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Page 1
The updated mouse universal genotyping array bioinformatic pipeline improves genetic QC in laboratory mice.
Blanchard MW, Sigmon JS, Brennan J, Ahulamibe C, Allen ME, Ardery S, Baric RS, Bell TA, Farrington J, Ciavatta D, Cruz Cisneros MC, Drushal M, Ferris MT, Fry RC, Gaines C, Gu B, Heise MT, Hock P, Hodges RA, Hulgin M, Kafri T, Lynch RM, Magnuson T, Miller DR, Murphy CEY, Nguyen DT, Noll KE, Proulx MK, Sassetti CM, Schoenrock SA, Shaw GD, Simon JM, Smith CM, Styblo M, Tarantino LM, Woo J, Pardo Manuel de Villena F. Blanchard MW, et al. Among authors: bell ta. G3 (Bethesda). 2024 Oct 7;14(10):jkae193. doi: 10.1093/g3journal/jkae193. G3 (Bethesda). 2024. PMID: 39271181 Free PMC article.
The Mouse Universal Genotyping Array: From Substrains to Subspecies.
Morgan AP, Fu CP, Kao CY, Welsh CE, Didion JP, Yadgary L, Hyacinth L, Ferris MT, Bell TA, Miller DR, Giusti-Rodriguez P, Nonneman RJ, Cook KD, Whitmire JK, Gralinski LE, Keller M, Attie AD, Churchill GA, Petkov P, Sullivan PF, Brennan JR, McMillan L, Pardo-Manuel de Villena F. Morgan AP, et al. Among authors: bell ta. G3 (Bethesda). 2015 Dec 18;6(2):263-79. doi: 10.1534/g3.115.022087. G3 (Bethesda). 2015. PMID: 26684931 Free PMC article.
Content and Performance of the MiniMUGA Genotyping Array: A New Tool To Improve Rigor and Reproducibility in Mouse Research.
Sigmon JS, Blanchard MW, Baric RS, Bell TA, Brennan J, Brockmann GA, Burks AW, Calabrese JM, Caron KM, Cheney RE, Ciavatta D, Conlon F, Darr DB, Faber J, Franklin C, Gershon TR, Gralinski L, Gu B, Gaines CH, Hagan RS, Heimsath EG, Heise MT, Hock P, Ideraabdullah F, Jennette JC, Kafri T, Kashfeen A, Kulis M, Kumar V, Linnertz C, Livraghi-Butrico A, Lloyd KCK, Lutz C, Lynch RM, Magnuson T, Matsushima GK, McMullan R, Miller DR, Mohlke KL, Moy SS, Murphy CEY, Najarian M, O'Brien L, Palmer AA, Philpot BD, Randell SH, Reinholdt L, Ren Y, Rockwood S, Rogala AR, Saraswatula A, Sassetti CM, Schisler JC, Schoenrock SA, Shaw GD, Shorter JR, Smith CM, St Pierre CL, Tarantino LM, Threadgill DW, Valdar W, Vilen BJ, Wardwell K, Whitmire JK, Williams L, Zylka MJ, Ferris MT, McMillan L, Manuel de Villena FP. Sigmon JS, et al. Among authors: bell ta. Genetics. 2020 Dec;216(4):905-930. doi: 10.1534/genetics.120.303596. Epub 2020 Oct 16. Genetics. 2020. PMID: 33067325 Free PMC article.
The Updated Mouse Universal Genotyping Array Bioinformatic Pipeline Improves Genetic QC in Laboratory Mice.
Blanchard MW, Sigmon JS, Brennan J, Ahulamibe C, Allen ME, Baric RS, Bell TA, Farrington J, Ciavatta D, Cruz Cisneros M, Drushal M, Ferris MT, Fry R, Gaines C, Gu B, Heise MT, Hodges RA, Kafri T, Lynch R, Magnuson T, Miller D, Murphy CEY, Nguyen DT, Noll KE, Proulx M, Sassetti C, Shaw GD, Simon JM, Smith C, Styblo M, Tarantino L, Woo J, Pardo Manuel de Villena F. Blanchard MW, et al. Among authors: bell ta. bioRxiv [Preprint]. 2024 Mar 3:2024.02.29.582794. doi: 10.1101/2024.02.29.582794. bioRxiv. 2024. Update in: G3 (Bethesda). 2024 Oct 7;14(10):jkae193. doi: 10.1093/g3journal/jkae193 PMID: 38464063 Free PMC article. Updated. Preprint.
Genomes of the Mouse Collaborative Cross.
Srivastava A, Morgan AP, Najarian ML, Sarsani VK, Sigmon JS, Shorter JR, Kashfeen A, McMullan RC, Williams LH, Giusti-Rodríguez P, Ferris MT, Sullivan P, Hock P, Miller DR, Bell TA, McMillan L, Churchill GA, de Villena FP. Srivastava A, et al. Among authors: bell ta. Genetics. 2017 Jun;206(2):537-556. doi: 10.1534/genetics.116.198838. Genetics. 2017. PMID: 28592495 Free PMC article.
Host-pathogen genetic interactions underlie tuberculosis susceptibility in genetically diverse mice.
Smith CM, Baker RE, Proulx MK, Mishra BB, Long JE, Park SW, Lee HN, Kiritsy MC, Bellerose MM, Olive AJ, Murphy KC, Papavinasasundaram K, Boehm FJ, Reames CJ, Meade RK, Hampton BK, Linnertz CL, Shaw GD, Hock P, Bell TA, Ehrt S, Schnappinger D, Pardo-Manuel de Villena F, Ferris MT, Ioerger TR, Sassetti CM. Smith CM, et al. Among authors: bell ta. Elife. 2022 Feb 3;11:e74419. doi: 10.7554/eLife.74419. Elife. 2022. PMID: 35112666 Free PMC article.
181 results