHA.
 The use of femtosecond near infrared laser microscopy for targeted
transfection of different somatic mammalian cells as well as adipose
derived stem cells with non-viral vectors containing transcription
factors (Oct4, Sox2 and Klf4) individually into induced pluripotent
stem cell generation.
 Generation of the induced pluripotent stem cell using non-viral
methods (Originally generated by S.Yamanka the NOBEL prize winner
2012 on the generation of Human iPSCs) by electroporation of three
plasmids containing embryonic reprogramming factors (Oct4, Sox2
and Klf4) and detection plasmid as green fluorescent protein. This
project involved the use of LSM710 confocal/multiphoton microscope
and Becton Dickson Pathway.

2
 Differentiation of human induced pluripotent stem cells into
mesodermal linage into chondrocyte to form cartilage for future
clinical trials. The project aimed to employ this novel embryonic stem
cell-like resource to promote chondrogenic differentiation using a new
pluripotent and possibly autologous source.
 A genome-wide scan (GWAS) of 3500 osteoporotic females
investigation: An association study of NADSYN1 gene was
investigated using different single nucleotide polymorphisms to
determine the effect of vitamin D serum levels and different
mutations within the NADSYN1. This project was carried out at the
Institute of Medical Science in University of Aberdeen.
 At the Institute of Medical Science in University of Aberdeen: The
project involved general lab skills, cell culture and statistical analysis
through studying the effect of drug mixtures against Candida species
such as: Caspofungin. The drugs concentrations were compared
against growth, cell number and other parameters to determine the
effect and differences on fungal species.

Skills
 Statistical analysis of cultural and genetic studies including:

- T-test and pedigrees formation family studies and bioinformatics

- Able to utilize statistical programs such as Microsoft Excel and Prizim


for research analysis

 Several Lab Skills including:

- Cultural preparation and growth media for several microorganisms


including stem cell culturing, reprogramming somatic cells into
induced pluripotent stem cells (embryonic stem cell-like) and
differentiation

- Electroporation & opto-poration transfection of DNA into tissue/cells

- Polymerase chain reaction (PCR), Real time PCR and Quantitative PCR,
protein purification, identification and quantification (e.g SDS-PAGE,
Two-Hybrid system)

- Cloning in bacteria and yeast using gel electrophoresis, north,


southern and western blotting and DNA extraction including
restriction aanalyses and genotyping

- Genome sequencing techniques and library creation for multiple


platforms including Sanger, Illumina (HiSeq, MiSeq, ISeq), Nanopore,
PacBio and Ion torrent.

 Computer skills including:

3
- Microsoft office, endnote, refworks, SPSS and iWORK. Several other
programs including MAC/Linux system programs

- Email (outlook, Mail, Firefox) and Internet world wide web search

- Searching scientific articles (such as Pubmed, Elsevier and others)


and VPN extraction services

- Bioinformatic analyses of whole-genome sequence using multiple


assembly, mapping, SNP calling.

 Language: (bilingual) fluent in Arabic and English (listening, speaking


and writing)

 Taught and practiced presentation and lecturing skills including


simplifying biological and genetic terms.

 Communicative, able to work independently with minimal supervision


and meet deadlines through time management

 Problem solver including laboratory protocols trouble shooting and


creative thinker

 Managing and supervising molecular biology, wet and dry lab with
high efficiency and under tight health and safety rules and regulations

Seminars and Lectures 2001-2014


Attended several seminars, lectures and work groups in several
places. These may include biomedical, medical anatomy, genetic
diseases, contribution of similar genes in different diseases and
several other genetic, stem cell and biochemical research findings.
They were as follows:

- Arab Health and Arab Lab – Dubai, UAE (2014)


- Multiple medical and educational Saudi Arabia conferences at NGHA,
KAU (2013)
- Oxford University (2010-2012) – several presentations
- University of Bristol (2011) – Presented poster and accepted abstract
- The Institute of Medical Science – University of Aberdeen (2004-2009)
- University of Kansas Missouri (2003)
- University of Wisconsin Superior (2001)
- University of Minnesota Duluth (2001)

Publications
- Protective effect of metoclopramide against organophosphate-
induced apoptosis in the murine skin fibroblast L929.
Jaber BM, Petroianu GA, Rizvi SA, Borai A, Saleh NA, Hala SM, Saleh

4
AM

- Abstract accepted by the British Society for Matrix Biology (BSMB):


(2011)
Directed Differentiation of Human Induced Pluripotent Stem
Cells into Chondrocytes
S Hala¹, C Yapp1, A Kramm1, L Carpenter2, S Watt2, A Carr1, J Dunford1,
U Oppermann1, U Tirlapur1

- Poster and oral presentation at the Annual Symposium of Stem Cell – Oxford 2011

Human Induced Pluripotent Stem Cells differentiation into Cartilage


under Hypoxia
S Hala¹, C Yapp1, A Kramm1, L Carpenter2, S Watt2, A Carr1, J Dunford1,
U Oppermann1,
U Tirlapur1
Botnar Research Centre, Institute of Musculoskeletal Science,
University of Oxford

Oral Presentation

- Speaker at several residents and consultant research courses held at


National Guard Health Affairs since 2015-present

- Invited Speaker at the “prestigious” Dunn School of Pathology for research


on Chondrogenic differentiation of Human Induced Pluripotent Stem Cells
(2012)
- Several presentations at the Botnar Research Centre, Institute of
Musculoskeletal Science, Oxford University including the Annual
research development and discussion. Further lectures, seminars were
done at the National Guard Health Affairs – Research centre and King
Abdulaziz University, Jeddah Saudi Arabia (2010-2014)

- Single nucleotide polymorphisms to determine the effect of vitamin


D serum levels and different mutations within the NADSYN1, University
of Aberdeen (2009)

Rewards

5
- High School Student of the Year (1998)

- The Saudi government royal scholarship award (2003)

- Prize of the top & excellent lab-group, University of Aberdeen (2007)

- Prize for excellence of research from United Kingdom Cultural Buru (2011)

- The Royal Prize for Science and Achievment - honored by the Saudi
Ambassador Prince Muhammed Bin Nawaf Al-Abdulaziz for excellence in
British and Irish universities (2012-2013)

- Certificates of appreciation and various prizes from the MNGHA and KSAU-
HS

References

Available Upon Request.

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