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17 pages, 4011 KiB  
Article
High-Performance Ammonia QCM Sensor Based on SnO2 Quantum Dots/Ti3C2Tx MXene Composites at Room Temperature
by Chong Li, Ran Tao, Jinqiao Hou, Huanming Wang, Chen Fu and Jingting Luo
Nanomaterials 2024, 14(22), 1835; https://doi.org/10.3390/nano14221835 (registering DOI) - 16 Nov 2024
Abstract
Ammonia (NH3) gas is prevalent in industrial production as a health hazardous gas. Consequently, it is essential to develop a straightforward, reliable, and stable NH3 sensor capable of operating at room temperature. This paper presents an innovative approach to modifying [...] Read more.
Ammonia (NH3) gas is prevalent in industrial production as a health hazardous gas. Consequently, it is essential to develop a straightforward, reliable, and stable NH3 sensor capable of operating at room temperature. This paper presents an innovative approach to modifying SnO2 colloidal quantum dots (CQDs) on the surface of Ti3C2Tx MXene to form a heterojunction, which introduces a significant number of adsorption sites and enhances the response of the sensor. Zero-dimensional (0D) SnO2 quantum dots and two-dimensional (2D) Ti3C2Tx MXene were prepared by solvothermal and in situ etching methods, respectively. The impact of the mass ratio between two materials on the performance was assessed. The sensor based on 12 wt% Ti3C2Tx MXene/SnO2 composites demonstrates excellent performance in terms of sensitivity and response/recovery speed. Upon exposure to 50 ppm NH3, the frequency shift in the sensor is −1140 Hz, which is 5.6 times larger than that of pure Ti3C2Tx MXene and 2.8 times higher than that of SnO2 CQDs. The response/recovery time of the sensor for 10 ppm NH3 was 36/54 s, respectively. The sensor exhibited a theoretical detection limit of 73 ppb and good repeatability. Furthermore, a stable sensing performance can be maintained after 30 days. The enhanced sensor performance can be attributed to the abundant active sites provided by the accumulation/depletion layer in the Ti3C2Tx/SnO2 heterojunction, which facilitates the adsorption of oxygen molecules. This work promotes the gas sensing application of MXenes and provides a way to improve gas sensing performance. Full article
22 pages, 4823 KiB  
Article
Bioplastic’s Valorisation by Anaerobic Co-Digestion with WWTP Mixed Sludge
by María Lera, Juan Francisco Ferrer, Luis Borrás, Joaquín Serralta and Nuria Martí
Water 2024, 16(22), 3293; https://doi.org/10.3390/w16223293 (registering DOI) - 16 Nov 2024
Abstract
Bioplastics are designed to degrade at the end of their lifecycle, but effective management of their end-of-life phase and integration into existing organic waste management systems remain significant challenges. Some bioplastics decompose under anaerobic conditions, with the anaerobic digestion (AD) process being a [...] Read more.
Bioplastics are designed to degrade at the end of their lifecycle, but effective management of their end-of-life phase and integration into existing organic waste management systems remain significant challenges. Some bioplastics decompose under anaerobic conditions, with the anaerobic digestion (AD) process being a potential solution for their disposal. AD is a promising technology for valorising organic wastes, enabling biomethane production, reducing carbon footprints, and promoting product circularity. This study focuses on evaluating the continuous co-digestion of bioplastics with mixed sludge from an urban wastewater treatment plant (WWTP). Polyhydroxybutyrate (PHB) was the selected bioplastic, as various studies have reported its high and rapid degradation under anaerobic mesophilic conditions. PHB’s biodegradability under typical WWTP anaerobic digestion conditions (35 °C, 20-day retention time) was assessed in batch tests and the results indicate that PHB degradation ranged from 68 to 75%, depending on particle size. To further explore the potential of AD for PHB valorisation, the feasibility of anaerobic co-digestion of PHB with WWTP sludge was tested on a continuous laboratory scale using two digesters: a conventional digester (CSTR) and an anaerobic membrane bioreactor (AnMBR). The results indicated complete degradation of PHB, which led to higher biomethanisation percentages in both digesters, rising from 58% to 70% in the AnMBR and from 44% to 72% in the CSTR. The notable increase observed in the CSTR was attributed to changes in microbial populations that improved sludge biodegradability. Full article
(This article belongs to the Special Issue Innovations in Anaerobic Digestion Technology)
20 pages, 4034 KiB  
Article
Influence of Electrical Conductivity on Plant Growth, Nutritional Quality, and Phytochemical Properties of Kale (Brassica napus) and Collard (Brassica oleracea) Grown Using Hydroponics
by Teng Yang, Uttara Samarakoon, James Altland and Peter Ling
Agronomy 2024, 14(11), 2704; https://doi.org/10.3390/agronomy14112704 (registering DOI) - 16 Nov 2024
Abstract
Kale (Brassica napus) and collard (Brassica oleracea) are two leafy greens in the family Brassicaceae. The leaves are rich sources of numerous health-beneficial compounds and are commonly used either fresh or cooked. This study aimed to optimize the nutrient [...] Read more.
Kale (Brassica napus) and collard (Brassica oleracea) are two leafy greens in the family Brassicaceae. The leaves are rich sources of numerous health-beneficial compounds and are commonly used either fresh or cooked. This study aimed to optimize the nutrient management of kale and collard in hydroponic production for greater yield and crop quality. ‘Red Russian’ kale and ‘Flash F1’ collard were grown for 4 weeks after transplanting in a double polyethylene-plastic-covered greenhouse using a nutrient film technique (NFT) system with 18 channels. Kale and collard were alternately grown in each channel at four different electrical conductivity (EC) levels (1.2, 1.5, 1.8, and 2.1 mS·cm−1). Fresh and dry yields of kale increased linearly with increasing EC levels, while those of collard did not increase when EC was higher than 1.8 mS·cm−1. Kale leaves had significantly higher P, K, Mn, Zn, Cu, and B than the collard at all EC levels. Additionally, mineral nutrients (except N and Zn) in leaf tissue were highest at EC 1.5 and EC 1.8 in both the kale and collard. However, the changing trend of the total N and NO3- of the leaves showed a linear trend; these levels were highest under EC 2.1, followed by EC 1.8 and EC 1.5. EC levels also affected phytochemical accumulation in leaf tissue. In general, the kale leaves had significantly higher total anthocyanin, vitamin C, phenolic compounds, and glucosinolates but lower total chlorophylls and carotenoids than the collard. In addition, although EC levels affected neither the total chlorophyll or carotenoid content in kale nor glucosinolate content in either kale or collard, other important health-beneficial compounds (especially vitamin C, anthocyanin, and phenolic compounds) in kale and collard leaves reduced with the increasing EC levels. In conclusion, the kale leaf had more nutritional and phytochemical compounds than the collard. An EC level of 1.8 mS·cm−1 was the optimum EC level for the collard, while the kale yielded more at 2.1 mS·cm−1. Further investigations are needed to optimize nitrogen nutrition for hydroponically grown kale. Full article
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<p>Layout of growing channels, indicating the location of treatment replications, and border plants excluded from data collection.</p>
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<p>Daily light intensity (DLI), air temperature, and relative humidity (RH) in the greenhouse environment during the study.</p>
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<p>Effect of nutrient solution electrical conductivity (EC) on the (<b>A</b>,<b>B</b>) fresh weight (FW) and (<b>C</b>,<b>D</b>) dry weight (DW) of kale and collard leaves, measured 4 weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent the standard errors (n = 12).</p>
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<p>Effect of nutrient solution electrical conductivity (EC) on (<b>A</b>,<b>B</b>) leaf area and (<b>C</b>,<b>D</b>) nutrient deficiency symptoms of kale and collard, measured 4 weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard errors (n = 12).</p>
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<p>Effect of nutrient solution electrical conductivity (EC) in the kale and collard leaves on (<b>A</b>,<b>B</b>) net photosynthetic rate, (<b>C</b>,<b>D</b>) transpiration rate, and (<b>E</b>,<b>F</b>) water use efficiency, measured during the 1st, 2nd, 3rd, and 4th weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard error (n = 8).</p>
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<p>Effect of nutrient solution electrical conductivity (EC) in the kale and collard leaves on (<b>A</b>,<b>B</b>) leaf number, (<b>C</b>,<b>D</b>) relative chlorophyll content (SPAD), and (<b>E</b>,<b>F</b>) chlorophyll fluorescence, measured during the 1st, 2nd, 3rd, and 4th weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard error (n = 8).</p>
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<p>Macro nutrient contents, including (<b>A</b>) total nitrogen, (<b>B</b>) phosphate, (<b>C</b>) potassium, (<b>D</b>) calcium, (<b>E</b>) magnesium, and (<b>F</b>) sulfur, in nutrient solutions, measured before (pre-research) and after (post-research) a 4-week study of kale and collard grown in a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard errors (n = 4).</p>
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<p>Effect of nutrient solution electrical conductivity (EC) on the macro nutrient contents in the kale and collard leaves, including (<b>A</b>) nitrogen, (<b>B</b>) phosphorus, (<b>C</b>) potassium, (<b>D</b>) calcium, (<b>E</b>) magnesium, and (<b>F</b>) sulfur, measured 4 weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters are significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard errors (n = 12).</p>
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<p>Effect of electrical conductivity (EC) of nutrient solution on micro nutrition contents of (<b>A</b>) iron, (<b>B</b>) manganese, (<b>C</b>) zinc, (<b>D</b>) copper, (<b>E</b>) boron, and (<b>F</b>) molybdenum in the shoot part of kale and collard at 4 weeks after transplanting into a nutrient film technique hydroponic system containing nutrient solutions with EC values of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points with different letters are significantly different according to Tukey’s test (α = 0.05) under different electrical conductivities. Error bars represent the standard errors (n = 12).</p>
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<p>Effect of nutrient solution electrical conductivity (EC) on the nitrate concentration in the fresh weight (FW) of kale and collard leaves, measured 4 weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard errors (n = 12).</p>
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<p>Effect of nutrient solution electrical conductivity (EC) on the phytochemical contents in the kale and collard leaves, including (<b>A</b>) total chlorophyll, (<b>B</b>) carotenoids, (<b>C</b>) total anthocyanin, (<b>D</b>) total phenols, (<b>E</b>) vitamin C, (<b>F</b>) total glucosinolates, measured 4 weeks after transplanting into a nutrient film technique hydroponic system. The nutrient solutions had EC levels of 1.2, 1.5, 1.8, or 2.1 dS·m<sup>−1</sup>. Data points labeled with different letters indicate significant differences based on Tukey’s test (α = 0.05) across the various EC treatments. Error bars represent standard errors (n = 8).</p>
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9 pages, 1325 KiB  
Article
Extracellular Phosphate Modulation and Polyphosphate Accumulation by Corynebacterium matruchotii and Streptococcus mutans
by Debarati Ghose and Robert S. Jones
Dent. J. 2024, 12(11), 366; https://doi.org/10.3390/dj12110366 (registering DOI) - 16 Nov 2024
Viewed by 66
Abstract
(1) Background: An alternative and understudied microbial mechanism that may influence demineralization is the microbially mediated ion exchange of Ca2+ and orthophosphate (Pi), which alters the saturation state of the mineral species within the surface enamel. There is a need [...] Read more.
(1) Background: An alternative and understudied microbial mechanism that may influence demineralization is the microbially mediated ion exchange of Ca2+ and orthophosphate (Pi), which alters the saturation state of the mineral species within the surface enamel. There is a need to examine the ability of members of the oral microbiome to modulate Ca2+ and Pi, which control mineral solubility, in order to effectively evaluate mineralization therapies to improve oral health. (2) Methods: Pi uptake was measured using an ascorbic acid assay during a BHI liquid culture growth of Corynebacterium matruchotii and Streptococcus mutans for up to 20 h. The initial and endpoint medium Ca2+ levels were measured using ICP-OES. Bacterial cells were examined at different growth stages using DAPI/polyP binding emission at 525 nm to detect the presence of internalized macromolecules of polyphosphates (polyP) that could drive Pi uptake. (3) Results: C. matruchotii (p = 0.0061) substantially accumulated Pi (3.84 mmol/L), with a concomitant formation of polyP. In contrast, S. mutans did not take up Pi or accumulate polyP. No significant Ca2+ drawdown in the media was observed in either strain. (4) Conclusions: This study suggests that when examining the future efficacy of prevention technologies to improve, in vitro assays may consider including specific oral bacteria capable of substantial Pi uptake. Full article
(This article belongs to the Special Issue Updates and Highlights in Cariology)
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Figure 1
<p>A schematic diagram of the experimental workflow. (<b>A</b>). Sterile BHI was inoculated with fresh seed culture, and growth was monitored hourly at 600 nm. Over time, the concentration of available soluble orthophosphate in the medium decreases as the bacteria take up phosphate and accumulate it as polyP. Cells were aliquoted at regular intervals during growth and one aliquot was centrifuged. The supernatant was used for an ascorbate assay to determine phosphate drawdown. The second aliquot was filtered, and the filtrate was used for the analysis of calcium drawdown from the medium using ICP-OES. (<b>B</b>). The two circles show bacterial cells at an early log phase and at an early stationary phase, respectively. PolyP accumulation is significantly increased as cells transition from the exponential log phase to the stationary phase (shown as yellow chains of polyP inside blue cells). (<b>C</b>). A typical bacterial growth curve; arrows indicate the growth phases (I = early log phase and II = early stationary phase) where cells were aliquoted for polyP study. (<b>D</b>). Cells aliquoted at both the early log and early stationary phases were stained with DAPI and imaged using an inverted fluorescence microscope for the qualitative identification of polyP. (<b>E</b>). Shows a typical epifluorescence image of <span class="html-italic">C. matruchotii</span> with accumulated polyP inclusions (yellowish green).</p>
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<p>A comparison of the growth and pH changes in oral bacteria in BHI (left) and changes to P<sub>i</sub> within the growth medium in the corresponding cultures (right). (<b>A</b>) + (<b>B</b>) = <span class="html-italic">S. mutans</span>; (<b>C</b>) + (<b>D</b>) = <span class="html-italic">C. matruchotii</span>; the time period in each growth curve, which corresponds to the time between early log and early stationary growth demarcated between the blue dashed lines, was used to assess changes to P<sub>i</sub> within the growth medium. All growth studies and phosphate assays were performed in triplicate.</p>
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<p>Changes in Ca<sup>2+</sup> (<b>A</b>) and P<sub>i</sub> (<b>B</b>) in <span class="html-italic">S. mutans</span> and <span class="html-italic">C. matruchotii</span> from an early log phase to an early stationary phase in BHI. Each data point was measured in triplicate. * Indicates significant differences in ion concentrations between an early log phase and an early stationary phase at <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>(<b>A</b>–<b>D</b>) Epifluorescent images of bacterial cells stained with DAPI; (<b>A</b>) + (<b>B</b>) = <span class="html-italic">S. mutans</span>; (<b>C</b>) + (<b>D</b>) = <span class="html-italic">C. matruchotii</span>; (<b>A</b>,<b>C</b>) = cells aliquoted at early log phase of growth; (<b>B</b>,<b>D</b>) = cells aliquoted at stationary phase. Scale = 10 µm.</p>
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15 pages, 5042 KiB  
Article
A Strategy for Reliable Cargo Loading of Low-Pressure Liquid Carbon Dioxide Carriers
by Soon-Kyu Hwang, Sang-Taek Im and Jong-Kap Ahn
Energies 2024, 17(22), 5739; https://doi.org/10.3390/en17225739 (registering DOI) - 16 Nov 2024
Viewed by 166
Abstract
This study addresses the control challenges associated with loading low-pressure liquid carbon dioxide carriers (LCO2Cs), which are crucial components of the carbon capture, utilization, and storage (CCUS) chain. It explores the need for stable pressure and temperature control to prevent dry ice formation [...] Read more.
This study addresses the control challenges associated with loading low-pressure liquid carbon dioxide carriers (LCO2Cs), which are crucial components of the carbon capture, utilization, and storage (CCUS) chain. It explores the need for stable pressure and temperature control to prevent dry ice formation and ensure efficient cargo handling. The research employed HYSYS dynamic simulations to assess three different control strategies. The simulations assessed each strategy’s effectiveness in maintaining stable operating conditions and preventing risks, such as dry ice formation and valve blockages. The study concluded by examining the necessity of pressurization for safe and efficient LCO2 loading and by determining which control strategy is most effective and reliable based on the simulation outcomes. Among the three scenarios examined, Case A, which utilized two control valves, exhibited initial instability due to significant flow coefficient differences, resulting in temperature drops below the CO2 triple point and increasing the risk of dry ice formation. Case C, operating without pressurization, experienced severe pressure fluctuations and prolonged exposure to temperatures below the triple point, posing risks of valve blockages. In contrast, Case B, which uses a remote pressure-reducing valve and a control valve, demonstrated the most stable performance, effectively avoiding dry ice formation and pressure fluctuations, making it the most reliable method for safe LCO2 cargo loading. Full article
(This article belongs to the Section B3: Carbon Emission and Utilization)
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<p>Schematic diagram for loading and venting by cargo handling system [<a href="#B21-energies-17-05739" class="html-bibr">21</a>].</p>
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<p>Schematic diagram for loading and venting by cargo handling system.</p>
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<p>Phase diagram of carbon dioxide depicting key phase transitions [<a href="#B29-energies-17-05739" class="html-bibr">29</a>].</p>
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<p>Operational range and limits for the gas management system in the cargo handling process.</p>
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<p>Pressure and temperature profiles following regulation by the LLV during the loading process.</p>
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<p>Vapor pressure and temperature profiles in response to VRV operation during vapor return.</p>
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<p>Volume of LCO<sub>2</sub> accumulated in the cargo tank during the loading process.</p>
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<p>Pressure and temperature profiles following regulation by the LLV during the loading process.</p>
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<p>Vapor pressure and temperature profiles in response to VRV operation during vapor return.</p>
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<p>Volume of LCO<sub>2</sub> accumulated in the cargo tank during the loading process.</p>
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<p>Pressure and temperature profiles following regulation by the LLV during the loading process.</p>
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<p>Vapor pressure and temperature profiles in response to VRV operation during vapor return.</p>
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<p>Volume of LCO<sub>2</sub> accumulated in the cargo tank during the loading process.</p>
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<p>Experimental setup used for LCO<sub>2</sub> cargo loading tests.</p>
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14 pages, 5711 KiB  
Article
The Effect of Aging Process Conditions on the Thermal Properties of Poly(Dimethylsiloxane)-Based Silicone Rubber
by Anna Morawska-Chochół, Magdalena Szumera, Andrzej Młyniec and Kinga Pielichowska
Materials 2024, 17(22), 5608; https://doi.org/10.3390/ma17225608 (registering DOI) - 16 Nov 2024
Viewed by 103
Abstract
Silicone rubbers based on poly(dimethylsiloxane) (PDMS) are crosslinked elastomers commonly used in various branches of industry, especially as packing materials in elements for high-temperature service. In addition to high temperatures, mechanical loading may influence their structure during their work, and, as a consequence, [...] Read more.
Silicone rubbers based on poly(dimethylsiloxane) (PDMS) are crosslinked elastomers commonly used in various branches of industry, especially as packing materials in elements for high-temperature service. In addition to high temperatures, mechanical loading may influence their structure during their work, and, as a consequence, their thermal properties may change. This study’s findings on the degradation mechanism under aging conditions are not just necessary, but also crucial for their satisfactory application. The aim of the study was a detailed and comprehensive evaluation of the aging processes of commercial ELASTOSIL® LR 3842/50 A/B, considering structural changes based on thermal analysis accompanied by mass spectroscopy, X-ray analysis, and infrared spectroscopy. The aging process was carried out at 125 °C and 175 °C, without and with 11 kg of loading. The obtained results showed that the aging of PDMS increased their thermal stability. It was the most visible for PDMS aging at 175 °C under load. It was attributed to secondary crosslinking and the post-curing process. Observed changes in polymer structure did not indicate its degradation. This is a significant finding, especially considering that a temperature of 175 °C is close to the critical temperature given by the producer (180 °C), above which the use of stabilizing agents is recommended. Full article
(This article belongs to the Special Issue Advanced Rubber Composites III)
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<p>SEM image of surface: PDMS_50 with EDS analysis (<b>A</b>); PDMS_50_0_175 (<b>B</b>); PDMS_50_11_175 (<b>C</b>); SEM images of samples cross-section: PDMA_50 (<b>D</b>); PDMS_50_0_175 (<b>E</b>); PDMS_50_11_175 (<b>F</b>).</p>
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<p>TG and DTG curves for investigated samples before and after aging at 125 °C and 175 °C with and without loading.</p>
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<p>TG and DTG curves for investigated samples before and after aging at 125 °C and 175 °C with and without loading.</p>
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<p>DSC curves for fresh sample and after aging at 125 °C and 175 °C (with and without loading).</p>
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<p>TG-MS results for fresh sample and after aging at 125 °C and 175 °C (with and without loading).</p>
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<p>TG-MS results for fresh sample and after aging at 125 °C and 175 °C (with and without loading)—cross-section at 530 °C.</p>
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<p>XRD diffractogram of PDMS_50 after aging in 125 °C (<b>A</b>) and 175 °C (<b>B</b>).</p>
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<p>DSC curves of for fresh sample and after aging at 125 °C and 175 °C (with and without loading).</p>
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<p>ATR-IR spectra of PDMS after aging in 175 °C (<b>A</b>) and after aging in 125 °C compared to fresh PDMS (<b>B</b>). Second derivative of ATR-IR spectra for PDMS after aging in 175 °C (<b>C</b>), and after aging in 125 °C (<b>D</b>).</p>
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23 pages, 6586 KiB  
Article
Studies Regarding Antimicrobial Properties of Some Microbial Polyketides Derived from Monascus Strains
by Daniela Albisoru, Nicoleta Radu, Lucia Camelia Pirvu, Amalia Stefaniu, Narcisa Băbeanu, Rusandica Stoica and Dragos Paul Mihai
Antibiotics 2024, 13(11), 1092; https://doi.org/10.3390/antibiotics13111092 (registering DOI) - 16 Nov 2024
Viewed by 180
Abstract
Finding new molecules to prevent the growth of antimicrobial resistance is a hot topic for scientists worldwide. It has been reported that some raw bioproducts containing Monascus polyketides have antimicrobial activities, but extensive studies on this effect have not been conducted. In this [...] Read more.
Finding new molecules to prevent the growth of antimicrobial resistance is a hot topic for scientists worldwide. It has been reported that some raw bioproducts containing Monascus polyketides have antimicrobial activities, but extensive studies on this effect have not been conducted. In this context, our studies aimed to evaluate the antimicrobial properties of six raw bioproducts containing three classes of microbial polyketides biosynthesized by three Monascus strains through solid-state biosynthesis. As a methodology, we performed in silico predictions using programs such as PyMOL v3.0.4 and employed ESI-MS techniques to provide evidence of the presence of the six studied compounds in our bioproducts. The results obtained in silico were validated through in vitro studies using the Kirby-Bauer diffusion method on bacteria and fungi. The test performed in silico showed that Monascorubramine has the highest affinity for both Gram-positive and Gram-negative bacteria, followed by yellow polyketides such as Ankaflavin and Monascin. The estimated pharmacokinetic parameters indicated high gastrointestinal absorption and the potential to cross the blood-brain barrier for all studied compounds. However, the compounds also inhibit most enzymes involved in drug metabolism, presenting some level of toxicity. The best in vitro results were obtained for S. aureus, with an extract containing yellow Monascus polyketides. Predictions made for E. coli were validated in vitro for P. aeruginosa, S. enterica, and S. marcescens, as well as for fungi. Significant antibacterial properties were observed during this study for C. albicans, S. aureus, and fungal dermatophytes for crude bioproducts containing Monascus polyketides. In conclusion, the antimicrobial properties of Monascus polyketides were validated both in silico and in vitro. However, due to their potential toxicity, these bioproducts would be safer to use as topical formulations. Full article
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<p>Experimental study design.</p>
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<p>Molecular docking validation—superposition of predicted poses (pink) of co-crystallized inhibitors on initial conformations (green): (<b>a</b>) trimethoprim in saDHFR binding site (PDB ID: 2w9s, RMSD 0.6535 Å); (<b>b</b>) trimethoprim in ecDHFR binding site (PDB ID: 7mym, RMSD 0.3521 Å); (<b>c</b>) UCP11E in caDHFR binding site (PDB ID: 4hoe, RMSD 0.4389 Å); (<b>d</b>) trimethoprim in hDHFR binding site (PDB ID: 2w3a, RMSD 0.9559 Å).</p>
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<p>Predicted binding poses of Monascorubramine in DHFR active sites. (<b>a</b>) saDHFR; (<b>b</b>) ecDHFR; (<b>c</b>) caDHFR; (<b>d</b>) hDHFR.</p>
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<p>2D diagrams of predicted molecular interactions between Monascorubramine and active sites of DHFR homologues. (<b>a</b>) saDHFR; (<b>b</b>) ecDHFR; (<b>c</b>) caDHFR; (<b>d</b>) hDHFR.</p>
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<p>“Boiled egg” diagram illustrating the distribution of the investigated compounds in the chemical space of molecules that are absorbed in the gastrointestinal (GI) tract or passively permeate the blood–brain barrier (BBB) based on calculated WlogP (octanol/water partition coefficient) and TPSA (topological polar surface area) values. Molecules located in the “egg yolk” are predicted to passively permeate through the BBB. Molecules located in the white area are predicted to be passively absorbed in the GI tract.</p>
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<p>ESI-MS analysis of a total alcoholic extract of the following: (<b>a</b>) <span class="html-italic">Monascus purpureus</span>; (<b>b</b>) <span class="html-italic">Monascus ruber</span>; (<b>c</b>) <span class="html-italic">Monascus</span> sp. 3 <span class="html-italic">(Monascus ruber</span>; highly productive).</p>
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<p>Antibacterial properties of polyketides obtained from Monascus-derived bioproducts: (<b>a</b>) antibacterial properties for <span class="html-italic">S. aureus</span> (yellow polyketides exhibit the best activities); (<b>b</b>) antibacterial properties for <span class="html-italic">S. aureus</span> MRSA (yellow polyketides exhibit moderate activities); (<b>c</b>) antibacterial properties for <span class="html-italic">S. marcescens</span> (red polyketides exhibit the best activities); (<b>d</b>) antibacterial properties for <span class="html-italic">P. aeruginosa</span> (red polyketides exhibit moderate antimicrobial activities); (<b>e</b>) antibacterial properties for <span class="html-italic">S. enterica</span> (red polyketides exhibit local-moderate antimicrobial activities).</p>
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<p>Antibacterial properties of polyketides obtained from Monascus-derived bioproducts: (<b>a</b>) antibacterial properties for <span class="html-italic">S. aureus</span> (yellow polyketides exhibit the best activities); (<b>b</b>) antibacterial properties for <span class="html-italic">S. aureus</span> MRSA (yellow polyketides exhibit moderate activities); (<b>c</b>) antibacterial properties for <span class="html-italic">S. marcescens</span> (red polyketides exhibit the best activities); (<b>d</b>) antibacterial properties for <span class="html-italic">P. aeruginosa</span> (red polyketides exhibit moderate antimicrobial activities); (<b>e</b>) antibacterial properties for <span class="html-italic">S. enterica</span> (red polyketides exhibit local-moderate antimicrobial activities).</p>
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<p>Antifungal properties of polyketides obtained from Monascus-derived bioproducts for the following: (<b>a</b>) <span class="html-italic">Candida albicans</span>; (<b>b</b>) <span class="html-italic">S. brevicaulis</span>, (<b>c</b>) <span class="html-italic">M. gypseum</span>; (<b>d</b>) <span class="html-italic">T. mentagrophytes</span>.</p>
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<p>Flow diagram used to obtain enhanced extracts of yellow, orange, and red polyketides: (<b>a</b>) Solid-state biosynthesis of <span class="html-italic">Monascus</span> bioproducts (RYR); (<b>b</b>) Sample preparation of <span class="html-italic">Monascus</span> bioproducts for analysis; (<b>c</b>) Obtaining <span class="html-italic">Monascus</span> extract with yellow polyketides; (<b>d</b>) Obtaining <span class="html-italic">Monascus</span> extract with orange polyketides; (<b>e</b>) Obtaining <span class="html-italic">Monascus</span> extract with red polyketides.</p>
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<p>Flow diagram used to obtain enhanced extracts of yellow, orange, and red polyketides: (<b>a</b>) Solid-state biosynthesis of <span class="html-italic">Monascus</span> bioproducts (RYR); (<b>b</b>) Sample preparation of <span class="html-italic">Monascus</span> bioproducts for analysis; (<b>c</b>) Obtaining <span class="html-italic">Monascus</span> extract with yellow polyketides; (<b>d</b>) Obtaining <span class="html-italic">Monascus</span> extract with orange polyketides; (<b>e</b>) Obtaining <span class="html-italic">Monascus</span> extract with red polyketides.</p>
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20 pages, 1278 KiB  
Article
Application of Bayesian Neural Networks in Healthcare: Three Case Studies
by Lebede Ngartera, Mahamat Ali Issaka and Saralees Nadarajah
Mach. Learn. Knowl. Extr. 2024, 6(4), 2639-2658; https://doi.org/10.3390/make6040127 (registering DOI) - 16 Nov 2024
Viewed by 168
Abstract
This study aims to explore the efficacy of Bayesian Neural Networks (BNNs) in enhancing predictive modeling for healthcare applications. Advancements in artificial intelligence have significantly improved predictive modeling capabilities, with BNNs offering a probabilistic framework that addresses the inherent uncertainty and variability in [...] Read more.
This study aims to explore the efficacy of Bayesian Neural Networks (BNNs) in enhancing predictive modeling for healthcare applications. Advancements in artificial intelligence have significantly improved predictive modeling capabilities, with BNNs offering a probabilistic framework that addresses the inherent uncertainty and variability in healthcare data. This study demonstrates the real-world applicability of BNNs through three key case studies: personalized diabetes treatment, early Alzheimer’s disease detection, and predictive modeling for HbA1c levels. By leveraging the Bayesian approach, these models provide not only enhanced predictive accuracy but also uncertainty quantification, a critical factor in clinical decision making. While the findings are promising, future research should focus on optimizing scalability and integration for real-world applications. This work lays a foundation for future studies, including the development of rating scales based on BNN predictions to improve clinical outcomes. Full article
(This article belongs to the Section Network)
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<p>Distribution of residuals for BNN predictions. This histogram illustrates the distribution of prediction errors for the BNN. The x-axis indicates the difference between actual and predicted HbA1c values, while the y-axis reflects the frequency of these errors. A peak around zero implies strong predictive performance.</p>
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<p>Actual vs. predicted HbA1c levels (original units). This figure highlights the relationship between actual and predicted HbA1c levels, showcasing the effectiveness of the BNN in generating accurate predictions for patient outcomes.</p>
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<p>Calibration curve comparison: BNN vs. Logistic Regression. This figure compares the calibration of the BNN with traditional Logistic Regression, illuminating the advantages of BNNs in managing uncertainty and variability in patient responses.</p>
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<p>ROC curve comparison: BNN vs. Logistic Regression. This figure juxtaposes the ROC curves of the BNN and logistic regression models, shedding light on their performance in predicting patient outcomes.</p>
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<p>Distribution of actual vs. predicted values. This figure presents the distribution of actual and predicted values for Alzheimer’s onset, comparing the BNN, Linear Regression, and Random Forest models. It highlights how closely each model’s predictions align with actual outcomes.</p>
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<p>Residual comparison. This figure shows the residuals for each model, comparing the BNN, Linear Regression, and Random Forest. It provides insights into the bias and accuracy of the models in predicting Alzheimer’s onset.</p>
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<p>Comparative visualization of predictions from BNN, Linear Regression, and Random Forest models. The figure presents BNN prediction intervals and the prediction accuracy of each model in predicting Alzheimer’s onset.</p>
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<p>Prediction intervals for HbA1c levels. This figure shows the predicted HbA1c levels and their corresponding intervals, illustrating the uncertainty captured by the BNN.</p>
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<p>Distribution of actual vs. predicted HbA1c levels. The figure compares actual HbA1c measurements with the model’s predictions, showing strong alignment between the two.</p>
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<p>Residual plot for HbA1c predictions. This plot displays the residuals between predicted and actual HbA1c levels, providing insights into model bias and prediction precision.</p>
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30 pages, 3150 KiB  
Article
A Carbon-Particle-Supported Palladium-Based Cobalt Composite Electrocatalyst for Ethanol Oxidation Reaction (EOR)
by Keqiang Ding, Weijia Li, Mengjiao Li, Ying Bai, Xiaoxuan Liang and Hui Wang
Electrochem 2024, 5(4), 506-535; https://doi.org/10.3390/electrochem5040033 (registering DOI) - 15 Nov 2024
Viewed by 209
Abstract
For the first time, carbon-particle-supported palladium-based cobalt composite electrocatalysts (abbreviated as PdxCoy/CPs) were prepared using a calcination–hydrothermal process–hydrothermal process (denoted as CHH). The catalysts of PdxCoy/CPs prepared using CoC2O4·2H2O, [...] Read more.
For the first time, carbon-particle-supported palladium-based cobalt composite electrocatalysts (abbreviated as PdxCoy/CPs) were prepared using a calcination–hydrothermal process–hydrothermal process (denoted as CHH). The catalysts of PdxCoy/CPs prepared using CoC2O4·2H2O, (CH3COO)2Co·4H2O, and metallic cobalt were named catalyst c1, c2, and c3, respectively. For comparison, the catalyst prepared in the absence of a Co source (denoted as Pd/CP) was identified as catalyst c0. All fabricated catalysts were thoroughly characterized by XRD, EDS, XPS, and FTIR, indicating that PdO, metallic Pd, carbon particles, and a very small amount of cobalt oxide were the main components of all produced catalysts. As demonstrated by the traditional electrochemical techniques of CV and CA, the electrocatalytic performances of PdxCoy/CP towards the ethanol oxidation reaction (EOR) were significantly superior to that of Pd/CP. In particular, c1 showed an unexpected electrocatalytic activity for EOR; for instance, in the CV test, the peak f current density of EOR on catalyst c1 was 129.3 mA cm−2, being about 10.7 times larger than that measured on Pd/CP, and in the CA test, the polarized current density of EOR recorded for c1 after 7200 s was still about 2.1 mA cm−2, which was larger than that recorded for Pd/CP (0.6 mA cm−2). In the catalyst preparation process, except for the elements of C, O, Co, and Pd, no other elements were involved, which was thought to be the main contribution of this preliminary work, being very meaningful to the further exploration of Pd-based composite EOR catalysts. Full article
(This article belongs to the Collection Feature Papers in Electrochemistry)
19 pages, 1673 KiB  
Article
Impacts of Climate Change-Induced Temperature Rise on Phenology, Physiology, and Yield in Three Red Grape Cultivars: Malbec, Bonarda, and Syrah
by Deolindo L. E. Dominguez, Miguel A. Cirrincione, Leonor Deis and Liliana E. Martínez
Plants 2024, 13(22), 3219; https://doi.org/10.3390/plants13223219 (registering DOI) - 15 Nov 2024
Viewed by 229
Abstract
Climate change has significant implications for agriculture, especially in viticulture, where temperature plays a crucial role in grapevine (Vitis vinifera) growth. Mendoza’s climate is ideal for producing high-quality wines, but 21st-century climate change is expected to have negative impacts. This study [...] Read more.
Climate change has significant implications for agriculture, especially in viticulture, where temperature plays a crucial role in grapevine (Vitis vinifera) growth. Mendoza’s climate is ideal for producing high-quality wines, but 21st-century climate change is expected to have negative impacts. This study aimed to evaluate the effects of increased temperature on the phenology, physiology, and yield of Malbec, Bonarda, and Syrah. A field trial was conducted over two seasons (2019–2020 and 2020–2021) in an experimental vineyard with an active canopy heating system (+2–4 °C). Phenological stages (budburst, flowering, fruit set, veraison, harvest), shoot growth (SG), number of shoots (NS), stomatal conductance (gs), chlorophyll content (CC), chlorophyll fluorescence (CF), and water potential (ψa) were measured. Additionally, temperature, relative humidity, light intensity, and canopy temperature were recorded. Heat treatment advanced all phenological stages by approximately two weeks, increased SG and NS, and reduced gs and ψa during the hottest months. CC and CF remained unaffected. The treatment also resulted in lower yields, reduced acidity, and increased °Brix in both seasons. Overall, rising temperatures due to climate change advance the phenological phases of Malbec, Syrah, and Bonarda, leading to lower yields, higher °Brix, and lower acidity, although physiological variables remained largely unchanged. Full article
16 pages, 2702 KiB  
Article
Immobilization of Heavy Metals in Biochar Derived from Biosolids: Effect of Temperature and Carrier Gas
by Shefali Aktar, Md Afzal Hossain, Kalpit Shah, Ana Mendez, Cícero Célio de Figueiredo, Gabriel Gasco and Jorge Paz-Ferreiro
Soil Syst. 2024, 8(4), 117; https://doi.org/10.3390/soilsystems8040117 (registering DOI) - 15 Nov 2024
Viewed by 287
Abstract
Slow pyrolysis was carried out in biosolids under three different temperatures (400, 500 and 600 °C) and two different carrier gases (CO2 and N2) on a fluidized bed reactor. The total concentration, chemical fractionation, and plant availability of the heavy [...] Read more.
Slow pyrolysis was carried out in biosolids under three different temperatures (400, 500 and 600 °C) and two different carrier gases (CO2 and N2) on a fluidized bed reactor. The total concentration, chemical fractionation, and plant availability of the heavy metals in biochar were assessed by standard methods. The total concentration of Fe, Zn, Cu, Mn, Cr, Ni and Pb increased with the conversion of biosolids to biochar and with increasing pyrolysis temperature. The community’s Bureau of Reference (BCR) sequential extraction identified the migration of metals from toxic and bioavailable to potentially stable available or non-available forms at higher pyrolysis temperatures. Diethylenetriamine penta-acetic acid (DTPA)-extractable metals (Cu, Zn, Cd, Cu, Fe and Pb) were significantly lower in biochar compared to biosolids. By replacing N2 with CO2, the total metal concentration of heavy metals was significantly different for Mn, Ni, Cd, Pb and As. There were larger amounts of metals in the residual and oxidizable fractions compared to when N2 was used as a carrier gas. Consequently, the biochar produced at higher temperatures (500 and 600 °C) in the N2 environment exhibited lower potential ecological risks than in CO2 environments (69.94 and 52.16, respectively, compared to values from 75.95 to 151.38 for biochars prepared in N2). Overall, the results suggest that the higher temperature biochar can support obtaining environmentally safe biochar and can be effective in attenuating the ecological risks of biosolids. Full article
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<p>Total concentration of heavy metals (Cr, Mn, Co, Ni, Cu, Zn, Cd, Pb and As mg kg<sup>−1</sup>) in biochar produced from biosolids at three different temperatures (400 °C, 500 °C and 600 °C) in CO<sub>2</sub> and N<sub>2</sub> carrier gases. The error bars represent the standard deviation (<span class="html-italic">n</span> = 3).</p>
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<p>The percent distribution of various heavy metals in biosolids sample and biochar derived from biosolids, where F1—exchangeable; F2—reducible; F3—oxidizable; F4—residual fraction BC—Biochar produced under CO<sub>2</sub>; BN—Biochar produced under N<sub>2</sub> carrier gas at 400 °C, 500 °C and 600 °C.</p>
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<p>Principal component analyses (PCA) of total concentration heavy metal indicating 49.5% variation in PC1 and 22% variation in PC2 values were grouped according to pyrolysis conditions.</p>
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<p>Principal component analyses (PCA) of bioavailable metal concentration indicated a 34.5% variation in PC1 and a 27.1% variation in the PC2 values grouped according to pyrolysis condition.</p>
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18 pages, 4511 KiB  
Article
Spatial Variability of Soil CO2 Emissions and Microbial Communities in a Mediterranean Holm Oak Forest
by Claudia Di Bene, Loredana Canfora, Melania Migliore, Rosa Francaviglia and Roberta Farina
Forests 2024, 15(11), 2018; https://doi.org/10.3390/f15112018 (registering DOI) - 15 Nov 2024
Viewed by 210
Abstract
Forests play a key role in the global carbon (C) cycle through multiple interactions between above-ground and soil microbial communities. Deeper insights into the soil microbial composition and diversity at different spatial scales and soil depths are of paramount importance. We hypothesized that [...] Read more.
Forests play a key role in the global carbon (C) cycle through multiple interactions between above-ground and soil microbial communities. Deeper insights into the soil microbial composition and diversity at different spatial scales and soil depths are of paramount importance. We hypothesized that in a homogeneous above-ground tree cover, the heterogeneous distribution of soil microbial functional diversity and processes at the small scale is correlated with the soil’s chemical properties. From this perspective, in a typical Mediterranean holm oak (Quercus ilex L.) peri-urban forest, soil carbon dioxide (CO2) emissions were measured with soil chambers in three different plots. In each plot, to test the linkage between above-ground and below-ground communities, soil was randomly sampled along six vertical transects (0–100 cm) to investigate soil physico-chemical parameters; microbial processes, measured using Barometric Process Separation (BaPS); and structural and functional diversity, assessed using T-RFLP and qPCR Real Time analyses. The results highlighted that the high spatial variability of CO2 emissions—confirmed by the BaPS analysis—was associated with the microbial communities’ abundance (dominated by bacteria) and structural diversity (decreasing with soil depth), measured by H′ index. Bacteria showed higher variability than fungi and archaea at all depths examined. Such an insight showed the clear ecological and environmental implications of soil in the overall sustainability of the peri-urban forest system. Full article
(This article belongs to the Special Issue Soil Organic Carbon and Nutrient Cycling in the Forest Ecosystems)
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<p>Daily mean air temperature monitored in the 0–24 h (°C) (shown as black continuous line), daily mean air temperature monitored at the time of soil CO<sub>2</sub> emissions measurements between 10 and 14 h (°C) (shown as black dotted line), and daily total rainfall (mm) (shown as gray column) over the soil CO<sub>2</sub> emissions monitoring period at the Castelporziano Reserve (Rome, Italy). A period was considered “dry” when the rainfall was equal to or less than twice the mean temperature (<b>a</b>). Daily mean soil temperature (°C) (shown as black dashed line) and daily mean soil water content (%, <span class="html-italic">v</span>:<span class="html-italic">v</span>) (shown as black continuous line) measured at 10 cm and 100 cm soil depth, respectively, over the soil CO<sub>2</sub> emissions monitoring period. Black and white circles represent daily mean soil temperature and daily mean water content, respectively, monitored at the time of soil CO<sub>2</sub> emissions measurements between 10 and 14 h (°C). (<b>b</b>) Soil CO<sub>2</sub> emissions (µmol CO<sub>2</sub> m<sup>−2</sup> s<sup>−1</sup>) were measured at the site in three plots (shown as plot 1: black triangle plot 2: white circle and plot 3: white diamond) during the period 6 June to 20 November 2013 with weekly or monthly soil CO<sub>2</sub> emissions monitoring (<span class="html-italic">n</span> = 12). Values are means ± SE (showed as vertical bars) of three replicates for each plot. For each measuring date, statistically significant differences among plots are shown by asterisks according to ANOVA (<span class="html-italic">* p</span> &lt; 0.05) (<b>c</b>).</p>
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<p>BaPS parameters measured at 0–20 cm layer: soil respiration rate (<span class="html-italic">RS</span>; mg C kg<sup>−1</sup> h<sup>−1</sup>) (<b>a</b>), gross denitrification rate (<span class="html-italic">Denitr</span>; µg N kg<sup>−1</sup> h<sup>−1</sup>) (<b>b</b>), and gross nitrification rate (<span class="html-italic">Nitr</span>; µg N kg<sup>−1</sup> h<sup>−1</sup>) (<b>c</b>). Values are means ± SE (showed as vertical bars) of three replicates for each plot. <span class="html-italic">Denitr</span> rate was detected in plots 1–2, while <span class="html-italic">Nitr</span> rate was only detected in plot 3. Values not followed by the same small letter are significantly different among plots within the same soil depth, according to ANOVA (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>BaPS parameters measured at 0–20 cm layer: soil respiration rate (<span class="html-italic">RS</span>; mg C kg<sup>−1</sup> h<sup>−1</sup>) (<b>a</b>), gross denitrification rate (<span class="html-italic">Denitr</span>; µg N kg<sup>−1</sup> h<sup>−1</sup>) (<b>b</b>), and gross nitrification rate (<span class="html-italic">Nitr</span>; µg N kg<sup>−1</sup> h<sup>−1</sup>) (<b>c</b>). Values are means ± SE (showed as vertical bars) of three replicates for each plot. <span class="html-italic">Denitr</span> rate was detected in plots 1–2, while <span class="html-italic">Nitr</span> rate was only detected in plot 3. Values not followed by the same small letter are significantly different among plots within the same soil depth, according to ANOVA (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Abundance of bacteria, archaea, and fungi expressed as gene copy numbers (g<sup>−1</sup> of soil dry weight) as detected along the investigated soil depth profile (0–100 cm) in each plot (bacteria as blue line and dots, archaea as red line and dots, and fungi as green line and dots). The abundance of each microbial community represents the average value of duplicate quantifications using 16S rDNA q-PCR analysis. Gene copy numbers were expressed in scientific notation. 0E+00 and 6E+13 refer to numbers ranging from 5.83 × 10<sup>8</sup> to 5.40 × 10<sup>13</sup>.</p>
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<p>Vertical changes in numbers of bacteria, archaea, and fungi phylotypes detected along the investigated soil depth in each plot (bacteria as blue dots, archaea as red squares, and fungi as green triangles). The number of phylotypes corresponds to the number of bands on the T-RFLP profiles.</p>
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<p>Dendrograms show similarity of T-RFLP profiles using Bray–Curtis hierarchical cluster analysis along the investigated soil depth in each plot.</p>
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<p>Boxplots of diversity index (Shannon index; <span class="html-italic">H′</span>). Three different soil layers (i.e., SL, superficial layer; IL, intermediate layer; and DL, deeper layer) were discriminated according to an arbitrary analysis of soil profile. Diversity was calculated from the number and the relative peak area of bands on the T-RFLP profiles.</p>
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<p>Principal component analysis (PCA) biplot was based on soil chemical and physical parameters (pH; SOC: soil organic carbon concentration; TN: total nitrogen concentration; C/N ratio; SWC: soil water content; Soil Temp: soil temperature), microbial processes <span class="html-italic">(Rs</span>: soil respiration; <span class="html-italic">Denitr</span>: denitrification rate; <span class="html-italic">Nitr</span>: gross nitrification rate), soil CO<sub>2</sub> emissions (measured using survey soil respiration chamber), microbial abundance (<span class="html-italic">Arch</span>: Archaea abundance; <span class="html-italic">Bact</span>: bacteria abundance; <span class="html-italic">Fungi</span>: fungi abundance) and Shannon index (Arch <span class="html-italic">H′</span>: Archaea Shannon index; Bact <span class="html-italic">H′</span>: Bacteria Shannon index; Fungi <span class="html-italic">H′</span>: Fungi Shannon index). All such parameters were used as variables, while replicate plots were used as observations in the 0–20 cm soil depth. Soil chemical and physical variables are shown by black continuous arrows, microbial processes and soil CO<sub>2</sub> emissions are shown by grey heavy dotted arrows, microbial <span class="html-italic">H’</span> is shown by black heavy dotted arrows, and microbial abundance is shown by light dotted arrows. Observations are represented by black stars (plot 1), white triangles (plot 2), and white squares (plot 3). PC 1 and PC 2 axes together accounted for 77.78% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>a</b>). PCA biplot was based on soil chemical parameters, microbial abundance, and <span class="html-italic">H’</span>, which were used as variables, while soil depths were considered as observations. Observations (10: 0–10 cm, 20:10–20 cm, 40: 20–40 cm, 60: 40–60 cm, 80: 60–80 cm, 100: 80–100 cm) are represented by black circles. In plot 1, the PC 1 and PC 2 axes together accounted for 76.04% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>b</b>); in plot 2, the PC 1 and PC 2 axes together accounted for 81.22% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>c</b>); in plot 3, the PC 1 and PC 2 axes together accounted for 82.84% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>d</b>).</p>
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<p>Principal component analysis (PCA) biplot was based on soil chemical and physical parameters (pH; SOC: soil organic carbon concentration; TN: total nitrogen concentration; C/N ratio; SWC: soil water content; Soil Temp: soil temperature), microbial processes <span class="html-italic">(Rs</span>: soil respiration; <span class="html-italic">Denitr</span>: denitrification rate; <span class="html-italic">Nitr</span>: gross nitrification rate), soil CO<sub>2</sub> emissions (measured using survey soil respiration chamber), microbial abundance (<span class="html-italic">Arch</span>: Archaea abundance; <span class="html-italic">Bact</span>: bacteria abundance; <span class="html-italic">Fungi</span>: fungi abundance) and Shannon index (Arch <span class="html-italic">H′</span>: Archaea Shannon index; Bact <span class="html-italic">H′</span>: Bacteria Shannon index; Fungi <span class="html-italic">H′</span>: Fungi Shannon index). All such parameters were used as variables, while replicate plots were used as observations in the 0–20 cm soil depth. Soil chemical and physical variables are shown by black continuous arrows, microbial processes and soil CO<sub>2</sub> emissions are shown by grey heavy dotted arrows, microbial <span class="html-italic">H’</span> is shown by black heavy dotted arrows, and microbial abundance is shown by light dotted arrows. Observations are represented by black stars (plot 1), white triangles (plot 2), and white squares (plot 3). PC 1 and PC 2 axes together accounted for 77.78% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>a</b>). PCA biplot was based on soil chemical parameters, microbial abundance, and <span class="html-italic">H’</span>, which were used as variables, while soil depths were considered as observations. Observations (10: 0–10 cm, 20:10–20 cm, 40: 20–40 cm, 60: 40–60 cm, 80: 60–80 cm, 100: 80–100 cm) are represented by black circles. In plot 1, the PC 1 and PC 2 axes together accounted for 76.04% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>b</b>); in plot 2, the PC 1 and PC 2 axes together accounted for 81.22% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>c</b>); in plot 3, the PC 1 and PC 2 axes together accounted for 82.84% of the variability and were significant (<span class="html-italic">p</span> &lt; 0.05) (<b>d</b>).</p>
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23 pages, 437 KiB  
Article
On a Class of Nonlinear Waves in Microtubules
by Nikolay K. Vitanov, Alexandr Bugay and Nikolay Ustinov
Mathematics 2024, 12(22), 3578; https://doi.org/10.3390/math12223578 (registering DOI) - 15 Nov 2024
Viewed by 140
Abstract
Microtubules are the basic components of the eukaryotic cytoskeleton. We discuss a class of nonlinear waves traveling in microtubules. The waves are obtained on the basis of a kind of z-model. The model used is extended to account for (i) the possibility [...] Read more.
Microtubules are the basic components of the eukaryotic cytoskeleton. We discuss a class of nonlinear waves traveling in microtubules. The waves are obtained on the basis of a kind of z-model. The model used is extended to account for (i) the possibility for nonlinear interaction between neighboring dimers and (ii) the possibility of asymmetry in the double-well potential connected to the external electric field caused by the interaction of a dimer with all the other dimers. The model equation obtained is solved by means of the specific case of the Simple Equations Method. This specific case is denoted by SEsM(1,1), and the equation of Riccati is used as a simple equation. We obtain three kinds of waves with respect to the relation of their velocity with the specific wave velocity vc determined by the parameters of the dimer: (i) waves with v>vc, which occur when there is nonlinearity in the interaction between neighboring dimers; (ii) waves with v<vc (they occur when the interaction between neighboring dimers is described by Hooke’s law); and (iii) waves with v=vc. We devote special attention to the last kind of waves. In addition, we discuss several waves which travel in the case of the absence of friction in a microtubule system. Full article
20 pages, 2362 KiB  
Article
Machine Learning-Driven GLCM Analysis of Structural MRI for Alzheimer’s Disease Diagnosis
by Maria João Oliveira, Pedro Ribeiro and Pedro Miguel Rodrigues
Bioengineering 2024, 11(11), 1153; https://doi.org/10.3390/bioengineering11111153 (registering DOI) - 15 Nov 2024
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Abstract
Background: Alzheimer’s disease (AD) is a progressive and irreversible neurodegenerative condition that increasingly impairs cognitive functions and daily activities. Given the incurable nature of AD and its profound impact on the elderly, early diagnosis (at the mild cognitive impairment (MCI) stage) and intervention [...] Read more.
Background: Alzheimer’s disease (AD) is a progressive and irreversible neurodegenerative condition that increasingly impairs cognitive functions and daily activities. Given the incurable nature of AD and its profound impact on the elderly, early diagnosis (at the mild cognitive impairment (MCI) stage) and intervention are crucial, focusing on delaying disease progression and improving patients’ quality of life. Methods: This work aimed to develop an automatic sMRI-based method to detect AD in three different stages, namely healthy controls (CN), mild cognitive impairment (MCI), and AD itself. For such a purpose, brain sMRI images from the ADNI database were pre-processed, and a set of 22 texture statistical features from the sMRI gray-level co-occurrence matrix (GLCM) were extracted from various slices within different anatomical planes. Different combinations of features and planes were used to feed classical machine learning (cML) algorithms to analyze their discrimination power between the groups. Results: The cML algorithms achieved the following classification accuracy: 85.2% for AD vs. CN, 98.5% for AD vs. MCI, 95.1% for CN vs. MCI, and 87.1% for all vs. all. Conclusions: For the pair AD vs. MCI, the proposed model outperformed state-of-the-art imaging source studies by 0.1% and non-imaging source studies by 4.6%. These results are particularly significant in the field of AD classification, opening the door to more efficient early diagnosis in real-world settings since MCI is considered a precursor to AD. Full article
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<p>Methodology workflow diagram.</p>
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<p>Skull stripping process in SPM: (<b>a</b>) original image; (<b>b</b>) processed image.</p>
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<p>State-of-the-art comparison with the present study (best <math display="inline"><semantics> <mrow> <mi>a</mi> <mi>c</mi> <mi>c</mi> <mi>u</mi> <mi>r</mi> <mi>a</mi> <mi>c</mi> <mi>y</mi> </mrow> </semantics></math>). For reference: (Shukla et al. 2023 [<a href="#B11-bioengineering-11-01153" class="html-bibr">11</a>]), (Hussain et al. 2020 [<a href="#B22-bioengineering-11-01153" class="html-bibr">22</a>]), (Pirrone et al. 2022 [<a href="#B26-bioengineering-11-01153" class="html-bibr">26</a>]), (Lama et al. 2022 [<a href="#B14-bioengineering-11-01153" class="html-bibr">14</a>]), (Rallabandi and Seetharama 2023 [<a href="#B23-bioengineering-11-01153" class="html-bibr">23</a>]), (Rodrigues et al. 2021 [<a href="#B27-bioengineering-11-01153" class="html-bibr">27</a>]), and (Goenka et al. 2022 [<a href="#B17-bioengineering-11-01153" class="html-bibr">17</a>]).</p>
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Article
Performance and Efficiency Evaluation of a Secondary Loop Integrated Thermal Management System with a Multi-Port Valve for Electric Vehicles
by Jaehyun Bae, Jinwon Yun and Jaeyoung Han
Energies 2024, 17(22), 5729; https://doi.org/10.3390/en17225729 (registering DOI) - 15 Nov 2024
Viewed by 234
Abstract
Recently, battery electric vehicles (BEVs) have faced various technical challenges, such as reduced driving range due to ambient temperature, slow charging speeds, fire risks, and environmental regulations. This numerical study proposes an integrated thermal management system (ITMS) utilizing R290 refrigerant and a 14-way [...] Read more.
Recently, battery electric vehicles (BEVs) have faced various technical challenges, such as reduced driving range due to ambient temperature, slow charging speeds, fire risks, and environmental regulations. This numerical study proposes an integrated thermal management system (ITMS) utilizing R290 refrigerant and a 14-way valve to address these issues, proactively meeting future environmental regulations, simplifying the system, and improving efficiency. The performance evaluation was conducted under high-load operating conditions, including driving and fast charging in various environmental conditions of 35 °C and −10 °C. As a result, the driving efficiency was 4.82 km/kWh in high-temperature conditions (35 °C) and 4.69 km/kWh in low-temperature conditions (−10 °C), which demonstrated higher efficiency than the Octovalve-ITMS applied to the Tesla Model Y. Furthermore, in fast charging tests, the high voltage battery was charged from a 10% to a 90% state of charge in 26 min at 35 °C and in 31 min at −10 °C, outperforming the Octovalve-ITMS-equipped Tesla Model Y’s fast charging time of 27 min under moderate ambient conditions. This result highlights the superior fast-charging performance of the 14-way valve-based ITMS, even under high cooling load conditions. Full article
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<p>HVB internal resistance across various temperatures.</p>
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<p>The schematic diagram of the 14-way valve-based ITMS.</p>
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<p>Operating modes of the 14-way valve-based ITMS. (<b>a</b>) Mode 1: Air source heating. (<b>b</b>) Mode 4: Waste heat recovery heating. (<b>c</b>) Mode 12: Battery charging and cooling. (<b>d</b>) Mode 13: Battery and cabin cooling. (<b>e</b>) Mode 14: PE warm-up and cabin cooling.</p>
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<p>Operating modes of the 14-way valve-based ITMS. (<b>a</b>) Mode 1: Air source heating. (<b>b</b>) Mode 4: Waste heat recovery heating. (<b>c</b>) Mode 12: Battery charging and cooling. (<b>d</b>) Mode 13: Battery and cabin cooling. (<b>e</b>) Mode 14: PE warm-up and cabin cooling.</p>
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<p>Threshold-based control strategy flowchart for the 14-way valve-based ITMS.</p>
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<p>WLTP class 3 driving cycle tracking results.</p>
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<p>Temperature of BEV components (at hot climate driving).</p>
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<p>Cabin temperature and relative humidity (at hot climate driving).</p>
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<p>Power consumption of the ITMS (at hot climate driving).</p>
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<p>HVB SOC and electric efficiency (at hot climate driving).</p>
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<p>Temperature of BEV components (at cold climate driving).</p>
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<p>Cabin temperature and relative humidity (at cold climate driving).</p>
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<p>Power consumption of the ITMS (at cold climate driving).</p>
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<p>HVB SOC and electric efficiency (at cold climate driving).</p>
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<p>Charging power and current (at hot climate fast charging).</p>
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<p>HVB temperature and TMS mode (at hot climate fast charging).</p>
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<p>HVB temperature and power losses (at hot climate fast charging).</p>
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<p>Charging power and current (at cold climate fast charging).</p>
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<p>HVB temperature and TMS mode (at cold climate fast charging).</p>
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<p>HVB temperature and power losses (at cold climate fast charging).</p>
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