Introduction To Microfluidics: Jonathan Cottet and Philippe Renaud
Introduction To Microfluidics: Jonathan Cottet and Philippe Renaud
Introduction To Microfluidics: Jonathan Cottet and Philippe Renaud
1
Introduction to microfluidics
Jonathan Cottet and Philippe Renaud
Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland
A Cross-sectional area m2
a, b Dimensions m
C Capacitance F
List of symbols c0,i Bulk concentration of the mol L1
ion i
Constants Ci Concentration of solute mol m3
d Thickness of dielectric m
layer
Symbol Name Value Units D Diffusion coefficient m2 s1
E Electric field V m1
e Elementary 1.6 1019 C
f Frequency Hz
charge
h Height m
g Gravitational 9.81 m s2
I Electric current A
acceleration
pffiffiffiffiffiffiffi L Length m
j Imaginary 1 –
LD Diffusion length m
number
Drug Delivery Devices and Therapeutic Systems 3 # 2021 Elsevier Inc. All rights reserved.
https://doi.org/10.1016/B978-0-12-819838-4.00014-6
4 1. Introduction to microfluidics
I. Microfluidics
1 What is microfluidics? A brief definition and history 5
Since then, the field of microfluidics has con- 0 1
siderably grown and its many advantages, as vx
presented by Albert Folch [4], can be listed: v ¼ @ vy A (1)
vz
- Flow is often laminar and can be
mathematically modeled. In the field of fluid mechanics and microflui-
- Microchannel sizes are of the same order of dics, vectorial operators are often used. The
magnitude as biological cells, allowing direct operators Nabla r and Laplacian Δ are defined
interactions with cells for seeding and sorting as follows:
as well as for probing a cell and its internal 0 1
∂
components.
B ∂x C
- Automation can be provided on the system by B C
B∂C ∂ ∂ ∂
microvalves and micropumps. B C
r¼B C¼ , , (2)
- Due to the small size of the fabricated devices, B ∂y C ∂x ∂y ∂z
B C
the batch production cost should be reduced. @∂A
- The amount of reagents used is smaller as well ∂z
as the amount of sample needed.
- Analysis can be performed faster and in So:
0
1
parallel. ∂p
- The compactness of the devices allows B ∂x C
B C
portability. B ∂p C ∂p ∂p ∂p
B C
- The increase of the surface to volume ratio grad ðpÞ ¼ — p ¼ B C ¼ , , (3)
B ∂y C ∂x ∂y ∂z
allows some processes such as thermal cycling B C
@ ∂p A
to be accelerated.
∂z
Microfluidics is, therefore, a key technology
for biotechnologies in fields ranging from health ∂vx ∂vy ∂vz
(personalized medicine, diagnosis) to biology div ðvÞ ¼ — :v ¼ + + (4)
∂x ∂y ∂z
(cell culture, bioprinting) as well as cosmetics
(emulsions and formulations) and pharmaceuti- ∂2 p ∂2 p ∂2 p
cals (drug discovery). Δp ¼ + + (5)
∂x2 ∂y2 ∂z2
This chapter aims at offering the reader a
broad presentation of the key concepts used in 0 1
∂2 vx ∂2 vx ∂2 vx
microfluidics to provide some guidance for B ∂x2 + +
understanding the forces and effects at play B ∂y2 ∂z2 CC
B C
when designing microfluidic chips. Such under- B ∂2 v C
B y ∂ vy ∂ vy C
2 2
standing is critical for the comprehension of Δv ¼ B 2 + 2 + 2 C (6)
B ∂x ∂y ∂z C
potential failure modes of microfluidics devices B C
B 2 C
and troubleshooting, considerations that will be @ ∂ vz ∂2 vz ∂2 vz A
+ +
described in the following chapters. ∂x2 ∂y2 ∂z2
I. Microfluidics
6 1. Introduction to microfluidics
1.2 Fluid definition The right side of the equation corresponds to the
different forces applied to the fluid particle
A fluid is characterized by the property that it where:
will deform continuously and with ease under
the action of external forces [6]. Both liquids - ρg corresponds to the volumic forces, in this
and gases can be considered as fluids and their case, the impact of gravity on the fluid.
shape will be determined by the container in - — p is a surface force and corresponds to the
which they are held. The field of study of fluid impact of pressure on the fluid.
behavior is called fluid mechanics and is divided - ηΔv is a volumic equivalent of the viscosity
between fluid statics, where fluids are at rest, and forces. The dynamic viscosity is usually
fluid dynamics, where fluids are in motion. The expressed in poise (symbol P or Po) where 1
following section is dedicated to the study of Po ¼ 0.1 Pa s. At 20°C and constant
the equations governing fluids mechanics. In atmospheric pressure, ηwater ¼ 0.01 Po ¼ 1 cPo
most cases, the fluid considered is Newtonian and ηair ¼ 0.018 cPo.
(its viscosity does not depend on the stress
applied and is constant) and incompressible
(div(v) ¼ 0) as it is the case for aqueous solutions. 1.4 Reynolds number
To characterize the fluid regime in fluidics, a
1.3 Navier-stokes equation dimensionless number is often used, the Reyn-
olds number, abbreviated Re, and is defined as
Applying Newton’s second law of motion on the ratio of inertial forces to viscous forces
a small element of a Newtonian incompressible expressed in Eq. (10).
fluid with constant viscosity, we obtain Eq. (7).
ρvL vL
dv Re ¼ ¼ (10)
ρ ¼ ρg — p + ηΔv (7) η ν
dt
where v is the typical velocity in the microchan-
where v is the flow velocity (expressed in m s1),
nel (m s1) and L is the characteristic dimension
ρ is the density of the fluid (kg m3), t is the time
of the microchannel (m), for example, the diam-
(s), g is the gravitational acceleration (g ¼ 9.81 m
eter for a pipe. Additionally ν, the kinematic vis-
s2), p is the pressure (Pa), and η is the dynamic
cosity (expressed in m2 s1 or stokes (symbol St)
viscosity (Pa s).
where 1 St ¼ 1 cm2 s1), can be defined as (9)
The Navier-Stokes equation is composed of
several terms: η
ν¼ (11)
ρ
- The left term corresponds to the variation of the
speed of a particle moving in space. As the Three different regimes can be distinguished
speed depends on time and position, v ¼ v(r, t). [7–9]:
This derivative can be rewritten as Eq. (8). - If Re < 2300, the flow is laminar.
- If 2300 < Re < 4000, a nonfully developed
dv ∂v turbulence occurs.
¼ + ðv:— Þv (8)
dt ∂t - If Re > 4000, the flow is fully turbulent.
The Navier-Stokes equation can be rewritten as In microfluidics, Re < 2300 and the flow is
Eq. (9). typically laminar. For example, if one considers
∂v a pipe of diameter 10 μm and a water flow of
ρ + ρðv:— Þv ¼ ρg — p + ηΔv (9) 103 m/s, the calculated Re ¼ 102 ≪ 2300.
∂t
I. Microfluidics
1 What is microfluidics? A brief definition and history 7
1.5 Flow profile in a cylinder Projecting the Navier-Stokes equation along the
z-axis and expressing the Laplacian in the cylin-
For a low Reynolds number, the Navier- drical coordinate system, we obtain (17).
Stokes equation can be simplified as (12).
1∂ ∂vz 1 ∂2 vz ∂2 vz 1 ΔP
∂v r + 2 2 + 2 ¼ (17)
ρ ¼ ρg — p + ηΔv (12) r ∂r ∂r r ∂θ ∂z η L
∂t
If we consider a permanent flow of a viscous Since v and consequently vz only depend on r,
Newtonian and incompressible fluid between we obtain (18).
Pin and Pout with ΔP ¼ Pin Pout in a horizontal 1∂ ∂vz 1 ΔP
pipe of radius R and length L, as presented in r ¼ (18)
r ∂r ∂r η L
Fig. 1, we obtain (13).
Integrating this equation, we obtain (19).
ηΔv ¼ — p (13)
1 ΔP 2
vz ð r Þ ¼ r + A lnðrÞ + B (19)
Due to the symmetry of the system around the 4η L
z-axis, it is interesting to consider the cylindrical
coordinate system in this example for the veloc- Since vz(r ¼ 0) should be of a finite value and
ity (14). vz(r ¼ R) ¼ 0 (no slip condition), we have (20).
1 ΔP 2
v ¼ vðr Þ ¼ vðr, θ, zÞ (14) A ¼ 0 and B ¼ R (20)
4η L
For the same reason, v does not depend on θ and Therefore (21).
is invariant along the z-axis (15).
1 ΔP 2 2
v ¼ vðrÞ (15) vz ðrÞ ¼ R r (21)
4η L
The pressure is also constant over a slice of the The result is characteristic of the parabolic flow
pipe (16). profile in the laminar regime and is illustrated in
Fig. 2.
∂p Pout Pin ΔP
¼ Constant ¼ ¼ (16) The flow rate over a pipe section is called the
∂z L L Hagen-Poiseuille law and is defined as (22).
ð
ð θ¼2π
r¼R
Q¼ vz ðrÞ dr dθ (22)
r¼0 θ¼0
ur
uz
Pin R Pout
r
u r z
v(r)
R
z
I. Microfluidics
8 1. Introduction to microfluidics
ð
r¼R
More formulas for different geometries can be
2π ΔP 2 2
Q¼ R r r dr found in [6] (parabola), [5] (eccentric annulus),
4η L
r¼0 [11] (triangular and trapezoidal cross-sections
r¼R which are profiles often generated by microfab-
π ΔP R2 r2 r4
¼ (23) rication techniques), etc.
2η L 2 4 r¼0
Thanks to this analogy, Kirchhoff laws can be
applied in a microfluidic system and the follow-
Therefore (24). ing relationships can be written:
π ΔPR4 - For n resistances in series (26).
Q¼ (24)
8η L
X
n
As presented in (24), the flow rate is propor- RhTotal ¼ Rhi (26)
tional to R4, hence reducing the diameter of a i¼1
factor 2 will reduce the flow rate by a factor 16. - For n resistances in parallel (27).
!1
Xn
1
1.6 Analogy between electrical and RhTotal ¼ (27)
hydraulic circuits R
i¼1 hi
I. Microfluidics
1 What is microfluidics? A brief definition and history 9
TABLE 1 Example of hydraulic resistances for different cross-sectional shapes of a straight channel The numerical
values given for Rh are given considering η ¼ 1. 103 Pa s, L ¼ 1 mm, a ¼ 50 μm, b ¼ 20 μm, h ¼ 100 μm and w ¼ 500 μm.
P is the perimeter and A the cross-sectional area
Rh Rh
Shape Figure Formula [1011 Pa s m23]
2
Ellipse b b 36.92
1+
a a 1
π ηL 3 a4
4
b
a
Triangle pffiffi ηL
320 295.6
a a 3 a4
a
Two plates w 12 hηL
3w
0.24
h
Rectangle w
12 ηL 0.27
h h3 w
h 10:63
w
Square h 28:4 ηL
h4
2.84
Arbitrary 2ηL AP 3
2
–
P
A
Adapted from H. Bruus. Theoretical Microfluidics, OUP, Oxford, 2008; F.M. White. Viscous Fluid Flow, McGraw-Hill, New York, 2006.
I. Microfluidics
10 1. Introduction to microfluidics
I. Microfluidics
1 What is microfluidics? A brief definition and history 11
1.12 Surface tension - If θ > 90° and the liquid is water, the surface is
said to be hydrophobic.
Surface tension is “the property of the surface - If θ < 90° and the liquid is water, the surface is
of a fluid that causes its surface to be attracted to said to be hydrophilic.
another surface” [4, 16], expressed in N m1 in SI
units. For liquids, surface tension is equivalent For such a system, we can also write the law
to the surface energy. of Young-Dupre (38).
If we consider a drop of fluid or radius R
immersed in another fluid and P1 the pressure γ sg γ lg cos ðθÞ γ sl ¼ 0 (38)
inside the drop and P2 the pressure outside,
where γ sl, γ lg, and γ sg correspond, respectively, to
we obtain the Young-Laplace equation (36).
the surface energy between solid-liquid, liquid-
γ gas, and solid-gas.
P1 P2 ¼ ΔP ¼ (36)
R It is important to notice that surface tensions
where γ is the surface tension (N m1), R is the are temperature sensitive and in most cases, the
radius of the drop of fluid (m), and P is the pres- surface tension decreases with an increase in
sure (Pa). temperature.
For a three-dimensional interface of arbitrary
shape between two fluids, the Young-Laplace
equation [17] becomes (37). 1.13 Capillary action
1 1 Capillary action is the result of surface ten-
P¼γ + (37)
R1 R2 sion and corresponds to the ability of a liquid
to flow spontaneously through thin pipes. If
where R1 and R2 are the two radii of principal
we consider a capillary filled with liquid as illus-
curvature at the point considered and γ is the
trated in Fig. 4, the capillary pressure obtain is
surface tension.
presented in Eq. (39).
If we now consider a drop of liquid on a sur-
face surrounded by gas as illustrated in Fig. 3, 2γcosðθÞ
we obtain two possible cases depending on the ΔPc ¼ (39)
R
value of the angle between the solid-liquid inter-
face and the liquid-gas interface called “contact where γ is the interfacial tension and R is the
angle” θ: radius of curvature of the interface.
= lg
Liquid
Gas Gas
Liquid
sg sl
Solid Solid
(A) (B)
FIG. 3 Forces at the contact point. (A) Hydrophobic surface if θ > 90° and (B) Hydrophilic surface if θ < 90°. γ sl, γ lg, and γ sg
correspond, respectively, to the surface energy between solid-liquid, liquid-gas, and solid-gas, respectively.
I. Microfluidics
12 1. Introduction to microfluidics
w
Liquid Gas
FIG. 5 Illustration of a capillary valve created by a widening of a rectangular microchannel of width w and height h.
I. Microfluidics
2 Fluids in electrical fields 13
Pseudoplastic
n<1
.
Shear rate g [s–1]
FIG. 6 Illustration of the evolution of the shear stress as a function of the shear rate for the different class of fluids: Dilatant
(n > 1), Newtonian (n ¼ 1) and Pseudoplastic (n < 1).
I. Microfluidics
14 1. Introduction to microfluidics
where ζ is the zeta potential and D the diffusion and mobile layers corresponding to the shear
coefficient. plane. A more precise explanation taking into
account the solvent molecules can be found in
Pardon and van der Wijngaart [21].
2.2 Electrical double layer The Debye length is the characteristic thickness
For a surface in contact with a solution, the of the Debye layer and corresponds to the distance
charge of the surface will depend on the pH of over which the surface charges influence the distri-
the solution. For instance, for a glass surface bution of charges in the solution. For a monovalent
composed of silanol groups (-Si-O-H) immersed electrolyte, the Debye length is given by (47).
in water with neutral pH, the hydroxyl groups
will lose a proton and the surface will become sffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffi
Em E0 k B T
negatively charged (-Si-O). The charge imbal- λD ¼ X (47)
3
ance will be compensated by counter ions (also 10 NA e2 i c0, i z2i
called counterions) from the solution, in the
example positive ions, as presented in Fig. 7. where Em is the relative permittivity of the liquid,
This layer, also called the Debye layer or electri- E0 ¼ 8.854 1012 F m1 is the vacuum permittiv-
cal double layer (EDL), is composed of two sub- ity, kB is the Boltzmann constant, T is the temper-
layers as described by Barz and Ehrhard [20]. ature, NA ¼ 6.022 1023 J K1 is the Avogadro
The inner layer contains a fixed Stern layer number, e is the elementary charge, c0, i is the bulk
and an almost immobile shear layer. The outer concentration of the ion i (in mol L1), and zi is the
layer, called the diffusive layer, contains ions corresponding valence of this ion.
subjected to electrostatic interactions but still
mobile. The zeta potential is defined as the
potential at the interface between immobile 2.3 Electro-osmosis
If a pair of electrodes is used to apply an
Stern Shear external electric field, the counterion layer is
plane plane moved (toward the negative electrode for posi-
- + + tive counterions for example). Because of the
- + - - short distance between the molecules, the ions
+ + - +
- + +
Charged material
I. Microfluidics
2 Fluids in electrical fields 15
- - - - - - - - - - - - - - -
+ + + + + + + + + + + + + + +
+
- + - - + -
-
- - + +
+ -
+ + + + + + + + + + + + + + +
- - - - - - - - - - - - - - -
FIG. 8 Illustration of the electroosmotic flow in a microchannel between two electrodes located at each end. The flow is
driven toward the negative electrode.
pDEP nDEP
E E
a b a b
Fb m
Fa m Fb
Fa
FIG. 9 Principle of (A) pDEP and (B) nDEP. E represents the electric field, m the dipolar moment, and Fa and Fb the Coulomb
force (F ¼ qE) on each barycenter of the charges on each side of the particle.
I. Microfluidics
16 1. Introduction to microfluidics
DEP can, therefore, be used for various appli- predictable and, at low Reynolds numbers, the
cations such as cell centering [26], cell separation laminar flow regime dominates. Modifications
[27], cell sorting [28], or cell aggregate in channel dimensions or surface properties
creation [25]. can then be used to generate or stop the liquid
flow. Furthermore, liquids as well as ions, mol-
ecules, and cells can be moved or separated by
2.5 Electrowetting the use of an electric field.
Electrowetting utilizes the electric field to Most of the phenomena that occur in microflui-
modify the wettability of an electrolyte on a sur- dics are described by the equations of fluid
face. It is defined as a “change in solid- dynamics presented in this chapter. However,
electrolyte contact angle due to an applied when at least one dimension is below 100 nm, dis-
potential difference between the solid and the crete effects are predominant and define the
electrolyte” [29]. world of nanofluidics. For example, if the Debye
If we consider a dielectric of thickness d and length—the thickness of the double layer—is sim-
relative permittivity εr covering the electrode, ilar or larger than the channel size, the flow will be
the contact angle θ0 is modified (51). mostly controlled by surface charges. Addition-
ally, as channel size becomes even smaller, sur-
CV 2 face to volume effects start to be even more
γ lg cos ðθ0 Þ ¼ γ sg γ sl + (51)
2 significant. Surfaces, indeed, play a major role
in nanofluidics and surface energy is paramount.
where C ¼ εrdε0 is the capacitance of the interface In channels below 50 nm, forces between atoms
and V the applied voltage. and molecules—called van der Waals forces—
The principle is often used for electrowetting need to be considered. At this scale, for electroos-
on dielectrics (abbreviated EWOD) where the motic flows, the electrostatic forces between
base plate consists of an array of individually
surface charges and a fluid containing charged
addressable electrodes, coated with a hydropho- particles will influence the flow dynamics. Addi-
bic dielectric layer (e.g., Teflon thin film) and the tionally, density as well as charge distribution is
top plate consists of a single ground electrode, not constant and is affected by intermolecular
coated with a hydrophobic dielectric layer. The interactions. This field of nanofluidics is foreseen
space between the two plates is filled with an to open a new range of possibilities such as single-
oil phase in which water droplets are inserted molecule analysis and manipulation, following
and manipulated. This concept is now known rapid kinetics of chemical reactions.
as digital microfluidics [30] and allows for the
fluid motion to be completely automated but
has some disadvantages such as the cost of the
microfluidic chip.
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I. Microfluidics