Abstract
The development of a reliable method of using PCR for detection of Cryptosporidium oocysts in environmental samples with oligonucleotide primers which amplify a portion of the sequence encoding the small (18S) subunit of rRNA producing a 435-bp product was demonstrated. The PCR assay was found to provide highly genus-specific detection of Cryptosporidium spp. after release of nucleic acids from oocysts by a simple freeze-thaw procedure. The assay routinely detected 1 to 10 oocysts in purified oocyst preparations, as shown by direct microscopic counts and by an immunofluorescence assay. The sensitivity of the PCR assay in some seeded environmental water samples was up to 1,000-fold lower. However, this interference was eliminated by either flow cytometry or magnetic-antibody capture. Sensitivity was also improved 10- to 1,000-fold by probing of the PCR product on dot blots with an oligonucleotide probe detected by chemiluminescence. Confirmation of the presence of Cryptosporidium oocysts in water samples from the outbreak in Milwaukee, Wis., was obtained with this technique, and PCR was found to be as sensitive as immunofluorescence for detection of oocysts in wastewater concentrates.
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- Abbaszadegan M., Gerba C. P., Rose J. B. Detection of Giardia cysts with a cDNA probe and applications to water samples. Appl Environ Microbiol. 1991 Apr;57(4):927–931. doi: 10.1128/aem.57.4.927-931.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Arrowood M. J., Sterling C. R. Isolation of Cryptosporidium oocysts and sporozoites using discontinuous sucrose and isopycnic Percoll gradients. J Parasitol. 1987 Apr;73(2):314–319. [PubMed] [Google Scholar]
- Bifulco J. M., Schaefer F. W., 3rd Antibody-magnetite method for selective concentration of Giardia lamblia cysts from water samples. Appl Environ Microbiol. 1993 Mar;59(3):772–776. doi: 10.1128/aem.59.3.772-776.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Campbell A. T., Robertson L. J., Smith H. V. Viability of Cryptosporidium parvum oocysts: correlation of in vitro excystation with inclusion or exclusion of fluorogenic vital dyes. Appl Environ Microbiol. 1992 Nov;58(11):3488–3493. doi: 10.1128/aem.58.11.3488-3493.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Cook G. C. Opportunistic parasitic infections associated with the acquired immune deficiency syndrome (AIDS): parasitology, clinical presentation, diagnosis and management. Q J Med. 1987 Dec;65(248):967–983. [PubMed] [Google Scholar]
- Current W. L., Garcia L. S. Cryptosporidiosis. Clin Microbiol Rev. 1991 Jul;4(3):325–358. doi: 10.1128/cmr.4.3.325. [DOI] [PMC free article] [PubMed] [Google Scholar]
- D'Antonio R. G., Winn R. E., Taylor J. P., Gustafson T. L., Current W. L., Rhodes M. M., Gary G. W., Jr, Zajac R. A. A waterborne outbreak of cryptosporidiosis in normal hosts. Ann Intern Med. 1985 Dec;103(6 ):886–888. doi: 10.7326/0003-4819-103-6-886. [DOI] [PubMed] [Google Scholar]
- Deng M. Y., Day S. P., Cliver D. O. Detection of hepatitis A virus in environmental samples by antigen-capture PCR. Appl Environ Microbiol. 1994 Jun;60(6):1927–1933. doi: 10.1128/aem.60.6.1927-1933.1994. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gribben J. G., Saporito L., Barber M., Blake K. W., Edwards R. M., Griffin J. D., Freedman A. S., Nadler L. M. Bone marrows of non-Hodgkin's lymphoma patients with a bcl-2 translocation can be purged of polymerase chain reaction-detectable lymphoma cells using monoclonal antibodies and immunomagnetic bead depletion. Blood. 1992 Aug 15;80(4):1083–1089. [PubMed] [Google Scholar]
- Hayes E. B., Matte T. D., O'Brien T. R., McKinley T. W., Logsdon G. S., Rose J. B., Ungar B. L., Word D. M., Pinsky P. F., Cummings M. L. Large community outbreak of cryptosporidiosis due to contamination of a filtered public water supply. N Engl J Med. 1989 May 25;320(21):1372–1376. doi: 10.1056/NEJM198905253202103. [DOI] [PubMed] [Google Scholar]
- Johnson A. M., Fielke R., Lumb R., Baverstock P. R. Phylogenetic relationships of Cryptosporidium determined by ribosomal RNA sequence comparison. Int J Parasitol. 1990 Apr;20(2):141–147. doi: 10.1016/0020-7519(90)90093-3. [DOI] [PubMed] [Google Scholar]
- Korich D. G., Mead J. R., Madore M. S., Sinclair N. A., Sterling C. R. Effects of ozone, chlorine dioxide, chlorine, and monochloramine on Cryptosporidium parvum oocyst viability. Appl Environ Microbiol. 1990 May;56(5):1423–1428. doi: 10.1128/aem.56.5.1423-1428.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Laxer M. A., Timblin B. K., Patel R. J. DNA sequences for the specific detection of Cryptosporidium parvum by the polymerase chain reaction. Am J Trop Med Hyg. 1991 Dec;45(6):688–694. doi: 10.4269/ajtmh.1991.45.688. [DOI] [PubMed] [Google Scholar]
- LeChevallier M. W., Norton W. D., Lee R. G. Occurrence of Giardia and Cryptosporidium spp. in surface water supplies. Appl Environ Microbiol. 1991 Sep;57(9):2610–2616. doi: 10.1128/aem.57.9.2610-2616.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mac Kenzie W. R., Hoxie N. J., Proctor M. E., Gradus M. S., Blair K. A., Peterson D. E., Kazmierczak J. J., Addiss D. G., Fox K. R., Rose J. B. A massive outbreak in Milwaukee of cryptosporidium infection transmitted through the public water supply. N Engl J Med. 1994 Jul 21;331(3):161–167. doi: 10.1056/NEJM199407213310304. [DOI] [PubMed] [Google Scholar]
- Mahbubani M. H., Bej A. K., Perlin M. H., Schaefer F. W., 3rd, Jakubowski W., Atlas R. M. Differentiation of Giardia duodenalis from other Giardia spp. by using polymerase chain reaction and gene probes. J Clin Microbiol. 1992 Jan;30(1):74–78. doi: 10.1128/jcm.30.1.74-78.1992. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mahbubani M. H., Bej A. K., Perlin M., Schaefer F. W., 3rd, Jakubowski W., Atlas R. M. Detection of Giardia cysts by using the polymerase chain reaction and distinguishing live from dead cysts. Appl Environ Microbiol. 1991 Dec;57(12):3456–3461. doi: 10.1128/aem.57.12.3456-3461.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Moore A. C., Herwaldt B. L., Craun G. F., Calderon R. L., Highsmith A. K., Juranek D. D. Surveillance for waterborne disease outbreaks--United States, 1991-1992. MMWR CDC Surveill Summ. 1993 Nov 19;42(5):1–22. [PubMed] [Google Scholar]
- Padmanabhan R., Corsico C. D., Howard T. H., Holter W., Fordis C. M., Willingham M., Howard B. H. Purification of transiently transfected cells by magnetic affinity cell sorting. Anal Biochem. 1988 May 1;170(2):341–348. doi: 10.1016/0003-2697(88)90640-9. [DOI] [PubMed] [Google Scholar]
- Padmanabhan R., Corsico C., Holter W., Howard T., Howard B. H. Purification of transiently transfected cells by magnetic-affinity cell sorting. J Immunogenet. 1989 Apr;16(2):91–102. doi: 10.1111/j.1744-313x.1989.tb00451.x. [DOI] [PubMed] [Google Scholar]
- Peeters J. E., Mazás E. A., Masschelein W. J., Villacorta Martiez de Maturana I., Debacker E. Effect of disinfection of drinking water with ozone or chlorine dioxide on survival of Cryptosporidium parvum oocysts. Appl Environ Microbiol. 1989 Jun;55(6):1519–1522. doi: 10.1128/aem.55.6.1519-1522.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Rose J. B., Landeen L. K., Riley K. R., Gerba C. P. Evaluation of immunofluorescence techniques for detection of Cryptosporidium oocysts and Giardia cysts from environmental samples. Appl Environ Microbiol. 1989 Dec;55(12):3189–3196. doi: 10.1128/aem.55.12.3189-3196.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Smith H. V., Rose J. B. Waterborne cryptosporidiosis. Parasitol Today. 1990 Jan;6(1):8–12. doi: 10.1016/0169-4758(90)90378-h. [DOI] [PubMed] [Google Scholar]
- Upton S. J., Tilley M., Brillhart D. B. Comparative development of Cryptosporidium parvum (Apicomplexa) in 11 continuous host cell lines. FEMS Microbiol Lett. 1994 May 15;118(3):233–236. doi: 10.1111/j.1574-6968.1994.tb06833.x. [DOI] [PubMed] [Google Scholar]
- Vesey G., Slade J. S., Byrne M., Shepherd K., Dennis P. J., Fricker C. R. Routine monitoring of Cryptosporidium oocysts in water using flow cytometry. J Appl Bacteriol. 1993 Jul;75(1):87–90. doi: 10.1111/j.1365-2672.1993.tb03413.x. [DOI] [PubMed] [Google Scholar]
- Walsh P. S., Metzger D. A., Higuchi R. Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques. 1991 Apr;10(4):506–513. [PubMed] [Google Scholar]
- Waters A. P., McCuthan T. F. Ribosomal RNA: nature's own polymerase-amplified target for diagnosis. Parasitol Today. 1990 Feb;6(2):56–59. doi: 10.1016/0169-4758(90)90071-b. [DOI] [PubMed] [Google Scholar]