JP7066837B2 - B細胞成熟抗原結合タンパク質 - Google Patents
B細胞成熟抗原結合タンパク質 Download PDFInfo
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Description
本出願は、2017年10月13日に出願された、米国仮特許出願第62/572,375号の利益を主張するものであり、該文献はその全体が引用により本明細書に組み込まれる。
本出願は、ASCIIフォーマットで電子的に提出され、参照によって本明細書に組み込まれる配列表を含んでいる。2018年10月11日に作成された上記ASCIIのコピーは、47517-722_601_SL.txtのファイル名であり、232,688バイトのサイズである。
本明細書で言及されるすべての出版物、特許、および特許出願は、あたかも個々の出版物、特許、または特許出願がそれぞれ参照により本明細書に具体的かつ個別に組み込まれるのと同じ程度にまで、参照により本明細書に組み込まれている。
本明細書で使用される用語は、特定の事例のみを記載することを目的としており、本発明を制限することを意図していない。本明細書で使用されるように、単数形「a」、「an」、および「the」は、文脈が他に明白に示していない限り、同様に複数形を含むように意図される。さらに、用語「含むこと(including)」、「含む(includes)」「有すること(having)」、「有する(has)」、「とともに(with)」、またはその変形が、詳細な記載および/または請求項のいずれかで使用される程度まで、そのような用語は、用語「含む(comprising)」に類似した方法で含まれるように意図される。
B細胞成熟抗原(BCMA、TNFRSF17、CD269)は、最終分化B細胞上で主として発現する腫瘍壊死ファミリー受容体(TNFR)スーパーファミリーに属する膜貫通タンパク質である。BCMA発現はB細胞血統に制限され、形質細胞と形質芽細胞上に存在し、およびある程度までは記憶B細胞に存在するが、末梢性のナイーブB細胞には事実上存在しない。BCMAは、多発性骨髄腫(MM)細胞、白血病細胞、およびリンパ腫細胞上で発現される。
BCMA結合タンパク質が本明細書で企図される。ある実施形態において、BCMAタンパク質中のエピトープに結合する、抗BCMA単一ドメイン抗体あるいは抗体変異体などの結合タンパク質が本明細書で提供される。いくつかの実施形態において、BCMA結合タンパク質は、SEQ ID NO:468の配列を含むヒトBCMAタンパク質に結合する。いくつかの実施形態において、BCMA結合タンパク質は、SEQ ID NO:468と比較して、切断された配列を含むヒトBCMAタンパク質に結合する。非限定的な一実施例では、BCMA結合タンパク質は、SEQ ID NO:468のアミノ酸残基5-51を含むヒトBCMAタンパク質に結合する。
本開示のBCMA結合タンパク質、例えば、抗BCMA単一ドメイン抗体は、特定の例では、キメラ抗原受容体(CAR)へ取り込まれ得る。操作された免疫エフェクター細胞、例えば、T細胞またはNK細胞は、本明細書に記載されるような抗BCMA単一ドメイン抗体を含むCARを発現するために使用可能である。1つの実施形態において、本明細書に記載されるような抗BCMA単一ドメイン抗体を含むCARは、ヒンジ領域を介して膜貫通ドメインに、さらには共刺激ドメイン、例えば、OX40、CD27、CD28、CD5、ICAM-1、LFA-1(CD11a/CD18)、ICOS(CD278)、あるいは4-1BBから得られる機能的シグナル伝達ドメインに結合される。いくつかの実施形態において、CARはさらに、4-1BBおよび/またはCD3ゼータなどの細胞内シグナル伝達ドメインをコードする配列を含む。
1つの実施形態はBCMA結合ドメインを含む多特異性タンパク質を提供し、BCMA結合ドメインは上記の実施形態のいずれか1つによるものである。いくつかの実施形態において、多特異性タンパク質は、上記の実施形態のいずれか1つにかかるBCMA結合ドメイン(抗BCMAドメイン)、CD3結合ドメイン(抗CD3ドメイン)、およびアルブミン結合ドメイン(抗ALBドメイン)を含む。いくつかの実施形態において、BCMA標的多特異性タンパク質は三重特異性タンパク質であり、三重特異性タンパク質は、H2N-(C)-(A)-(B)-COOHのドメイン順序を有する。いくつかの実施形態において、抗BCMAドメイン(抗標的ドメイン、T)、抗CD3ドメイン(C)、および抗ALBドメイン(A)は、抗CD3:抗ALB:抗BCMA(CAT)の配向にある。いくつかの実施形態において、抗BCMAドメイン(抗標的ドメイン、T)、抗CD3ドメイン(C)、および抗ALBドメイン(A)は、抗BCMA:抗ALB:抗CD3(TAC)の配向にある。
ある実施形態では、本開示のBCMA結合タンパク質は、BCMAを発現する腫瘍細胞を持っている被験体に投与されたとき、インビボで腫瘍細胞の増殖を抑制する。腫瘍細胞の増殖の抑制の測定は、当該技術分野で周知の複数の様々な方法によって判定することができる。非限定的な例は、腫瘍寸法の直接測定、切除された腫瘤の測定と対照被験体との比較、解析を強化するために同位体あるいは発光分子(例えば、ルシフェラーゼ)を使用することもあれば使用しないこともある画像処理技術(例えば、CTまたはMRI)による測定などを含む。特定の実施形態では、本開示の抗原結合剤の投与は、対照の抗原結合剤と比較して、少なくとも約10%、20%、30%、40%、50%、60%、70%、80%、90%、あるいは100%の腫瘍細胞のインビボでの増殖の抑制をもたらし、腫瘍増殖の約100%の抑制とは、腫瘍の完全寛解と消失を示す。さらなる実施形態において、本開示の抗原結合剤の投与は、対照の抗原結合剤と比較して、約50-100%、約75-100%、あるいは約90-100%の腫瘍細胞のインビボでの増殖の抑制をもたらす。さらなる実施形態において、本開示の抗原結合剤の投与は、対照の抗原結合剤と比較して、約50-60%、約60-70%、約70-80%、約80-90%、あるいは約90-100%の腫瘍細胞のインビボでの増殖の抑制をもたらす。
本明細書に記載されるBCMA結合タンパク質は、(i)アミノ酸が遺伝子コードによってコードされるものではないアミノ酸残基で置換され、(ii)成熟ポリペプチドがポリエチレングリコールなどの別の化合物で融合され、または、(iii)追加のアミノ酸がタンパク質で融合される、誘導体またはアナログを包含し、例えば、リーダーまたは分泌配列、あるいは、免疫原ドメインを遮断するための、および/または、タンパク質の精製のための配列などを包含する。
いくつかの実施形態において、本明細書に記載されるBCMA結合タンパク質をコードするポリヌクレオチド分子も提供される。いくつかの実施形態において、ポリヌクレオチド分子は、DNA構築物として提供される。他の実施形態において、ポリヌクレオチド分子は、メッセンジャーRNA転写産物として提供される。
いくつかの実施形態において、本明細書に記載されるBCMA結合タンパク質、BCMA結合タンパク質のポリペプチドをコードするポリヌクレオチドを含むベクター、またはこのベクターにより形質転換される宿主細胞、および少なくとも1つの薬学的に許容可能な担体を含む、医薬組成物も提供される。「薬学的に許容可能な担体」との用語は、限定されないが、成分の生物活性の有効性に干渉せず、および投与される患者に対して毒性ではない担体を含む。適切な薬学的担体の例は、当該技術分野で周知であり、リン酸緩衝食塩水、水、油/水エマルジョンなどのエマルジョン、様々なタイプの湿潤剤、無菌液などを含む。そのような担体は、従来の方法によって製剤することができ、適切な用量で被験体に投与することができる。好ましくは、組成物は滅菌される。これらの組成物はまた、防腐剤、乳化剤および分散剤などのアジュバントを含有し得る。微生物の作用の予防は、様々な抗菌剤および抗真菌剤を含めることによって確かなものとなり得る。さらなる実施形態は、凍結乾燥形態で包まれたか、水性媒体で包まれた、抗BCMA単一ドメイン抗体あるいはその抗原結合フラグメントなどの上記の結合タンパク質の1つ以上を提供する。
本明細書にはまた、いくつかの実施形態において、本明細書に記載されるようなBCMA結合タンパク質の投与を含む、個体の免疫系を刺激するための方法と使用が提供される。いくつかの例において、本明細書に記載されるBCMA結合タンパク質の投与は、標的抗原を発現する細胞への細胞毒性を引き起こす、および/または持続させる。いくつかの例において、標的抗原を発現する細胞は、癌細胞または腫瘍細胞、または転移性の癌細胞または腫瘍細胞である、末端分化されたB細胞である。
アミン;パルミトイルリゾキシン;パミドロニック酸;パナキシトリオール;パノミフェン;パラバクチン;パゼリプチン;ペガスパルガーゼ;ペルデシン;ペントサンポリサルフェートナトリウム;ペントスタチン;ペントロゾール;ペルフルブロン;ペルホスファミド;ペリルアルコール;フェナジノマイシン;酢酸フェニル;ホスファターゼ阻害剤;ピシバニール;塩酸ピロカルピン;ピラルビシン;ピリトレキシム;プラセチンA;プラセチンB;プラスミノゲン活性化因子阻害剤;白金複合体;白金化合物;白金トリアミン複合体;ポルフィマーナトリウム;ポルフィロマイシン;プレドニゾン;プロピルビス-アクリドン;プロスタグランジンJ2;プロテアソーム阻害剤;タンパク質Aベースの免疫モジュレーター;プロテインキナーゼC阻害剤;プロテインキナーゼC阻害剤、微細藻類;チロシンホスファターゼタンパク質阻害剤;プリンヌクレオシドホスホリラーゼ阻害剤;プルプリン;ピラゾロアクリジン;ピリドキシル化したヘモグロビン・ポリオキシエチレン抱合体;rafアンタゴニスト;ラルチトレキセド;ラモセトロン;rasファルネシルタンパク質トランスフェラーゼ阻害剤;ras阻害剤;ras-GAP阻害剤;脱メチル化レテリプチン;レニウムRe 186エチドロネート;リゾキシン;リボザイム;RIIレチンアミド;ログレチミド;ロヒツキン;ロムルチド;ロキニメックス;ラビジノンB1;ラボキシル;サフィンゴル;セイントピン;SarCNU;サルコフィトールA;サルグラモスチム;Sdi 1模倣物;セムスチン;セネスセンス由来の阻害剤1;センスオリゴヌクレオチド;シグナル伝達阻害剤;シグナル伝達モジュレーター;一本鎖抗原結合タンパク質;シゾフィラン;ソブゾキサン;ナトリウムボロカプテート;フェニル酢酸ナトリウム;サルバロル;ソマトメジン結合タンパク質;ソナーミン;スパルホシック酸;スピカマイシンD;スピロマスチン;スプレノペンチン;スポンジスタチン1;スクワラミン;幹細胞阻害剤;幹細胞分割阻害剤;スティピアミド;ストロメリシン阻害剤;サルフィノジン;超活性血管作用性小腸ペプチドアンタゴニスト;サラディスタ;スラミン;スウェインソニン;合成グリコサミノグリカン;タリムスチン;タモキシフェンメチオジド;タウロマスチン;タザロテン;テコガランナトリウム;テガフール;テルラピリウム;テロメラーゼ阻害剤;テモポルフィン;テモゾロミド;テニポシド;テトラクロロデカオキシド;テトラゾミン;サリブラスチン;チオコラリン;トロンボポイエチン;トロンボポイエチン模倣物;チマルファジン;チモポイエチン受容体アゴニスト;チモトリナン;甲状腺刺激ホルモン;スズエチルエチオプロプリン;チラパザミン;チタノセン二塩化物;トプセンチン;トレミフェン;全能性幹細胞因子;翻訳阻害剤;トレチノイン;トリアセチルウリジン;トリシビリン;トリメトレキサート;トリプトレリン;トロピセトロン;テュロステリド;チロシンキナーゼ阻害剤;チルホスチン;UBC阻害剤;ウベニメクス;尿生殖洞由来の成長阻害因子;ウロキナーゼ受容体アンタゴニスト;バプレオチド;バリオリンB;ベクターシステム、赤血球遺伝子治療薬;ベラレゾール;ベラミン;アメリカツリスガラ;ベルテポルフィン;ビノレルビン;ビンザルチン;VITAXIN(登録商標);ボロゾール;ザノテロン;ゼニプラチン;ジラスコルブ;およびジノスタチンスチマラマー。追加の抗癌剤は、5-フルオロウラシルおよびロイコボリンである。サリドマイドおよびトポイソメラーゼ阻害剤を利用する方法での使用時、これらの2つの薬剤は特に有用である。いくつかの実施形態において、本開示の抗BCMA単一ドメイン結合タンパク質は、ゲムシタビンと組み合わせて使用される。
本開示の他の実施形態に従い、インビトロまたはインビボでBCMAの発現を検出するためのキットが提供される。キットは、前述のBCMA結合タンパク質(例えば、標識された抗BCMA単一ドメイン抗体またはその抗原結合フラグメント)、および標識を検出するための1つ以上の化合物を含む。いくつかの実施形態において、標識は、蛍光標識、酵素標識、放射性標識、核磁気共鳴活性標識、発光標識、および発色団標識から成る群から選択される。
アッセイにおける、BCMAを発現する癌細胞のT細胞死滅を媒介する、TDCC(T細胞依存性細胞毒性)本開示のBCMA結合タンパク質を含む典型的な抗BCMA三重特異性ドメイン抗体の能力
Jeko1、MOLP8、およびOPM2細胞に対する、本開示に係るBCMA結合ドメインを含む精製された典型的な三重特異性抗原結合タンパク質の、結合および細胞毒性活性を評価する方法
本開示の典型的な抗BCMA多重ドメイン抗体のADCC活性
腫瘍細胞標的をBCMA発現に基づいて選択する。標的を洗浄し、計数する。6×106の標的を完全RPMI中で再懸濁し、37℃、5%のCO2で40分間、10μMのカルセイン(無水DMSO中のSigma #C1359-00UL calcein am 4mm)の最終濃度で標識する。細胞をPBS中で2回洗浄し、完全RPMI中で再懸濁し、37℃、5%のCO2で2時間インキュベートした。標識後、標的細胞を洗浄し、再計数し、ADCCアッセイでの使用のために完全RPMIにおいて0.2×106細胞/mLで再懸濁する。
本開示の典型的な抗BCMA単一ドメイン抗体のCDC活性
異種移植片腫瘍モデル
本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性を用いる、ヒトおよびカニクイザルのBCMA、CD3ε、およびアルブミンに対する親和性測定
本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質のヒトT細胞結合能力
本開示の典型的なBCMA標的三重特異性タンパク質がBCMA発現細胞に結合する能力
BCMAを発現する癌細胞のT細胞死滅を媒介する、本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質の能力
標的細胞とエフェクター細胞とのより小さな比率を用いた、BCMAを発現する癌細胞のT細胞死滅を媒介する、本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質の能力
標的細胞とエフェクター細胞とのより小さな比率を用いた、時間経過試験における、BCMAを発現する癌細胞のT細胞死滅を媒介する、本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質の能力
ヒトT細胞にBCMA発現細胞を死滅させる、本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質の能力
カニクイザルT細胞にBCMA発現細胞を死滅させる、本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質の能力
T細胞活性化の誘導の媒介における、本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質
本開示のBCMA結合タンパク質を含む典型的なBCMA標的三重特異性タンパク質の薬物動態
Claims (23)
- 単一ドメインB細胞成熟剤(BCMA)結合タンパク質であって、前記単一ドメインBCMA結合タンパク質は、相補性決定領域CDR1、CDR2、およびCDR3を含み、
ここで、
(a)CDR1は、SEQ ID NO:5、15、18、19、22、29、34、35、43、46、76、および95からなる群から選択されるアミノ酸配列を含み、
(b)CDR2は、SEQ ID NO:118、121、122、125、126、129、133、137、147、156、164、173、174、190、および203からなる群から選択されるアミノ酸配列を含み、ならびに、
(c)CDR3は、SEQ ID NO:304として記載されるアミノ酸配列を含み、
ここで、前記単一ドメインBCMA結合タンパク質は、SEQ ID NO:472として記載される配列に対して80%~99%同一である、
単一ドメインBCMA結合タンパク質。 - 前記単一ドメインBCMA結合タンパク質は、以下の式:
f1-r1-f2-r2-f3-r3-f4
を含み、
式中、r1はCDR1であり、r2はCDR2であり、および、r3はCDR3であり、ここで、f1、f2、f3、およびf4はフレームワーク残基である、請求項1に記載の単一ドメインBCMA結合タンパク質。 - 前記単一ドメインBCMA結合タンパク質は、SEQ ID NO:374、383、402、403、406、411、412、または416として記載されるアミノ酸配列を含む、請求項1に記載の単一ドメインBCMA結合タンパク質。
- f1はSEQ ID NO:461あるいは462を含む、請求項2に記載の単一ドメインBCMA結合タンパク質。
- f2はSEQ ID NO:463を含む、請求項2に記載の単一ドメインBCMA結合タンパク質。
- f3はSEQ ID NO:464あるいは465を含む、請求項2に記載の単一ドメインBCMA結合タンパク質。
- f4はSEQ ID NO:466あるいは467を含む、請求項2に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、被験体に投与されるとき、少なくとも12時間の消失半減期を有する、請求項1に記載の単一ドメインBCMA結合タンパク質。
- ヒト化された単一ドメインBCMA結合タンパク質、または親和性成熟された単一ドメインBCMA結合タンパク質である、請求項1に記載の単一ドメインBCMA結合タンパク質。
- Fcドメインをさらに含む、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 抗癌剤をさらに含む、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記抗癌剤は単一ドメインBCMA結合タンパク質に結合する、請求項11に記載の単一ドメインBCMA結合タンパク質。
- 請求項1に記載の単一ドメインBCMA結合タンパク質を含む、多特異性結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、SEQ ID NO:374、383、402、403、406、411、412、および416からなる群から選択される配列に対して少なくとも90%同一である配列を含む、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、SEQ ID NO:374、383、402、403、406、411、412、および416からなる群から選択される配列に対して少なくとも95%同一である配列を含む、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、SEQ ID NO:468として記載される配列を含むヒトBCMA結合タンパク質内のエピトープを認識する、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 単一ドメインB細胞成熟剤(BCMA)結合タンパク質であって、前記単一ドメインBCMA結合タンパク質は、相補性決定領域CDR1、CDR2、およびCDR3を含み、
ここで、CDR1は、SEQ ID NO:76のアミノ酸配列を含み、CDR2は、SEQ ID NO:190のアミノ酸配列を含み、ならびに、CDR3は、SEQ ID NO:304のアミノ酸配列を含み、ここで、前記単一ドメインBCMA結合タンパク質は、SEQ ID NO:472として記載されるアミノ酸配列に対して80%~99%同一である、
単一ドメインBCMA結合タンパク質。 - 単一ドメインB細胞成熟剤(BCMA)結合タンパク質であって、前記単一ドメインBCMA結合タンパク質は、
(i)SEQ ID NO:76の配列を含むCDR1、SEQ ID NO:190の配列を含むCDR2、およびSEQ ID NO:304の配列を含むCDR3、
(ii)SEQ ID NO:114の配列を含むCDR1、SEQ ID NO:163の配列を含むCDR2、およびSEQ ID NO:304の配列を含むCDR3、
(iii)SEQ ID NO:115の配列を含むCDR1、SEQ ID NO:163の配列を含むCDR2、およびSEQ ID NO:304の配列を含むCDR3、
(iv)SEQ ID NO:116の配列を含むCDR1、SEQ ID NO:174の配列を含むCDR2、およびSEQ ID NO:304の配列を含むCDR3、または、
(v)SEQ ID NO:117の配列を含むCDR1、SEQ ID NO:174の配列を含むCDR2、およびSEQ ID NO:304の配列を含むCDR3、
を含む、単一ドメインBCMA結合タンパク質。 - 前記単一ドメインBCMA結合タンパク質は、被験体に投与されるとき、少なくとも20時間の消失半減期を有する、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、被験体に投与されるとき、少なくとも30時間の消失半減期を有する、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、被験体に投与されるとき、少なくとも40時間の消失半減期を有する、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、被験体に投与されるとき、少なくとも50時間の消失半減期を有する、請求項1に記載の単一ドメインBCMA結合タンパク質。
- 前記単一ドメインBCMA結合タンパク質は、被験体に投与されるとき、少なくとも100時間の消失半減期を有する、請求項1に記載の単一ドメインBCMA結合タンパク質。
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