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Lecture 5 Slides rh.

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1 Lecture 5 Slides rh Lecture 5 Slides rh

2 Things to do with glucose… fig 14-1 Things to do with glucose… fig 14-1

3 adenosine triphosphate… ATP adenosine triphosphate… ATP

4 fig 13-11 fig 13-11

5 free energies are additive!
11kg 68kg In metabolism, it is all about the coupling mechanism riddle: how do you lift 11 kg? ans: lower a weight > 11kg! free energies are additive!

6 fig 13-9 fig 13-9

7 It takes ATP to make ATP! the preparatory phase fig 14-2 It takes ATP to make ATP! the preparatory phase fig 14-2

8 delayed gratification in glycolytic catabolism the payoff phase
fig 14-2 delayed gratification in glycolytic catabolism the payoff phase

9 Glucose catabolism around the bios… fig 14-3 Glucose catabolism around the bios… fig 14-3

10 Phosphorylation of glucose
pg 532 Phosphorylation of glucose

11 Hexokinse: an example of induced fit
fig 6-22 Hexokinse: an example of induced fit

12 Hexokinse: an example of induced fit
fig 6-22 Hexokinse: an example of induced fit

13 Isomerization of glucose 6-P
pg 532 Isomerization of glucose 6-P

14 Anomers… rh Anomers… rh

15 The structural simplicity of isomerase reaction
rh The structural simplicity of isomerase reaction

16 Phosphorylation of fructose 6-P
pg 532 Phosphorylation of fructose 6-P

17 Cleavage of fructose 1,6 bisphosphate by aldolase
pg 533 Cleavage of fructose 1,6 bisphosphate by aldolase

18 Cleavage of fructose 1,6 bisphosphate by aldolase
now have two distinct 3-carbon molecules fig 14-6 Cleavage of fructose 1,6 bisphosphate by aldolase

19 DHAP isomerization gives us 2 identical G3P
pg 534 DHAP isomerization gives us 2 identical G3P

20 Isomerase action is familiar…
same chemistry, different enzyme Isomerase action is familiar…

21 Equivalent carbons from different parts of glucose
fig 14-6 Equivalent carbons from different parts of glucose

22 A fancy redox reaction…
pg 535 A fancy redox reaction…

23 A fancy redox reaction catalyzed by GAPDH
fig 14-7 A fancy redox reaction catalyzed by GAPDH

24 The GAPDH active site fig 14-7 The GAPDH active site fig 14-7

25 Enyzme-substrate complex
fig 14-7 Enyzme-substrate complex

26 a covalent intermediate between a cysteine S and the substrate
fig 14-7 a covalent intermediate between a cysteine S and the substrate

27 The carbon molecule gets oxidized!! fig 14-7 The carbon molecule gets oxidized!! fig 14-7

28 Phosphate as a nucleophile!!??
fig 14-7 Phosphate as a nucleophile!!

29 release of the product, 1,3 BPG fig 14-7 release of the product, 1,3 BPG fig 14-7

30 Ready for more substrate…
fig 14-7 Ready for more substrate…

31 This is the product of interest!
fig 14-7 This is the product of interest!

32 Voila! Our first ATP! XX pg 537 Voila! Our first ATP! XX pg 537

33 Substrate level phosphorylation: the general idea Substrate level phosphorylation: the general idea

34 “Isomerization” of 3PG to make 2PG
“mutase” is isomerase that moves groups pg 537 Isomerization of 3PG to make 2PG

35 Making an enol form by removal of H2O
pg 538 Making an enol form by removal of H2O

36 A second substrate level phosphorylation: more ATP! pg 538 A second substrate level phosphorylation: more ATP! pg 538

37 Ta Da!!! Pyruvic acid pg 538 Ta Da!!! Pyruvic acid pg 538

38 LDH converts pyruvate to lactate, restoring the pool of NAD+ pg 547 LDH converts pyruvate to lactate, restoring the pool of NAD+ pg 547

39 Glycolysis: energy without O2
neutrophil anaerobic organisms anaerobic situations Glycolysis: energy without O2

40

41 CEOLACANTH: the Living Fossil CEOLACANTH: the Living Fossil

42 Glycolysis in action: 100 mt sprint
Usain Bolt!! Glycolysis in action: 100 mt sprint


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