CN101955921A - 新的内切葡聚糖酶 - Google Patents
新的内切葡聚糖酶 Download PDFInfo
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- CN101955921A CN101955921A CN2009102537570A CN200910253757A CN101955921A CN 101955921 A CN101955921 A CN 101955921A CN 2009102537570 A CN2009102537570 A CN 2009102537570A CN 200910253757 A CN200910253757 A CN 200910253757A CN 101955921 A CN101955921 A CN 101955921A
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Abstract
本发明涉及新的内切葡聚糖酶。一种在洗涤剂,洗涤,纺织和造纸纸浆应用中性能良好的酶制剂,该制剂实质上由具有溶纤活性的酶组成,所述酶包含具有序列Thr Arg X3 X4 Asp Cys Cys X8 X9 X10 Cys X12 Trp X14(其中X3和X4各自分别是Trp、Tyr或Phe;X8是Arg、Lys或His;X9、X10、X12和X13各自是20个天然氨基酸残基中的任何一个)的14个残基的第一氨基酸序列和具有序列Trp Cys Cys XX4 Cys(其中XX4是20个天然氨基酸残基中的任何一个)的5个残基的第二氨基酸序列,其条件是在第一氨基酸序列中,(i)当X12是Ser时,X14不是Ser,和(ii)当X12是Gly时,X14不是A1a。
Description
本申请是申请日为1996年3月18日、申请号为96193494.8、发明名称为“新的内切葡聚糖酶”的发明专利申请的分案申请。
本发明涉及新的酶制剂,该酶制剂包含显示内切葡聚糖酶活性的酶,其在工业应用(如洗衣组合物、生物抛光(biopolishing)新制造的织物、提供纤维素织物或衣物磨损的外观和处理纸浆)中性能良好。此外,本发明涉及编码这种酶的DNA构建体、提供编码这种酶的基因的方法、产生所述酶的方法、包含这种酶的酶制剂以及这些酶在许多工业应用中的用途。
发明背景
纤维素酶或溶纤酶是涉及纤维素水解的酶。在天然纤维素的水解中,已知涉及三种主要类型的纤维素酶,即纤维二糖水解酶(1,4-β-D-葡聚糖纤维二糖水解酶EC 3.2.1.91)、内切-β-1,4-葡聚糖酶(内切1,4-β-D-葡聚糖4-葡聚糖水解酶EC 3.2.1.4)和β-葡萄糖苷酶(EC 3.2.1.21)。
纤维素酶由大量微生物(包括真菌,放线菌,粘细菌和真细菌)合成,也由植物合成。已鉴别了各种特异性的特定的内切葡聚糖酶。
溶纤酶的一种十分重要的工业用途是用来处理纤维素织物原料或织物,例如作为洗涤剂组合物或织物软化剂组合物中的组分、用于生物-抛光新织物(衣物修饰)和用于获得含纤维素织物(尤其斜纹粗棉布)的″石洗(stone-washing)″外观。在例如下列文献中提出了几种这样的处理方法:GB-A-1 368 599,EP-A-O 307 564和EP-A-O 435 876,WO 91/172431WO 91/10732,WO 91/17244,PCT/DK95/000108和PCT/DK95/00132。
溶纤酶的另一个重要的工业用途是用于纸浆处理,例如为了改善导液(drainage)或使再利用纸脱墨。
尤其是,对所论及的工业用途而言,内切葡聚糖酶(EC 3.2.1.4)构成了有意义的一组水解酶。内切葡聚糖酶催化下列键的内切水解:纤维素、纤维素衍生物(如羧基甲基纤维素和羟乙基纤维素)、地衣淀粉中的1,4-β-D-配糖键;混合的β-1,3葡聚糖(如谷类β-D-葡聚糖或木糖葡聚糖)和其它含纤维素部分的植物材料中的β-1,4键。公认的名称是内切-1,4-β-D-葡聚糖4-葡聚糖基(glucano)水解酶,本发明中使用缩写术语内切葡聚糖酶(endoglucanase)。可以参见T.-M.Enveri,″微生物纤维素酶″W.M.Fogarty,微生物酶和生物技术,应用科学出版社,p.183-224(1983);酶学方法,(1988)Vol.160,p.200-391(Wood,W.A.和Kellogg,S.T.编);Béguin,P.,″纤维素降解的分子生物学,微生物学年评(1990),Vol.44,pp.219-248;Béguin,P.和Aubert,J-P.,″纤维素的生物降解″,FEMS微生物学回顾13(1994)p.25-58;Henrissat,B.,″纤维素酶和它们与纤维素的相互作用″,纤维素(1994),Vol.1,pp.169-196。
许多出版物中已描述了真菌内切葡聚糖酶,特别是来源于例如尖镰孢、Trichoderma reesei,Trichoderma longibrachiatum,棘孢曲霉,Neocallimastix patriciarum和例如Piromyces、腐质霉属,毁丝霉属,Geotricum,青霉属,耙菌属,鬼伞属的种的那些内切葡聚糖酶。
例如,真菌内切葡聚糖酶已由下列文献描述:Sheppard P.O.,等,用保守纤维素酶家族-特异性的序列从尖镰孢克隆纤维素酶同系物cDNA,基因,(1994),vol.15,pp.163-167;Saloheimo,A.,等,″在酵母中表达的Trichoderma reesei的新小内切葡聚糖酶基因egI5″,分子微生物学,(1994)vol.13(2),pp.219-228;van Arsdell,J.N.等,(1987),Trichoderma reesei在啤酒糖酵母葡聚糖酶I的克隆,特征确定和表达,生物/技术5:60-64;M.等,(1986),″Trichoderma reesei纤维素酶基因之间的同源性:内切葡聚糖酶I基因的完整的核苷酸序列″,基因45:253 263;Saloheimo,M.等,(1988),″EGIII,一种新的Trichoderma reesei内切葡聚糖酶:基因和酶两者的鉴定″,基因63:1121;Gonzales,R.等.,″Trichoderma longibrachiatum egl1基因的克隆、序列分析和酵母表达″,应用微生物学和生物技术,(1992),vol.38,pp.370-375;Ooi,T.等棘孢曲霉纤维素酶(FI-CMCase)cDNA的克隆和序列分析″,Curr.Genet.,(1990),vol.18,pp.217 222;Ooi,T.等,编码棘孢曲霉纤维素酶(FI-CMCase)的基因的完整的核苷酸序列″,核酸研究,(1990),vol.18,No.19,P.5884;Xue,G.等,″多种厌氧瘤胃真菌Neocallimastix patriciarum纤维素酶cDNA在大肠杆菌中的克隆和表达″,J.Gen.Microbiol.,(1992),vol.138,pp.1413-1420;Xue G.等,″编码具有高内切葡聚糖酶、纤维二糖水解酶和木聚糖酶活性的三个多功能催化区的Neocallimastix patriciarum的新的多糖类水解酶cDNA(celD)″,J.Gen.Microbiol.,(1992),vol.138,pp.2397-2403;Zhou,L.等,″来源于厌氧真菌Neocallimastix patriciarum的编码模式家族内切葡聚糖酶的无内含子celB″,生物化学杂志,(1994),vol.297,pp.359 364;Dalbφge,H.和Heldt-Hansen,H.P.,″有效表达克隆真菌酶基因的新方法″,Mol.Gen.Genet.,(1994),vol.243,pp.253260;Ali,B.R.S.等,″厌氧真菌Piromyces纤维素酶和半纤维素酶构成多蛋白纤维素-结合复合物和由多基因族编码″,FEMS微生物学通讯,(1995),vol.125,No,1,pp.15′-21。此外,日本DNA数据库(公众可从Internet上获得的DDBJ数据库)包括从微紫青霉克隆的编码内切葡聚糖酶的两个DNA序列(分别由A.Koch和G.Mernitz克隆)和从灰腐质霉变种thermoidea克隆的编码内切葡聚糖酶DNA序列(由T.Uozumi克隆)。两种Macrophomina phaseolina的内切葡聚糖酶已被克隆和测序,参见Wang,H.Y.和Jones,R.W.:″植物致病真菌Macrophomina phaseolina的内切葡聚糖酶-编码基因的克隆,特征确定和功能性表达″,基因,158:125 128,1995;和Wang,H.Y.和Jones,R.W.:″从植物致病真菌Macrophomina phaseolina克隆的单一内切葡聚糖酶-编码基因″,应用和环境微生物学,61:2004-2006,1995。这些内切葡聚糖酶中的一个显示与真菌Trichoderma reesei egl3内切葡聚糖酶的高同源性,另一个显示与微生物植物病原体Pseudomonas solanacearum egl1的同源性,说明两种内切葡聚糖酶都属于糖基水解酶5族(B.Henrissat,生物化学J 280:309-316(1991))。Schauwecker F.等(1995)公开了二态真菌玉米黑粉菌的纤维素酶基因的丝-特异性(filament-specific)表达。
WO 91/17243(Nordisk A/S)公开了一种纤维素酶制剂,该制剂由与抗高度纯化的43kDa内切葡聚糖酶(得自Humicola insolens DSM1800)的抗体免疫反应性的同源内切葡聚糖酶组成。WO 91/17244(Nordisk A/S)公开了一种新的(半)纤维素降解酶,如内切葡聚糖酶、纤维二糖水解酶或β-葡糖苷酶,其可以来源于非木霉属和展齿革菌属的真菌;WO 93/2019321公开了可以从棘孢曲霉获得的内切葡聚糖酶;WO 94/21801(Genencor公司)涉及一种纤维素酶系统,该系统是从显示内切葡聚糖酶活性的Trichodermalongibrachiatum分离到的;WO 94/26880(Gist Brocades N.V.)公开了一种分离的纤维素降解酶混合物(优选地是从木霉属、Rspergillus或Disporotrichum获得的),其具有内切葡聚糖酶,纤维二糖水解酶和木糖葡聚糖酶活性;WO 95/02043(Nordisk A/S)描述了一种具有内切葡聚糖酶活性的来源于Trichoderma harzianum的酶,该酶可以用于许多目的,包括例如植物细胞壁的降解或修饰。
已知纤维素酶可以也可以不具有纤维素结合域(CBD)。CBD增加酶对包含纤维素纤维的结合,并增加酶的催化活性部分的功效。
仍然需要提供可以用于需要纤维素酶尤其是内切葡聚糖酶活性的场合的新的纤维素酶制剂。
本发明的目的是提供新的酶制剂,该酶制剂实质上在酸性、中性或碱性条件下具有溶纤活性,并在纸浆处理,织物处理和洗衣过程中或者在动物饲养中具有改进的功效,优选地是新的纤维素酶,更优选地是性能良好的内切葡聚糖酶的酶制剂,所述酶被尝试由重组技术生产或产生。
发明概述
令人惊奇地是,现已发现一组内切葡聚糖酶具有某些独特的特征,在通常使用内切葡聚糖酶的那些工业应用中性能良好。这些独特的特征可以以酶蛋白质氨基酸序列的保守区进行描述,本发明发现,具有某些保守区的溶纤酶(即显示溶纤活性的酶)在处理要洗的衣物、处理新制造的织物和处理造纸纸浆中十分有效。
因此,本发明第一方面涉及一种酶制剂,该制剂实质上由具有溶纤活性的酶组成,所述酶包含具有以下序列的由14个氨基酸残基组成的第一氨基酸序列
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp Xaa
1 2 3 4 5 6 7 8 9 10 11 12 13 14
和具有以下序列的由5个氨基酸残基组成的第二氨基酸序列
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10、12和14号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个,其条件是在第一氨基酸序列中,(i)当12号位置上的氨基酸残基是Ser时,14号位置上的氨基酸残基不是Ser,和(ii)当12号位置上的氨基酸残基是Gly时,14号位置上的氨基酸残基不是Ala。
尽管在性能良好的内切葡聚糖酶内发现其它相当显著的变异,但可清楚识别保守区的这一惊人的发现是大量真菌DNA序列研究的结果,所述DNA序列编码具有有效的溶纤(尤其是内切葡聚糖酶)活性之酶的特定氨基酸序列。
基于这一发现,开发了一种用于特异性筛选以编码本发明的酶为特征的基因组DNA或cDNA的分子方法。构建了作为其工具的三套简并引物。因此,本发明在其第二方面涉及提供编码具有上述保守区之溶纤酶基因的方法。
通过使用这种方法(即供基因组DNA PCR筛选的引物套),令人惊奇地发现编码所述酶的DNA可以从宽范围的真菌中发现,所述真菌属于分类学上很不相同的生物体,并且栖息于生态学上十分不同的小生境中。
进一步地,通过使用这一方法,发现编码所述酶核心区(催化活性区或域)而无任何连接的纤维素结合域(CBD)之DNA序列已经可能,所述酶的核心区将不通过采用基于筛选方法的常规手段来选择。发明人经实验证实CBD区与本发明的酶核心区(包括所述酶的催化活性区或域)的连接导致多域酶的功效明显改善,例如,高出50倍的功效。
因此,本发明提供了新的纤维素酶,尤其内切葡聚糖酶,以其天然形式或者同源或异源形式产生的这些酶在工业应用中具有改善的功效。
另一方面,本发明涉及新的溶纤酶制剂,该制剂是可以从分类学上的特定门(phyli)、纲、目、科、属和种产生的,例如可以从担子菌门的(Basidiomycotous)层菌纲(Hymenomycetes)、接合菌门(Zygomycota)、壶菌门(Chytridiomycota);或从纲盘菌纲(Discomycetes)、腔菌纲(腔菌纲)、不整囊菌纲(Plectomycetes);Archaeascomycetes、半子囊菌纲(Hemiascomycetes)或者从间座壳目、炭角菌目(Xylariales)、假毛球壳目(Trichosphaeriales)、黑痣菌目(Phyllachorales)或从科丛赤壳科(Nectriaeae)、粪壳科(Sordariaceae)、毛壳科(Chaetomiaceae,)、Ceratostomaceae、毛球壳科(Lasiosphaeriaceae);或从属柱孢属(Cylindrocarpon)、粘帚霉属(Gliocladium)、周刺座霉属(Volutella)、Scytalidium、顶孢霉属(Acremonium)、或从种番茄镰孢(Fusariumlycopersici)、Fusarium passiflora、腐皮镰孢(Fusarium solani)、蛇形镰孢(Fusarium anguioides)、早熟禾镰孢(Fusarium poae)、黑腐质霉(Humicola nigrescens)、灰腐质霉(Humicola grisea)产生的,尤其是实质上由包含选自以下序列的氨基酸序列的酶组成的那些:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
更具体地说,本发明的酶制剂优选地是可以从以上提到的分类学上的特定门(phyli)、纲、目、科、属和种产生的,所述的所有微生物都产生内切葡聚糖酶,该酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;在第一序列的8号位置上,氨基酸是Arg、Lys或His;在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
本发明另一方面提供了包含编码显示内切葡聚糖酶活性的酶的DNA序列之DNA构建体,所述DNA序列包含分别在SEQ ID NO:1、4、5、10、12、16和19中所示的DNA序列或者它们的类似物。
本发明也涉及包含本发明DNA构建体的重组表达载体;涉及包含本发明DNA构建体或重组表达载体的细胞;涉及产生本发明酶(例如,重组体酶)的方法;涉及通过使用本发明的酶使要洗的衣物颜色澄清的方法;涉及包含本发明的酶的洗衣组合物;涉及本发明的酶在降解或改性植物材料(例如细胞壁),处理织物原料、织物或衣物,处理纸浆中的用途;并涉及富含本发明的酶的酶制剂。
附图简要描述
图1是下列微生物的推定编码的氨基酸序列的序列对比:Acremoniumsp.(I),Volutella colletotrichoides,Crinipellis scabella,Acremonium sp.(II),Myceliophthora thermophila,Thielaviaterrestris,Macrophomina phaseolina。用Pileup程序(Feng和Doolittle 1987)(GCG包,版本8.0)产生最好的序列对比。在至少四个序列中相同的残基(方框中)在相应的氨基酸周围表示出来。
图2图2a,b,c说明在真菌界内的本文所讨论的所有微生物(其能够产生本发明的酶制剂和酶)的分类学分类。
本文使用的分类学分类基于用于:NIH数据库(Entrez 1996春天版)的系统,该系统可以从World Wide Web:(http://www3.ncbi.nlm.nih.gov/htbin/ef/entrez TAX)获得。
对未包含在Entrez数据库中的生物体的分类,使用了下列一般可获得的和世界范围内接受的参考书:
对于子囊菌纲(Ascomycetes):Eriksson,O.E.&Hawksworth,D.L.:子囊菌纲系统,vol 12(1993)。
对于担子菌纲(Basidiomycetes):Jülich,W,:担子菌纲的较高分类群,Bibliotheca Mycologia 85,485pp(1981)。
对于接合菌纲:O′Donnell,K.:培养中的接合菌纲,佐治亚大学,美国,257pp(1979)。
一般性的微生物学参考书:
Hawksworth,D.L.,Kirk,P.M.,Sutton,B.C.和Pegler,D.N.:真菌词典,国际真菌学研究所,616pp(1995);
Von Arx,J.A,:培养中形成孢子的真菌属,424pp(1981)。
迄今仍不清楚腐质霉属(Humicola)的分类学位置(implacement)。然而,粪壳目(Sordariales)广泛选择的18SRNA的研究已给出腐质霉属归于粪壳目的有力的提示(Taylor,Clausen & Oxenbφll,未发表)。此外,这些数据表明腐质霉属与蛾柱霉属(Scytalidium)一起与粪壳科、毛壳科,长喙壳科(Ceratostomataceae)和毛球壳科仅有相当远的关系。依据上述,在这里将腐质霉属和Scytalidium置于粪壳目内,科未知。
图3是推定的部分氨基酸序列的序列对比,所述序列来源于实施例5中描述的46种微生物中选择的26种。
发明详述
在本文中,术语“20种天然氨基酸残基”指通常在蛋白质中发现的20种氨基酸残基,照惯例被认为是丙氨酸(Ala或A)、缬氨酸(Val或V)、亮氨酸(Leu或L)、异亮氨酸(Ile或I)、脯氨酸(Pro或P)、苯丙氨酸(Phe或F)、色氨酸(Trp或W)、甲硫氨酸(Met或M)、甘氨酸(Gly或G)、丝氨酸(Ser或5)、苏氨酸(Thr或T)、半胱氨酸(Cys或C)、酪氨酸(Tyr或Y)、天冬酰胺(Asn或N)、谷氨酰胺(Gln或Q)、天门冬氨酸(Asp或D)、谷氨酸(Glu或E)、赖氨酸(Lys或K)、精氨酸(Arg或R)、和组氨酸(His或H)。
按照本发明,本发明提供了新的性能良好的内切葡聚糖酶,其包含保守氨基酸序列区,尤其是具有以下序列的由14个氨基酸残基组成的第一氨基酸序列
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp Xaa
1 2 3 4 5 6 7 8 9 10 11 12 13 14
和具有以下序列的由5个氨基酸残基组成的第二氨基酸序列
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10、12和14号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个,其条件是在第一氨基酸序列中,(i)当12号位置上的氨基酸残基是Ser时,14号位置上的氨基酸残基不是Ser,和(ii)当12号位置上的氨基酸残基是Gly时,14号位置上的氨基酸残基不是Ala。
优选地,本发明的酶是微生物来源的,即是可以从微生物(如真菌)获得的。
在一个优选的实施方案中,在第一序列的9号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地选自脯氨酸和苏氨酸。
在另一个优选的实施方案中,在第一序列的10号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地是丝氨酸。
在另一个优选的实施方案,在第一序列的12号位置上氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地选自丙氨酸和甘氨酸。
在另一个优选的实施方案中,在第一序列的14号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸、色氨酸、谷氨酸和天冬氨酸,优选地选自脯氨酸、苏氨酸、丝氨酸、丙氨酸、谷氨酸和天冬氨酸。
优选地,在第二序列的4号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸、色氨酸、谷氨酸和天冬氨酸,更优选地选自丙氨酸、甘氨酸和谷氨酰胺。
更优选的实施方案的例子是这样的一些,其中,在第一序列中,第3号位置上的氨基酸残基是酪氨酸;或在第4号位置上的氨基酸残基是色氨酸;或在第8号位置上的氨基酸残基是赖氨酸。
在一个特别优选的实施方案中,本发明的酶包括选自以下序列的氨基酸序列:
Thr Arg Tyr Trp Asp Cys Cys Lys Pro Ser Cys Ala Trp
1 2 3 4 5 6 7 8 9 10 11 12 13,
Thr Arg Tyr Trp Asp Cys Cys Lys Thr Ser Cys Ala Trp
1 2 3 4 5 6 7 8 9 10 11 12 13,
和
Thr Arg Tyr Trp Asp Cys Cys Lys Pro Ser Cys Gly Trp
1 2 3 4 5 6 7 8 9 10 11 12 13.
在第二方面,本发明提供了用于发现和克隆编码这种酶的基因的方法,该方法包括在标准条件下与来源于任何保守区的寡核苷酸杂交(例如PCR扩增),如图1所说明的。
一种有用的寡核苷酸包含编码包含在选自以下序列的肽中的至少五肽的核苷酸序列:
a.
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp Xaa
1 2 3 4 5 6 7 8 9 10 11 12 13 14
在3或4在号位置上的氨基酸是Trp、Tyr或Phe;在8号位置上的氨基酸是Arg、Lys或His;在9、10、12和14号位置上的氨基酸分别是20个天然氨基酸残基中的任何一个;和
b.
Trp Cys Cys Xaa Cys Tyr
1 2 3 4 5 6
在4号位置上的氨基酸是20个天然氨基酸残基中的任何一个;和
c.
Xaa Pro Gly Gly Gly Xaa Gly Xaa Phe
1 2 3 4 5 6 7 8 9
1号位置上的氨基酸是Met或Ile;6和8号位置上的氨基酸分别是Leu、Ile或Val;和
d.
Gly Cys Xaa Xaa Arg Xaa Asp Trp Xaa
1 2 3 4 5 6 7 8 9
在3号位置上的氨基酸是20个天然氨基酸残基中的任何一个;在4和6号位置上的氨基酸分别是Trp、Tyr或Phe;并且
在9号位置上的氨基酸是Phe或Met。
所述有用的寡核苷酸也包括与以上所述序列互补的核苷酸序列。
在本发明的方法的一个优选的实施方案中,所述寡核苷酸相应于选自以下PCR引物的PCR引物:
有义,
5’-CCCCAAGCTTACIA/CGITAC/TTGGGAC/TTGC/TTGC/TAAA/GA/CC-3’
反义1,
5’-CTAGTCTAGATAA/GCAIGCA/GCAA/GCACC-3’;
反义2,
CTAGTCTAGAAAIAA/G/TICCIAA/C/GICCICCICCIGG-3’;和
反义3,
5’-CTAGTCTAGAIAACCAA/GTCAA/G A/TAICG/TCC-3.
在第三方面,本发明提供了一种酶制剂,该制剂实质上由具有溶纤活性和具有发明人所发现的保守区的酶组成,该酶包含具有下列序列的由7个氨基酸序列组成的肽:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
这种酶是可以从属于担子菌门的层菌纲菌株优选地属于蘑菇目、木耳目和非褶菌目的菌株,更优选的属于黑耳科、口蘑科、鬼伞科、裂褶菌科、烟管菌科和多孔菌科的菌株,特别是属于黑耳属、毛皮伞属、层孔菌属、斑褶菇属、栓菌属、裂褶菌属和绵皮孔菌属的菌株获得的(参见图2)。
特定的例子是可以从属于黑胶耳、Crinipellis scabella、木蹄层孔菌和Spongipellis sp.的菌株,特别是可以从黑胶耳CBS 277.96、Crinipellis scabella CBS 280.96、木蹄层孔菌CBS 276.96和Spongipellis sp.CBS 283.96获得的内切葡聚糖酶。
按照布达佩斯条约,黑胶耳于1996年3月12日以保藏号CBS 277.96保藏在真菌菌种保藏中心,Oosterstraat 1,Postbus 273,NL-3740 AGBaarn,荷兰;Crinipellis scabella于1996年3月12日以保藏号CBS280.96保藏在真菌菌种保藏中心,Oosterstraat 1,Postbus 273,NL-3740 AG Baarn,荷兰;木蹄层孔菌于1996年3月12日以保藏号CBS276.96保藏在真菌菌种保藏中心,Oosterstraat 1,Postbus 273,NL-3740 AG Baarn,荷兰;Spongipellis sp.于1996年3月12日以保藏号CBS 283.96保藏在真菌菌种保藏中心,Oosterstraat 1,Postbus273,NL-3740AG Baarn,荷兰。
本发明的酶制剂是也可以从属于壶菌门的菌株,优选地属于壶菌纲的菌株,更优选地属于Spizellomycetales目的菌株,特别优选地属于Spizellomycetaceae科的菌株,尤其是属于囊壶菌属的菌株获得的。所说菌株的特定的例子是属于红根囊壶菌的菌株,尤其是红根囊壶菌CBS282.96。
按照布达佩斯条约,红根囊壶菌于1996年3月12日以保藏号CBS282.96保藏在真菌菌种保藏中心,Oosterstraat 1,Postbus 273,NL-3740 AG Baarn,荷兰。
本发明的酶制剂也可以从属于接合菌门的菌株,优选地从属于接合菌纲的菌株,更优选地从毛霉目的菌株,尤其是从属于毛霉科和枝霉科的菌株,尤其是属于根毛霉属、须霉属和刺枝霉属的菌株获得。特定菌株的例子是属于Rhizomucor pusillus,闪光须霉和弗雷生刺枝霉的菌株,特别是Rhizomucor pusillus IFO 4578、闪光须霉IFO 4814和弗雷生刺枝霉NRRL2305。
此外,本发明的酶制剂也可以从属于Archaeascomycetes、盘菌纲,半子囊菌亚纲,腔菌纲和不整囊菌纲的菌株,优选地从属于由盘菌目、斑痣盘菌目(Rhytismatales)、座囊菌目和散囊菌目的菌株获得。尤其是所述酶可以从属于葫芦霉科、粪盘菌科、斑痣盘菌科和发菌科的菌株,优选地从属于色二孢属、Microsphaeropsis、Ulospora、壳球孢属,粪盘菌属,Saccobolus、青霉属和Thermomyces的菌株获得。特定的例子是可以从以下菌株获得的酶,所述菌株是属于由棉色二孢、Microsphaeropsis sp.、Ulospora bilgramii、Aureobasidium sp.、Macrophomina phaseolina、Ascobolus stictoides、Saccobolus dilutellus、盘菌属(Peziza)、疣孢青霉、产黄青霉和Thermomyces verrucosus的菌株,特别是棉色二孢CBS274.96、Ulospora bilgramii NKBC 1444、Macrophomina phaseolina CBS281.96、Saccobolus dilutellus CBS 275.96、疣孢青霉ATCC 62396、产黄青霉ATCC 9480和Thermomyces verrucosus CBS 285.96。
按照布达佩斯条约,棉色二孢于1996年3月12日以保藏号CBS 274.96保藏在真菌菌种保藏中心;Macrophomina phaseolina于1996年3月12日以保藏号CBS 281.96保藏在真菌菌种保藏中心;Saccobolus dilutellus于1996年3月12日以保藏号CBS 275.96保藏在真菌菌种保藏中心;Thermomyces verrucosus于1996年3月12日以保藏号CBS 285.96保藏在真菌菌种保藏中心。
此外,所述酶可以从属于间座壳目、炭角菌目、假毛球壳目和黑痣菌目的菌株,优选地从属于炭角菌科、黑腐皮壳科和Phyllachoraceae的菌株,更优选地从属于由间座壳属、刺盘孢属、黑孢属、炭角菌属、Nodulisporum和孔座壳属的菌株获得。特定的菌株的例子是属于Diaporthesyngenesia、葫芦科刺盘孢、鹿角团炭角菌、Nigrospora sp.、Nodulisporum sp.和点孔座壳的菌株,特别是Diaporthe syngenesia CBS278.96、葫芦科刺盘孢ATCC 52609、Nigrospora sp.CBS 272.96、鹿角团炭角菌CBS 284,96。
按照布达佩斯条约,Diaporthe syngenesia于1996年3月12日以保藏号CBS 278.96保藏在真菌菌种保藏中心;Nigrospora sp.于1996年3月12日以保藏号CBS 272.96保藏在真菌菌种保藏中心;鹿角团炭角菌于1996年3月12日以保藏号CBS 284.96保藏在真菌菌种保藏中心。
所述酶也可从按照布达佩斯于1996年3月12日分别以保藏号CBS270.96、CBS 271.96和CBS273.96保藏在真菌菌种保藏中心的未鉴别的真菌(有丝分裂孢子的,coleomycetous)获得。
所述酶也可从以下菌株获得,所述菌株是属于柱孢属、粘帚霉属、赤壳属、周刺座霉属、粪壳属、Scytalidium、梭孢壳属、Syspastospora、Cladorrhinum、毛壳属、Myceliphthora和顶孢霉属的菌株,特别是属于Cylindrocarpon sp.、Nectria pinea、Volutella colletotrichoides、粪生粪壳、大孢粪壳、Thielavia terrestris、Thielavia thermophila、Syspastospora boninensis、Cladorrhinum foecundissimum、墙毛壳、Chaetomium virescens、Chaetomium brasiliensis、Chaetomiumcunicolorum、Myceliophthora thermophila、链孢粘帚霉、Scytalidiumthermophila和Acremonium sp的菌株,尤其是Nectria pinea CBS 279.96、Volutella colletotrichoides CBS 400.58、粪生粪壳ATCC 52644、大孢粪壳ATCC 60255、Thielavia terrestris NRRL 8126、Thielaviathermophila CBS 174.70、墙毛壳CBS 163.52、Chaetomium virescensCBS 547.75、Chaetomium brasiliensis CBS 122.65、Chaetomiumcunicolorum CBS 799.83、Syspastospora boninensis NKBC 1515、Cladorrhinum foecrundissimum ATCC 62373、Myceliophthorathermophila CBS 117.65、Scytalidium thermophila ATCC 28085、链孢粘帚霉ATCC 10523和Acremonium sp.CBS 478.94。
按照布达佩斯条约,Nectria pinea于1996年3月12日以保藏号CBS279.96保藏在真菌菌种保藏中心;Acremonium sp.于1994年9月28日以保藏号CBS 478.94保藏。
所述酶也可以从属于腐皮镰孢、蛇形镰孢、早熟禾镰孢、尖镰孢ssp.lycopersici、尖镰孢ssp.passiflora、黑腐质霉和灰腐质霉的菌株,尤其是番茄尖镰孢ssp lycopersici CBS 645.78、尖镰孢ssppassiflora CBS 744.79、腐皮镰孢IMI 107.511、蛇形镰孢IFO 4467、早熟禾镰孢ATCC 60883、黑腐质霉CBS 819.73和灰腐质霉ATCC 22726获得。应当注意灰腐质霉不同于灰腐质霉thermoidea变种。
在一个优选的实施方案中,本发明的酶制剂来源于所公开的纲、目、科、属和种,并且实质上由下述酶组成,所述酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;在第一序列的8号位置上,氨基酸是Arg、Lys或His;在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
优选地,在第一序列的9号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,更优选地选自脯氨酸和苏氨酸;在第一序列的10号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地是丝氨酸;在第一序列的12号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地选自丙氨酸和甘氨酸;在第二序列的4号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸、色氨酸、谷氨酸和天冬氨酸,更优选地选自丙氨酸、甘氨酸和谷氨酰胺。
另一方面,本发明提供了一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列和/或可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576中的质粒获得的DNA序列,或者
b)分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列的类似物或可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576中的质粒获得的DNA序列的类似物,该类似物
i)同源于分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列和/或可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576中的质粒获得的DNA序列,
ii)与分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列和/或可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM10080、DSM 10081、大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于由一种DNA序列编码的多肽,所述DNA序列包含分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列和/或可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列或可以分别从啤酒糖酵母DSM 9770、DSM10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576中的质粒获得的DNA序列编码。
按照布达佩斯条约,大肠杆菌DSM 10512已于1996年2月2日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10511已于1996年2月2日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10571已于1996年3月6日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10576已于1996年3月12日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10583已于1996年3月13日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10584已于1996年3月13日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10585已于1996年3月13日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10586已于1996年3月13日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10587已于1996年3月13日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,大肠杆菌DSM 10588已于1996年3月13日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,啤酒糖酵母DSM 9770已于1995年2月24日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)。
按照布达佩斯条约,啤酒糖酵母DSM 10082已于1995年6月30日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124Braunschweig,德国)。
按照布达佩斯条约,啤酒糖酵母DSM 10080已于1995年6月30日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124Braunschweig,德国)。
按照布达佩斯条约,啤酒糖酵母DSM 10081已于1995年6月30日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124Braunschweig,德国)。
与SEQ ID NO:1有关的本发明DNA构建体可以从毁丝霉属的菌株,特别是M.thermophila的菌株,尤其是M.thermophila CBS 117.65的DNA文库分离或者基于该文库产生。
与SEQ ID NO:4和6有关的本发明DNA构建体可以从顶孢霉属的菌株,尤其是Acremonium sp.CBS 478.94的DNA文库分离或者基于该文库产生。
与SEQ ID NO:8有关的本发明DNA构建体可以从梭孢壳属的菌株,特别是Thielavia terrestris的菌株,尤其是Thielavia terrestris NRRL8126的DNA文库分离或者基于该文库产生。
与SEQ ID NO:10有关的本发明DNA构建体可以从壳球孢属的菌株,特别是M.phaseolina的菌株,尤其是M.phaseolina CBS 281.96的DNA文库分离或者基于该文库产生。
与SEQ ID NO:12有关的本发明DNA构建体可以从毛皮伞属的菌株,特别是C.scabella的菌株,尤其是C.scabella CBS 280.96的DNA文库分离或者基于该文库产生。
与SEQ ID NO:19有关的本发明DNA构建体可以从粪壳属的菌株,特别是粪生粪壳的菌株的DNA文库分离或者基于该文库产生。
在本发明中,分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列的″类似物″意指任何编码显示内切葡聚糖酶活性的酶的DNA序列,其具有性质i)-iv)的任一或全部。
类似的DNA序列
a)可以基于分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列,采用例如本文所公开的方法,从产生具有内切葡聚糖酶活性之酶的其它或者相关(例如,相同)生物体分离;同系物可以是包含本文所示的DNA序列的DNA序列的等位变体,即经突变产生的基因的另一种形式。突变可以是沉默的(在编码的酶上无变化)或可以编码具有改变的氨基酸序列的酶;所述DNA序列的同系物也可以是属或种同系物,编码来源于另一个种的具有类似性质的酶。
b)可以基于分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列构建,例如通过引入不产生另一个由所述DNA序列编码的内切葡聚糖酶的氨基酸序列(但其相应于用于产生所述酶的生物体的密码子使用)的核苷酸取代,和能够产生一种不同的氨基酸序列的核苷酸取代。然而,在后一种情况下,氨基酸的变化优选地是次要性质的改变(其是保守氨基酸取代,不明显地影响蛋白质的折叠或活性)、小的缺失(典型地是1到约30个氨基酸);小的氨基-或羧基-末端延伸(如氨基-末端甲硫氨酸残基),至大约20-25个残基的小的接头肽或有利于纯化的小的延伸(如聚-组氨酸束,抗原表位或结合域),总的情况参见Ford等,蛋白质表达和纯化,2:95-107,1991。保守取代的例子在下列氨基酸的范围内:碱性氨基酸(如精氨酸,赖氨酸,组氨酸),酸性氨基酸(如谷氨酸和天冬氨酸),极性氨基酸(如谷氨酰胺和天冬酰胺),疏水氨基酸(如亮氨酸,异亮氨酸,缬氨酸),芳族氨基酸(如苯丙氨酸,色氨酸,酪氨酸)和小氨基酸(如甘氨酸,丙氨酸,丝氨酸,苏氨酸,甲硫氨酸)。
对本领域技术人员明显的是,可以进行这样的取代,其在对所述分子的功能关键性的区域之外,并且仍然产生活性多肽。可以按照本领域已知的方法鉴别对本发明的DNA构建体编码的多肽之活性必需的氨基酸,所述方法例如定向诱变或丙氨酸-扫描诱变(Cunningham和Wells,科学244,1081-1085,1989)。在后一技术中,在分子中的任何残基上引入突变,试验形成的突变体分子的生物学(即内切葡聚糖酶)活性,以鉴别对所说分子活性关键性的氨基酸残基。底物-酶相互作用的位点也可以通过晶体结构(由核磁共振、结晶学或光亲和性标记法之类的技术测定的)分析测定。参见例如de Vos等,科学255:306-312,1992;Smith等,分子生物学杂志.224:899-904,1992;Wlodaver等,FEBS Lett.309:59-64,1992。
由本发明的DNA构建体的DNA序列编码的内切葡聚糖酶可以包括纤维素结合域(CBD),以编码 完整酶一部分存在,或者其它来源的CBD可以引入进内切葡聚糖酶酶,由此产生酶杂合体。在本文中,术语″纤维素-结合域″应如Peter Tomme等“不溶性碳水化合物的酶促降解”中的“纤维素-结合域:分类和性质”,John N.Saddler and Michael H.Penner(编者),ACS专题研讨系列No.618,1996所定义的来理解。这一定义把120种以上的纤维素-结合域(CBD)分类成10个家族(I-X),并且其说明CBD在各种酶中发现,如纤维素酶,木聚糖酶,甘露聚糖酶,阿拉伯呋喃糖苷酶,乙酰酯酶和壳多糖酶。CBD也在藻类中发现,例如,作为-非水解多糖类-结合的红藻Porphyra purpurea蛋白质,参见Peter Tomme等,同上。然而,大多数CBD来源于纤维素酶和木聚糖酶。CBD在蛋白质的N或C末端或内部发现。酶杂合体在本领域是已知的,参见例如WO 90/00609和WO95/16782,并且可以通过将包含至少一种编码纤维素-结合域的DNA片段(其带有或不带有接头,与编码目的酶的DNA序列连接)的DNA构建体转化进宿主细胞中,并培养该宿主细胞以表达融合基因来制备。酶杂合体可以用下式来描述:
CBD-MR-X,
其中CBD是相应于至少纤维素-结合域的氨基酸序列的N-末端或C-末端区;MR是中间区(接头),和可以是化学键或者短的连接基团,这些基团优选地具有约2至100个碳原子,更优选地具有2至40碳原子;或者优选地是约2至约100个氨基酸,更优选地是2至40个氨基酸;X是由本发明的DNA序列编码的多肽的N-末端或者C-末端区。
以两种序列之间的等同性的程度测定以上i)中提及的同源性,表示第一序列和第二序列的差别。同源性可以用本领域已知的计算机程序合适地测定,例如在GCG程序包中提供的GAP(Needleman,S.B.和Wunsch,C.D.,分子生物学杂志,48:443-453,1970)。采用GAP和下列设置进行DNA序列比较:GAP产生罚分5.0和GAP延伸罚分0.3,所述DNA序列的编码区显示与分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列或者可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM 10080、DSM10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576中的质粒获得的DNA序列具有优选地至少60%,更优选地至少65%,更优选地70%,更优选地至少80%,尤其是至少90%的等同性程度。
以上ii)中提及的杂交意指在某些特点的条件下(在此后的材料和方法中详细描述),类似的DNA序列杂交到编码内切葡聚糖酶的DNA序列的相同探针上。所使用的寡核苷酸探针是相应于分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列或者可以分别从啤酒糖酵母DSM9770、DSM 10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576中的质粒获得的DNA序列之内切葡聚糖酶编码部分的DNA序列。
以两种序列之间的等同性的程度测定以上iii)中提及的同源性,表示第一序列和第二序列的差别。同源性可以用本领域已知的计算机程序合适地测定,例如在GCG程序包中提供的GAP(Needleman,S.B.和Wunsch,C.D.,分子生物学杂志,48:443-453,1970)。采用GAP和下列设置进行多肽序列比较:GAP产生罚分3.0和GAP延伸罚分0.1,类似DNA序列编码的多肽显示与包含分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列或者可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM10576中的质粒获得的DNA序列的DNA构建体所编码的酶具有优选地至少55%,更优选地至少60%,更优选地65%,更优选地至少70%,更优选地至少80%,尤其是至少90%的等同性程度。
关于以上iv)提及的性质,意指分别由从啤酒糖酵母DSM 9770、DSM10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576分离的DNA序列编码和由用所说DNA序列转化的宿主生物体产生的内切葡聚糖酶酶,或者分别由Myceliophthora thermophila、Acremonium sp.、Thielavia terrestris、Macrophomina phaseolina、Crinipellis scabella、Volutella colletotrichoides或粪生粪壳天然内切葡聚糖酶。可以用以下材料和方法部分描述的方法测定免疫学反应性。
本发明的另一方面涉及具有本发明的DNA构建体的表达载体、包含所说DNA构建体和表达载体的细胞以及产生显示内切葡聚糖酶活性之酶的方法,该方法包括在可以产生所说酶的条件下培养所说的细胞,并从培养物回收所说的酶。
本发明的另一方面涉及一种显示内切葡聚糖酶活性的酶,这种酶
a)由本发明的DNA构建体编码
b)用本发明的方法产生
c)与一种抗纯化内切葡聚糖酶的抗体是免疫学反应性的,所述内切葡聚糖酶由分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列或者可以分别从啤酒糖酵母DSM 9770、DSM 10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576中的质粒获得的DNA序列编码。
以上c)中提及的内切葡聚糖酶可以是由从啤酒糖酵母DSM 9770、DSM10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576分离的DNA序列编码和由用所说DNA序列转化的宿主生物体产生的内切葡聚糖酶,或者分别由Myceliophthorathermophila、Acremonium sp.、Thielavia terrestris、Macrophominaphaseolina、Crinipellis scabella、Volutella colletotrichoides或粪生粪壳天然相应的内切葡聚糖酶。
一般地,在本文中,术语″酶″被理解为包括成熟蛋白质或其前体形式以及其实质上具有全长酶活性的功能性片段。此外,术语″酶″旨在包括所说酶的同系物。
所述酶的同系物可以具有一个或多个氨基酸取代,缺失或者添加。这些变化优选地是次要性质的改变(其是保守氨基酸取代,不明显地影响蛋白质的折叠或活性)、小的缺失(典型地是1到约30个氨基酸);小的氨基-或羧基-末端延伸(如氨基-末端甲硫氨酸残基),多至大约20-25个残基的小的接头肽或有利于纯化的小的延伸(如聚-组氨酸束,抗原表位或结合域),总的情况参见Ford等,蛋白质表达和纯化,2:95-107,1991。保守取代的例子在下列氨基酸的范围内:碱性氨基酸(如精氨酸,赖氨酸,组氨酸),酸性的氨基酸(如谷氨酸和天冬氨酸),极性氨基酸(如谷氨酰胺和天冬酰胺),疏水氨基酸(如亮氨酸,异亮氨酸,缬氨酸),芳族氨基酸(如苯丙氨酸,色氨酸,酪氨酸)和小氨基酸(如甘氨酸,丙氨酸,丝氨酸,苏氨酸,甲硫氨酸)。
对本领域技术人员明显的是,可以进行这样的取代,其在对所述分子的功能关键性的区域之外,并且仍然产生活性酶。可以按照本领域已知的方法鉴别对本发明的DNA构建体编码的酶之活性必需的氨基酸,所述方法例如定向诱变或丙氨酸-扫描诱变(Cunningham和Wells,科学244,1081-1085,1989)。在后一技术中,在分子中的任何残基上引入突变,试验形成的突变体分子的生物学(即内切葡聚糖酶)活性,以鉴别对所说分子活性关键性的氨基酸残基。配体-受体相互作用的位点也可以通过晶体结构(由核磁共振、结晶学或光亲和性标记法之类的技术测定的)分析测定。参见例如de Vos等,1992;Smith等,1992;Wlodaver等,1992。
同系物可以是等位变体,即经突变产生的基因的另一种形式或可以是由突变基因编码的改变的酶(但具有与本发明的酶实质上相同的活性)。由此突变可以是沉默的(编码的酶无改变)或者可以编码具有改变的氨基酸序列的酶。
所述酶的同系物也可以是属或种同系物,即来源于另一物种的具有类似性质的酶。
所述酶的同系物可以通过本文描述的方法分离。
经聚合酶链反应分子筛选和克隆
使用从合适的来源(例如任何本文提及的生物体)分离的基因组DNA或者双链cDNA和基于本文公开的DNA序列和氨基酸序列制备的合成寡核苷酸引物,经聚合酶链反应(PCR)进行本发明的DNA序列的分子筛选。例如,合适的寡核苷酸引物可以是在材料和方法部分中所描述的引物。
依据众所周知的方法,在分子筛选中所产生的PCR片段可以被分离和亚克隆进合适的载体中。经例如菌落或者噬斑杂交,PCR片段可以用于筛选DNA文库。
酵母中的克隆表达
可以通过一般性的方法分离编码显示内切葡聚糖酶活性的酶的本发明的DNA序列,所述方法包括
-在合适的载体中从合适的来源(例如任何本文提及的生物体)克隆DNA文库,
-用所说的载体转化合适的酵母宿主细胞,
-在合适的条件之下培养所说宿主细胞,以表达由DNA文库中的克隆编码的任何兴趣酶,
-通过测定由这些克隆产生的酶的任何内切葡聚糖酶活性筛选阳性克隆,
-从这些克隆分离编码所述酶的DNA。
在WO 94/14953中进一步公开了一般性的方法,该文献的内容本文一并参考。筛选方法更详细的描述在以下实施例1中给出。
可以分离编码酶的DNA序列,所述分离是例如通过筛选Macrophominaphaseolina、Crinipellis scabella、粪生粪壳或Volutellacolletotrichoides的cDNA文库,并选择表达合适的酶活性(即内切葡聚糖酶活性)的克隆进行分离;或者从按照布达佩斯条约于1996年2月2日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124Braunschweig,德国)的大肠杆菌DSM 10512分离;或者从按照布达佩斯条约于1996年2月2日保藏在DSM的大肠杆菌DSM 10511分离;或者从按照布达佩斯条约于1996年3月12日保藏在DSM的大肠杆菌DSM 10576分离;或者从按照布达佩斯条约于1996年3月6日保藏在DSM的大肠杆菌DSM10571分离;或者通过筛选Myceliphthora thermophila CBS 117.65、Acremonium sp.CBS 478.94或Thielavia terrestris NRRL 8126的cDNA文库,并选择表达合适的酶活性(即内切葡聚糖酶活性)的克隆进行分离;或者从按照布达佩斯条约于1995年2月24日保藏在DSM(德意志微生物保藏中心,Mascheroder Weg 16,D-38124 Braunschweig,德国)的啤酒糖酵母DSM 9770分离;或者从按照布达佩斯条约于1995年6月30日保藏在DSM的啤酒糖酵母DSM 10082分离;或者从按照布达佩斯条约于1995年6月30日保藏在DSM的啤酒糖酵母DSM 10080分离;或者从按照布达佩斯条约于1995年6月30日保藏在DSM的啤酒糖酵母DSM 10081分离。
然后,可以用标准方法(如实施例1中所描述的)从所述克隆分离合适的DNA序列。
核酸构建体
本文使用的术语″核酸构建体″旨在指任何cDNA、基因组DNA、合成DNA或者RNA来源的核酸分子。术语″构建体″旨在指核酸区段,其可以是单链或双链,并且其可以是基于编码兴趣酶的全部或部分天然核苷酸序列。所述构建体可以含有可以不含有其它核酸区段。
编码本发明酶的核酸构建体可以是基因组或cDNA来源的,例如通过制备基因组或者cDNA文库,并按照标准技术(参见Sambrook等,1989)使用合成寡核苷酸探针经杂交筛选编码全部或部分酶的DNA序列获得。
编码酶的核酸构建体也可以用已建立的标准的方法经合成制备,所述方法例如由Beaucage和Caruthers(1981)描述的氨基亚磷酸酯方法,或Matthes等(1984)描述的方法。按照氨基亚磷酸酯方法,在例如自动DNA合成仪中合成寡核苷酸,纯化,退火,连接和在合适的载体中克隆。
此外,所述核酸构建体可以是合成和基因组,合成和cDNA或基因组和cDNA混合来源的,其是经按照标准技术连接合成、基因组或者cDNA来源的片段(相应于完整的核酸构建体的各种部分的片段)制备(以合适的方式)的。
也可以采用特定的引物经聚合酶链反应制备所述的核酸构建体,例如按照美国专利4,683,202或Saiki等(1988)描述的方法制备。
核酸构建体优选地是DNA构建体,这一术语将一直用于本说明书与权利要求书中。
重组载体
包含编码本发明的酶的DNA构建体的重组载体可以是任何易于进行DNA操作的载体,载体的选择常常取决于其所要引入的宿主细胞。这样,载体可以是自主复制载体,即作为染色体外实体存在的载体,其复制不依赖于染色体复制,例如质粒。另外,载体可以是这样一种,当其被引入宿主细胞时,整合进宿主细胞基因组,并且与其整合进的染色体一道复制。
所述载体优选地是表达载体,在其中编码本发明的酶的DNA序列可操作地连接到该DNA转录所需的附加区段上。一般来说,表达载体是来自质粒或病毒DNA的或可以包含它们的成分。术语″可操作连接″指所述区段排列得使它们对预期的目的协调起作用,例如转录在启动子开始,并且经由编码酶的DNA序列进行。
启动子可以是任何DNA序列,其在所选择的宿主细胞中显示转录活性,并且可以来源于编码与宿主细胞同源或异源的蛋白质的基因。
用于酵母宿主细胞的合适的启动子的例子包括来源于酵母糖解基因(Hitzeman等,生物化学杂志.255(1980),12073-12080;Alber和Kawasaki,分子应用遗传学杂志,1(1982),419-434)或酒精脱氢酶基因(Young等,化学品的基因工程和微生物学(Hollaender等,编者),Plenum出版社,纽约,1982)的启动子,或者TPI1(US 4,599,311)或ADH2-4c(Russell等,自然,304(1983),652-654)启动子。
用于丝状真菌细胞的合适的启动子是例如ADH3启动子(McKnight等,The EMBO J.4(1985),2093-2099)或tpiA启动子。其它有用的启动子的例子是来源于编码下列酶的基因的那些,所述酶是米曲霉TAKA淀粉酶、Rhizomucor miehei天冬氨蛋白酶、黑曲霉中性α-淀粉酶、黑曲霉酸稳定α-淀粉酶、黑曲霉或泡盛曲霉葡糖淀粉酶(gluA)、Rhizomucor miehei脂酶、米曲霉碱性蛋白酶、米曲霉磷酸丙糖异构酶或构巢曲霉乙酰胺酶。优选的是TAKA-淀粉酶和gluA启动子。
用于细菌宿主细胞的合适的启动子的例子包括嗜热脂肪芽孢杆菌生麦淀粉酶基因、地衣形芽孢杆菌α-淀粉酶基因、液解化淀粉杆菌BAN淀粉酶基因、枯草杆菌碱性蛋白酶基因或短小芽孢杆菌木糖苷酶基因的启动子或噬菌体λPR或PL启动子或者大肠杆菌lac、trp或tac启动子。
如果需要,编码本发明的酶的DNA序列也可以可操作地与合适的终止子连接。
本发明的重组载体还可以包含使得所述载体在所说的宿主细胞中复制的DNA序列。
所述载体也可以包含选择性标记,例如,其产物补充宿主细胞缺陷的基因,如编码二氢叶酸还原酶(DHFR)的基因或粟酒裂殖酵母TPI基因(由P.R.Russell,基因40,1985,pp.125-130描述)。对于丝状真菌,选择性标记包括amdS、pyrG、argB、niaD、sC。
为了引导本发明的酶进入宿主细胞的分泌途径,也可以在重组载体中包含分泌信号序列(也称作前导序列、前序列原或前序列),将分泌信号序列在正确的读框中与编码酶的DNA序列连接。分泌信号序列一般被置于编码酶的DNA序列的5′。分泌信号序列可以是通常与所述酶相关的或者可以是来源于编码另一个分泌蛋白质的基因的。
为了从酵母细胞分泌,分泌信号序列可以编码任何信号肽,该肽确保所表达的酶以有效的方向进入细胞的分泌途径。信号肽可以是天然信号肽或其功能性部分,或者其可以是合成肽。已发现合适的信号肽是α-因子信号肽(参见美国专利4,870,008),小鼠唾液淀粉酶信号肽(参见O.Hagenbuchle等,自然289 1981,pp.643-646),修饰的羧肽酶信号肽(参见L.A.Vails等,细胞48,1987,pp.887-897),酵母BAR1信号肽(参见WO 87/02670)或酵母天冬氨蛋白酶3(YAP3)信号肽(参见M.Egel-Mitani等,酵母,6,1990,pp.127-137)。
为了在酵母中有效地分泌,也可以将编码前导肽的序列插入到信号序列的下游和编码酶的DNA序列的上游。前导肽的功能在于允许所表达的酶从内质网被引导到达高尔基体,并进一步到达分泌泡以便分泌到培养基中(即酶穿过细胞壁或至少穿过细胞膜进入酵母细胞的周质空间的输出)。前导肽可以是酵母α-因子前导肽(其用途在例如US 4,546,082,EP 16 201,EP123 294,EP 123 544和EP 163 529中描述)。另外,前导肽可以是合成的前导肽,这就是说前导肽不是天然发现的。合成的前导肽可以按照例如WO 89/02463或WO 92/11378中的描述构建。
对于在丝状真菌中的使用,所述信号肽可以方便地来源于编码Aspergillus sp.淀粉酶或葡糖淀粉酶的基因,编码Rhizomucor miehei脂酶或蛋白酶,Humicola lanuginosa脂酶的基因。所述信号肽优选地是来源于编码米曲霉TAKA淀粉酶,黑曲霉中性α-淀粉酶,黑曲霉酸-稳定淀粉酶或黑曲霉葡糖淀粉酶的基因。
分别用于连接编码所述酶的DNA序列、启动子以及可操作的终止子和/或分泌信号序列的方法和将它们插入到包含复制所需信息的合适载体中的方法是本领域技术人员已知的(参见,例如,Sambrook等,以上引用的)。
宿主细胞
引入到宿主细胞的编码所述酶的DNA序列对所说的宿主细胞而言可以是同源的或者是异源的。如果对宿主细胞是同源的,即由宿主细胞天然,则其典型地被可操作连接到另一启动子或者(可用的话)另一分泌信号序列和/或终止子序列上,而不是在其天然环境中。术语″同源的″旨在包括编码所说宿主细胞天然酶的cDNA序列。术语″异源的″旨在包括所说宿主细胞天然不表达的DNA序列。这样,所说的DNA序列可以来源于另一个生物体,或者其可以是合成的序列。
本发明的DNA构建体或重组载体引入其中的宿主细胞可以是能够产生本发明的酶的任何细胞,包括细菌,酵母,真菌和高等真核细胞。
经培养能够产生本发明的酶的细菌宿主细胞的例子是革兰氏-阳性菌,例如芽胞杆菌属的菌株(如枯草芽胞杆菌、地衣形芽孢杆菌、迟缓芽孢杆菌、短芽孢杆菌、嗜热脂肪芽孢杆菌、Bacillus alkalophilus、液解化淀粉杆菌、凝结芽孢杆菌、环状芽孢杆菌、灿烂芽孢杆菌、巨大芽胞杆菌或苏云金芽孢杆菌菌株)或链霉菌属的菌株(例如浅青紫链霉菌或鼠灰链霉菌的菌株),或者革兰氏-阴性菌,例如大肠杆菌。可以用已知方法经原生质体转化或者使用感受态细胞进行细菌的转化(参见Sambrook等,同上)。
当在细菌(如大肠杆菌)中表达酶时,酶可以被保留在细胞质中(典型地是以被称作包含体的不溶性颗粒)或由细菌分泌序列引导到周质空间中。在前一种情况下,裂解细胞,回收颗粒并变性,此后经稀释变性剂使酶再折叠。在后一种情况下,可以经裂解细胞从周质空间回收所说酶,如通过超声波或渗透冲击以释放周质空间的内含物并回收酶。
合适的酵母细胞的例子包括Saccharomyces spp.或Schizosaccharomyces spp.的细胞,啤酒糖酵母或者克鲁弗酵母的特定菌株。用于用异源DNA转化酵母细胞并且从此产生异源酶的方法在例如US4,599,311,US 4,931,373,US 4,870,008,5,037,743,和US 4,845,075(所有这些本文一并参考)中有描述。转化细胞由通过选择性标记确定的表型选择。所述选择性标记一般是对药物的抗性或者在缺少特殊营养物(例如亮氨酸)的情况下的生长能力。用于酵母的一个优选的载体是US 4,931,373中公开的POT1载体。编码本发明的酶的DNA序列可以在信号序列和可有可无的前导序列之前,例如如以上所述的。合适的酵母细胞的例子是克鲁维酵母属(如乳酸克鲁维酵母)、汉逊酵母属(例如多形汉逊酵母)或毕赤酵母属(如巴斯德毕赤酵母)的菌株(参见Gleeson等,遗传微生物学杂志1321986,pp.34593465;US 4,882,279)。
其它真菌细胞的例子是丝状真菌的细胞,例如Aspergillus spp.,Neurospora spp.,Fusarium spp.或Trichoderma spp.,尤其是米曲霉,构巢曲霉,黑曲霉或禾谷镰孢的菌株。EP 272 277和EP 230 023中描述了Aspergillus spp.用于表达蛋白质的用途。尖镰孢的转化可以例如按照Malardier等,1989,基因78:147-156的描述进行。
当丝状真菌用作宿主细胞时,其可以用本发明的构建体转化,通常是将所说DNA构建体整合进宿主染色体中以获得重组体宿主细胞。这一整合一般被认为是有利的,因为所述DNA构建体很可能稳定保持在细胞中。可以按照常规方法(如同源或者异源重组)将所述DNA构建体整合进染色体中。
然后在可以表达所说酶的条件下在合适的营养培养基中培养以上描述的转化或转染宿主细胞,接着从培养物中回收所形成的酶。
用于培养所说细胞的培养基可以是任何常规的适于培养所说宿主细胞的培养基,例如含有适当补充物的最小或复合培养基。合适的培养基可以从供应商获得或者可以按照出版的(例如美国典型培养物保藏中心目录中)配方制备。然后,由所述细胞产生的酶可以用常规方法从培养基回收,所述方法包括经离心和过滤从培养基分离宿主细胞,借助盐(如硫酸铵)沉淀上层清液或滤液中的蛋白质组份,依据所述酶的类型,用各种色谱分离方法(如离子交换色谱,凝胶色谱,亲合色谱)纯化等。
另一方面,本发明涉及产生按照本发明的酶的方法,其中在可以产生所述酶的条件下培养合适的用编码酶的DNA序列转化的宿主细胞,并从培养物中回收所形成的酶。
用分类学和生态学进行的酶筛选
设计来检测和选择所说类型的兴趣酶的象分子筛选之类的强有力的工具其自身仍不能满足需要。为了使兴趣发现的机会最大,在这一研究中将分子筛选方法与小心选择待筛选的真菌组合。通过全面考虑真菌的鉴别法、分类学类别和种系发生关系进行选择。
如果包括生态学方法,则可以仅进一步地充分探讨溶纤酶产生的分类学热点。设计聪明的筛选和取得成功的选择菌株和待研究的生态小生境需要适应各种底物的全面的知识(尤其植物材料的腐生、神经营养或活体营养降解)。
本文所公开的分类学和生态学方法两者的目标都是在分子筛选程序中最多地发现所述酶。然而,仍然有几百(或者如果包括了所有初期工作)几千种真菌被培养,以便检测本文报道的所说类型的溶纤酶的53个目标。
可以按以下所述进行筛选和克隆:
材料和方法
生物体列表:
啤酒糖酵母DSM 9770、DSM 10082、DSM 10080、DSM 10081或大肠杆菌DSM 10512、DSM 10511、DSM 10571、DSM 10576分别含有质粒,该质粒包含在穿梭载体pYES 2.0中的编码本发明的内切葡聚糖酶的全长DNA序列。
大肠杆菌DSM 10583、10584、10585、10586、10587和10588。
棉色二孢Cooke
菌株的保藏:保藏号CBS 274.96
分类位置:子囊菌门(Ascomycota),腔菌纲,座囊菌目,葫芦霉科
Ulospora bilgramii(Hawksw等)Hawksw等
菌株的保藏号:NKBC 1444,日本大学,(Prof.Tubaki保藏中心)
分类位置:子囊菌门,腔菌纲,座囊菌目,(科未分类)
Microsphaeropsis sp.
分离自:在中国云南省昆明植物园中生长的山茶的叶片(茶科,Guttiferales)
分类位置:子囊菌门,腔菌纲腔菌纲,座囊菌目,(科未分类)
Macrophomina phaseolina(Tassi)Goidannich
别名:Rhizoctonia bataticola
菌株的保藏:保藏号CBS 281.96
分离自在泰国生长的Glycine max(Leguminosa)cv CMM 60的种子,1990
分类位置:子囊菌门,盘菌纲,斑痣盘菌目,斑痣盘菌科
Rscobolus stictoideus Speg.
分离自挪威,Svalbard,鹅粪
分类位置:子囊菌门,盘菌纲,盘菌目,粪盘菌科
Saccobolus dilutellus(Fuck.)Sacc.
菌株的保藏:保藏号CBS 275.96
分类位置:子囊菌门,盘菌纲,盘菌目,粪盘菌科
疣孢青霉Peyronel
物种的保藏号:ATCC 62396
分类位置:子囊菌门,不整囊菌纲,散囊菌目,发菌科
产黄青霉Thom
菌株的保藏号:ATCC 9480
分类位置:子囊菌门,不整囊菌纲,散囊菌目,发菌科
Thermomyces verrucosus Pugh等
菌株的保藏:保藏号CBS 285.96
分类位置:子囊菌门,不整囊菌纲,散囊菌目,(科未分类;affiliation基于18S RNA,测序以及同源性)
鹿角团炭角菌L.ex Greille
菌株的保藏:保藏号CBS 284.96
分类位置:子囊菌门,Pyrenomycetes,炭角菌目,炭角菌科
点孔座壳(Fr.ex L.)Fr.
分类位置:子囊菌门,Pyrenomycetes,炭角菌目,炭角菌科
Nodulisporum sp.
分离自在中国云南省昆明植物园中生长的山茶的叶片(茶科,Guttiferales)
分类位置:子囊菌门,Pyrenomycetes,炭角菌目,炭角菌科
Cylindrocarpon sp.
分离自海上样品,Bahamas
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,(科未分类)
Acremonium sp
菌株的保藏:保藏号CBS 478.94
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,肉座菌科
蛇形镰孢Sherbakoff
菌株的保藏号:IFO 4467
分类位置:子囊菌门,Pyrenomycetes,肉座菌自,肉座菌科
早熟禾镰孢(Peck)Wr.
物种的保藏号:ATCC 60883
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,肉座菌科
腐皮镰孢(Mart.)Sacc.emnd.Snyd & Hans.
菌株的保藏号:IMI 107.511
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,肉座菌科
番茄尖镰孢ssp lycopersici(Sacc.)Snyd.& Hans.
菌株的保藏号:CBS 645.78
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,肉座菌科
尖镰孢ssp passiflora
菌株的保藏号:CBS 744.79
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,肉座菌科
链孢粘帚霉Gillman & Abbott
菌株的保藏号:CBS 227.48
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,肉座菌科
Nectria pinea Dingley
菌株的保藏:保藏号CBS 279.96
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,小赤壳科
Volutella colletotrichoides
菌株的保藏号:CBS 400.58
分类位置:子囊菌门,Pyrenomycetes,肉座菌目,(科未分类)
大孢粪壳Auerswald
物种的保藏号:ATCC 60255
分类位置:子囊菌门,Pyrenomycetes,粪壳目,粪壳科
粪生粪壳(Roberge)Cesati et De Notaris
物种的保藏号:ATCC 52644
分离自H.Dissing的粪,ISP,KU,丹麦
分类位置:子囊菌门,Pyrenomycetes,粪壳目,粪壳科
灰腐质霉Traeen
物种的保藏号:ATCC 22726
来源:Hatfield Polytechnic
分类位置:子囊菌门,Pyrenomycetes,粪壳目,(科未分类)
黑腐质霉Omvik
菌株的保藏号:CBS 819.73
分类位置:子囊菌门,Pyrenomycetes,粪壳目,(科未分类)
Scytalidium thermophilum(Cooney et Emerson)Austwick
菌株的保藏号:ATCC 28085
分类位置:子囊菌门,Pyrenomycetes,粪壳目,(科未分类)
Thielavia thermophila Fergus et Sinden(别名Corynascusthermophilus)
菌株的保藏号:CBS 174.70,IMI 145.136
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
分离自蘑菇堆肥
Thielavia terrestris(Appinis)Malloch et Cain
菌株的保藏号:NRRL8126
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
Cladorrhinum foecundissimum Saccardo et Marchal
物种的保藏号:ATCC 62373
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛球壳科
分离自牙买加达拉斯山Selandin sp(Compositaceae,Asterales)的叶片
Syspastospora boninensis
菌株的保藏号:NKBC 1515(日本大学,profe Tubaki保藏中心)
分类位置:子囊菌门,Pyrenomycetes,粪壳目,Cerastomataceae
管毛壳Fuckel
菌株的保藏号:CBS 799.83
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
巴西毛壳Batista et Potual
菌株的保藏号:CBS 122.65
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
墙毛壳Corda
菌株的保藏号:CBS 163.52
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
Chaetomium virescens(von Arx)Udagawa
菌株的保藏号:CBS 547.75
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
Myceliophthora thermophila(Apinis)Oorschot
菌株的保藏:保藏号CBS 117.65
分类位置:子囊菌门,Pyrenomycetes,粪壳目,毛壳科
Nigrospora sp
菌株的保藏:保藏号CBS 272.96
分离自在牙买加Christiana中生长的Artocarpus altilis的叶片,Moraceae,Urticales
分类位置:子囊菌门,Pyrenomycetes,Trichosphaeriales,(科未分类)
Nigrospora sp
分离自云南昆明植物园的Pinus yuannanensis的叶片
分类位置:子囊菌门,Pyrenomycetes,假毛球壳目,Abietaceae,Pinales.
Diaporthe syngenesia
菌株的保藏:保藏号CBS 278.96
分类位置:子囊菌门,Pyrenomycetes,Diaporthales,黑腐皮壳科
葫芦科刺盘孢(Passerini)Ellis et Halsted别名围小丛壳orbiculare变种Jenkins et Winstead
物种的保藏号:ATCC 52609
分类位置:子囊菌门,Pyrenomycetes,黑痣菌目
黑胶耳Fr.
菌株的保藏:保藏号CBS 277.96
分类位置:担子菌门,层菌纲,木耳目,黑耳科
Crinipellis scabella(ALb.Schw.:Fr.)Murr
菌株的保藏号:CBS 280.96
分类位置:担子菌门,层菌纲,蘑菇目
网纹斑褶菇(Fr.)Gill.
菌株的保藏号:CBS 275.47
分类位置:担子菌门,层菌纲,蘑菇目,鬼伞科
木蹄层孔菌(L.)Fr.
菌株的保藏:保藏号CBS 276.96
分类位置:担子菌门,层菌纲,非褶菌目,Fomitaceae
Spongipellis sp.
菌株的保藏:保藏号CBS 283.96
分类位置:担子菌门,层菌纲,非褶菌目,烟管菌科(由18S序列和同源性分类学鉴别和相联系)
血红栓菌(Fr.)Lloyd别名:血红多孔菌;血红密孔菌(L.:Fr.)
菌株的保藏号:AKU 5062(京都大学培养物保藏中心)
分类位置:担子菌门,非褶菌目,多孔菌科
Schizophyllum commune Fr.
物种的保藏号:ATCC 38548
分类位置:担子菌门,非褶菌目,裂褶菌科
红根囊壶菌(de Bary & Wor)Fischer
菌株的保藏号:CBS 282.96
分类位置:壶菌门,壶菌纲,Spizellomycetales,Spizellomycetaceae
Rhizomucor pusillus(Lindt)Schipper别名:微小毛霉
菌株的保藏号:IFO 4578
物种的保藏号:ATCC 46883
分类位置:接合菌门,接合菌纲,毛霉目,毛霉科
闪光须霉(Kunze)van Tieghem & Le Monnier
菌株的保藏号:IFO 4814
物种的保藏号:ATCC 16327
分类位置:接合菌门,接合菌纲,毛霉目,毛霉科
弗雷生刺枝霉vanTieghem & Le Monnier别名.Helicostylum fresenii
菌株的保藏号:NRRL 2305
分类位置:接合菌门,接合菌纲,毛霉目,rhamnidiaceae
未分类的:
粉红单端孢
菌株的保藏号:IFO 5372
Coniothecium sp
植物内寄生菌,分离自在中国云南省昆明的未鉴别的高等植物的叶片
未分类和未鉴别的:
菌株的保藏:保藏号CBS 271.96
分离自牙买加Christiana生长Artocarpus altilis(桑科,Urticales)的叶片
菌株的保藏:保藏号CBS 273.96
分离自牙买加达拉斯山生长的Pimenta dioica(桃金娘科,Myrtales)的叶片
菌株的保藏号:CBS 270.96
分离自牙买加达拉斯山生长的Pseudocalymma alliaceum(紫葳科,Solanales)叶片
其它菌株:
大肠杆菌MC1061和DH10B。
酵母菌株:所使用的啤酒糖酵母菌林是W3124(MATα;ura 3-52;leu2-3,112;his 3-D200;pep 4-1137;prcl::HIS3;prbl::LEU2;cir+)。
质粒:
曲霉属表达载体pHD414是质粒p775(在EP 238 023中描述)的衍生物。pHD414的构建在WO 93/11249中有进一步的描述。
pYES 2.0(Invitrogen)。
pA2C477,pA2C193,pA2C357,pA2C371,pA2C385,pA2C475,pA2C488,pA2C502(参见实施例1、2、3和4)。
分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的DNA序列的分离:
通过用本领域已知的方法(Sambrook等(1989)分子克隆:实验室手册,冷泉港实验室,冷泉港,纽约)经抽提质粒,可以分别从保藏的生物体啤酒糖酵母DSM 9770、DSM 10082、DSM 10080、DSM 10081、大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576获得全长DNA序列,这些全长DNA序列包含分别在SEQ ID NO:1、4、6、8、10、12、16或19中所示的编码本发明的内切葡聚糖酶的cDNA序列。
分子筛选本发明的纤维素酶的PCR引物:
四个简并的含脱氧肌苷的寡核苷酸引物(有义;s和反义;as1、as2和as3)相应于四个高度保守氨基酸区,这些区在Thielavia terrestris纤维素酶、Myceliophthora thermophilum纤维素酶和两种来源于Acremonium sp.的纤维素酶的推定的氨基酸序列中发现,按照Myceliophthora thermophilum序列对残基编号。在引物序列中脱氧肌苷由I表示,限制位点上有下划线。
27 35
NH2 -Thr Arg Tyr Trp Asp Cys Cys Lys Pro/Thr-COOH
s 5′-CCCCAAGCTT ACI AGI TAC TGG GAC TGC TGC AAA AC-3′
HindIII C T T T T G C
106 111
NH2 -Trp Cys Cys Ala Cys Tyr- COOH
as1 3′-CC ACA ACA CGI ACA AT AGATCTGATC-5′
G G G XbaI
145 152
NH2 -Pro Gly Gly Gly Leu/Val Gly Ile/Leu Phe-COOH
as2 3′-GGI CCI CCI CCI AAI CCI AAI AA AGATCTGATC-5′
C G XbaI
G T
193 198
NH2 -Trp Arg Phe/Tyr Asp Trp Phe-COOH
as3 3′-CC GCI AAA CTA ACC AAA AGATCTGATC-5′
T TG G G XbaI
经聚合酶链反应(PCR)进行分子筛选:
基因组DNA和双链cDNA的体外扩增
按照以下描述从5微克poly(A)+RNA定向合成双链cDNA。按照Yelton等的描述分离基因组DNA。
在PCR缓冲液中经PCR扩增约10至20ng双链纤维素酶-诱导的cDNA或100至200ng选择的真菌菌株的基因组DNA,所说缓冲液(10mMTris-HCl(pH8.3)、50mM KCl、1.5mM MgCl2、0.01%(w/v)明胶)包含200μM各dNTP和100pmol按以下组合的各简并引物:
1)
有义,
5’-CCCCAAGCTTACIA/CGITAC/TTGGGAC/TTGC/TTGC/TAAA/G A/CC-3’
反义1,
5’-CTAGTCTAGATAA/GCAIGCA/GCAA/GCACC-3’;或
2)
有义,
5’-CCCCAAGCTTACIA/CGITAC/TTGGGAC/TTGC/TTGC/TAAA/G A/CC-3’
反义2,
CTAGTCTAGAAAIAA/G/TICCIAA/C/GICCICCICCIGG-3’;或
3)
有义,
5’-CCCCAAGCTTACIA/CGITAC/TTGGGAC/TTGC/TTGC/TAAA/G A/CC-3’
反义3,
5’-CTAGTCTAGAIAACCAA/GTCAA/G A/TAICG/TCC-3;
一种DNA热循环仪(Landgraf,德国)和2.5单位Taq聚合酶(Perkin-Elmer,Cetus,US)。采用以下循环方式进行PCR的三十个循环:在94℃变性1分钟,64℃退火2分钟,72℃延伸3分钟。以HaeIII-消化的φX174RF DNA为大小标记,通过在3%琼脂糖凝胶(NuSieve,FMC)中的电泳分析扩增产物的10微升等分试样。
PCR产物的直接测序
按照制造商的说明使用QIAquick PCR纯化试剂盒(Qiagen,US)纯化PCR产物的80微升等分试样。经双脱氧链-终止方法,使用50-150ng模板,Taq尾端脱氧循环测序试剂盒(Perkin-Elmer,USA),荧光标记的终止剂,和5pmol有义引物:5′-CCCCAAGCTTACIA/CGITAC/TTGGGAC/TTGC/TTGC/T AAA/G A/CC-3′直接在纯化的PCR产物上测定扩增的PCR片段的核苷酸序列。按照Devereux等的描述对序列数据进行分析。
经聚合酶链反应(PCR)克隆:PCR片段的亚克隆
将如以上所述所产生的PCR产物25微升等分试样在0.8%低胶凝温度琼脂糖(SeaPlaque GTG,FMC)凝胶上进行电泳,从凝胶上切下相关的片段。通过添加0.1体积10×琼脂糖酶缓冲液(New England Biolabs)和2单位/100微升熔化的琼脂糖到样品中,接着在45℃温育1.5小时,经琼脂糖酶处理回收。用酚和三氯甲烷抽提样品,经添加2体积96%EtOH和0.1体积3M NaAc(pH5.2)沉淀。经离心回收PCR片段,在70%EtOH中洗涤,干燥和再悬浮于20微升限制酶缓冲液(10mM Tris-HCl,10mM MgCl2,50mMNaCl,1mM DTT)中。以HindIII和XbaI消化片段,用酚和三氯甲烷提取,经2体积96%EtOH和2体积NaAc(pH 5.2)沉淀回收,并亚克隆进HindIII/XbaI-切割的pYES 2.0载体中。
筛选cDNA文库和阳性克隆的特佂确定。以相应的随机引导的(Feinberg和Vogelstein)32P-标记的(>1×10cpm/微克)PCR产物作为探针,经菌落杂交(Sambrook,1989)筛选按以下所说构建的啤酒糖酵母和大肠杆菌的cDNA文库。于65℃在2x SSC(Sambrook,1989)、5x Denhardt′s溶液(Sambrook,1989)、0.5%(w/v)SDS、100μg/ml变性鲑精DNA中进行杂交20小时,接着于25℃在5x SSC(2x15分钟)中、于65℃在2xSSC、0.5%SDS(30分钟)中、于65℃在0.2xSSC、0.5%SDS(30分钟),最后于25℃在5x SSC(2x15分钟)中洗涤。采用以下方法确定阳性cDNA克隆的特征,所述方法是用pYES 2.0多接头引物(Invitrogen,USA)测序cDNA插入物的末端,用双脱氧链终止法(Sanger等)采用荧光标记的终止剂测定两条链的最长cDNA的核苷酸序列。按照制造商的说明,采用应用生物系统373A自动测序仪,用Taq脱氧末端循环测序试剂盒(Perkin Elmer USA)和pYES 2.0多接头引物(Invitrogen,USA)或合成寡核苷酸引物测序Qiagen纯化的质粒DNA(Qiagen USA)。按照Devereux等描述的方法进行序列数据分析。
用硫氰酸胍进行总RNA的抽提,接着经5.7M CsCl垫层超离心法,采用WO 94/14953中描述的方法经寡(dT)-纤维素亲合色谱法进行poly(A)+RNA的分离。
cDNA合成:采用RNase H方法(Gubler和Hoffman(1983)基因25:263-269,Sambrook等(1989)分子克隆:实验室手册,冷泉港实验室,冷泉港,NY)用F.S.Hagen(pers.comm.)开发的发夹修饰从5微克poly(A)+RNA合成双链cDNA。在预硅烷化的无核糖核酸酶的Eppendorph试管中于70℃加热poly(A)+RNA(在5μl DEPC处理的水中的5μg)8分钟,在冰上骤冷,添加逆转录酶缓冲液至终体积50微升,所述逆转录酶缓冲液(50mM Tris-Cl(pH8.3)、75mM KCl、3mM MgCl2,10mM DTT,Bethesda研究实验室)包含1mM dATP、dGTP和dTTP;0.5mM 5′-甲基-dCTP(Pharmacia);40单位人类胎盘核糖核酸酶抑制剂(RNasin,Promega);1.45微克oligo(dT)18-Not I引物(Pharmacia)以及1000单位SuperScript II核糖核酸酶H逆转录酶(Bethesda研究实验室)。通过在45℃温育反应混合物1小时合成第一链cDNA。在合成之后,将mRNA:cDNA杂交混合物按照制造者的说明经MicroSpin S-400HR(Pharmacia)旋转柱凝胶过滤。
在凝胶过滤之后,将杂交体用第二链缓冲液稀释,所述缓冲液(20mMTris-HCl(pH7.4)、90mM KCl、4.6mM MgCl2、10mM(NH4)2SO4、0.16mM(NAD+)包含200μM各种dNTP、60单位大肠杆菌DNA聚合酶I(Pharmacia)、5.25单位核糖核酸酶H(Promega)和15单位大肠杆菌DNA连接酶(Boehringer曼海姆)。通过在16℃下温育反应试管2小时和在25℃下温育15分钟进行第二链cDNA合成。由添加乙二胺四乙酸至最终浓度20mM终止反应,其后用酚和三氯甲烷抽提。
Mung大豆核酸酶处理:通过于-20℃下添加2体积的96%EtOH、0.2体积的10M NH4Ac沉淀双链cDNA 12小时,离心回收,用70%EtOH洗涤,干燥并再悬浮于30微升Mung大豆核酸酶缓冲液中,该缓冲液(30mM NaAc(pH4.6)、300mM NaCl,1mM ZnSO4,0.35mM DTT,2%甘油)包含25单位Mung大豆核酸酶(Pharmacia)。通过在30℃温育反应物30分钟,接着添加70微升10mM Tris-HCl(pH7.5)、1mM乙二胺四乙酸,苯酚抽提以及在冰上用2体积96%乙醇和0.1体积3M NaAc(pH 5.2)沉淀来剪切单链发夹DNA。用T4DNA聚合酶钝化末端:离心回收双链cDNA,在30微升含0.5mM各种dNTP和5单位T4DNA聚合酶(New England Biolabs)的T4 DNA聚合酶缓冲液中16℃温育1小时,使末端钝化。加入EDTA至终浓度20mM,然后用苯酚和氯仿提取,加入2体积96%EtOH和0.1体积3M NaAc(pH5.2)于-20℃沉淀12小时。
衔接子连接,Not I消化和大小选择:在填充反应完成后,经离心回收cDNA,用70%EtOH洗涤并干燥。将cDNA沉淀重悬于25微升连接缓冲液中,所述缓冲液(30mM Tris-HCl(pH7.8)、10mMMgCl2、10mM DTT、0.5mMATP)包含2.5微克非回文BstXI衔接子(Invitrogen)和30单位T4连接酶(Promega),在16℃温育12小时。通过在65℃加热20分钟然后在冰上冷却终止反应。连接的cDNA用Not I限制酶消化,其是通过添加20微升水,5微升10×Not I限制酶缓冲液(New England Biolabs)和50单位Not I(NewEngland Biolabs),接着在37℃温育2.5小时进行的。65℃加热10分钟终止反应。经凝胶电泳在1×TBE中的0.8%SeaPlaque GTP低熔化温度琼脂糖凝胶(FMC)上大小分级分离cDNA,以分离未连接的衔接子和小的cDNA。按照制造者的说明,由切下0.7kb并用β-琼脂糖酶(New EnglandBiolabs)从凝胶救援出,并且于-20℃添加2体积96%EtOH和0.1体积3MNaAc(pH5.2)沉淀12小时来进行cDNA的大小选择。
文库的构建:通过离心回收定向的、选择了大小的cDNA,在70%EtOH中洗涤,干燥并悬浮在30μl的10mM Tris-HCl(pH 7.5),1mM EDTA中。按照制造厂商的说明通过MicroSpin S-300HR(Pharmacia)旋转柱进行凝胶过滤使cDNA脱盐。在10μl包含5μl双链cDNA(反应试管#1和#2)、15单位的T4连接酶(Promega)以及30ng(试管#1)、40ng(试管#2)和40ng(试管#3,载体背景对照)的BstXI-Not I裂解的pYES 2.0载体的连接缓冲液(30mMTris-HCl(pH7.8)、10mM MgCl2、10mM DTT、0.5mM ATP)中进行三种试验连接。通过在16℃下温育12小时、在70℃下加热20分钟、然后向每个试管添加10μl的水进行连接反应。如上所述把1μl的每种连接混合物电穿孔进40μl电感受态的(electrocompetent)大肠杆菌DH10B细胞(Bethesda研究实验室)中(Sambrook等,(1989)分子克隆:实验室手册,冷泉港实验室,冷泉港,NY)。使用最优条件在包含库的大肠杆菌中建立文库。各库通过在LB+氨苄青霉属素琼脂平板涂布转化的大肠杆菌并在37℃下培养24小时产生15000-30000克隆/平板制作。把20ml LB+氨苄青霉素添加到平板上并悬浮细胞。使细胞悬浮液于37℃下在50ml试管中振荡1小时。使用QIAGEN质粒试剂盒按照按照制造厂商的说明从细胞分离质粒DNA并在-20℃下保存。
把得自各个库的1μl纯化质粒DNA(100ng/μl)的等分试样通过电穿孔转化进啤酒糖酵母W3124中(Becker和Guarante(1991)酶学方法,194:182-187),把转化体平板接种于包含2%葡萄糖的SC琼脂上并在30℃下培养。
阳性菌落的鉴别:在生长3-5天之后,把琼脂平板复制接种于一组包含0.1%AZCL HE纤维素的SC+半乳糖-尿嘧啶琼脂平板上。将这些平板在30℃下培养3-7天。内切葡聚糖酶阳性菌落鉴定为蓝环围绕的菌落。
为了在琼脂上分离单个菌落,涂布得自酶-阳性菌落的细胞,为了鉴别产生内切葡聚糖酶的菌落,选择产生酶的单个菌落。
阳性克隆的鉴定:阳性克隆作为单个菌落获得,使用生物素化的多接头引物直接从酵母菌落扩增cDNA插入片段,通过磁性小珠(Dynabead M-280,Dynal)系统纯化,并通过使用链-末端方法(Sanger等(1977)美国科学院学报,74:5463-5467)和Sequenase系统(美国生物化学)测定每个cDNA克隆的5′-末端序列单个地确定其特征。
使用荧光标记的终止子通过双脱氧链终止方法(Sanger等)测定得自两条链的最长cDNA的核苷酸序列。通过如下所述转化进大肠杆菌救援(rescue)质粒DNA。使用Applied Biosystems 373A自动测序仪按照制造厂商的说明用Taq脱氧末端循环测序试剂盒(Perkin Elmer,US)和pYES 2.0多接头引物(Invitrogen,USA)或合成的寡核苷酸引物测定Qiagen纯化的质粒DNA(Qiagen,USA)的序列。序列数据的分析按照Devereux等进行。
在曲霉中表达的cDNA基因的分离:把产生内切葡聚糖酶的酵母菌落接种于在50ml玻璃试管中的20ml YPD培养液中。试管在30℃下振荡2天。通过在3000rpm下离心10分钟收获细胞。
按照WO 94/14953分离DNA并将其溶解在50μl水中。通过标准方法把DNA转化进大肠杆菌。使用标准方法从大肠杆菌分离质粒DNA并通过限制酶分析进行分析。使用适当的限制酶切除cDNA插入片段并连接进曲霉表达载体中。
米曲霉或黑曲霉的转化
如WO 95/02043的16页,21行-17页,12行(本文一并参考)所述制备原生质体。
把100μl的原生质体悬浮液和5-25μg在10μl STC(1.2M山梨醇,10mMTris-HCl,pH=7.5,10mMCaCl2)中的适当DNA混合。将原生质体与p3SR2(携带A.nidulans amdS基因的质粒)混合。混合物在室温下放置25分钟。添加0.2ml 60%PEG 4000(BDH 29576)、10mMCaCl2、10mM Tris-HCl(pH 7.5)并小心地混合(两次),最后添加0.85ml的相同溶液并小心地混合。混合物在室温下放置25分钟,在2500g下旋转15分钟,把沉淀悬浮在2ml的1.2M山梨醇中。在再次沉淀之后把原生质体涂布在最小的包含1.0M蔗糖(pH 7.0),10mM乙酰胺作为氮源以及20mM CsCl以抑制背景生长的平板上(Cove,生物化学学报,113(1966)51-56)。于37℃下培养4-7天之后,选择孢子并涂布以形成单个菌落。重复该过程,保存第二次再分离之后的单个菌落的孢子作为所定义的转化体。
米曲霉转化体的试验
把每个转化体接种在10ml的YPM中并繁殖。在于37℃下接种2-5天之后,除去10ml的上清液。如上所述通过AZCL HE纤维素鉴别内切葡聚糖酶活性。
用于评价本发明的DNA构建体的性质ii)的杂交条件:
测定核苷酸探针和同源DNA或RNA序列之间的杂交的合适条件包括:在5×SSC(标准柠檬酸盐)中预浸渍包含待杂交DNA片段或RNA的滤膜10分钟,滤膜在5×SSC(Sambrook等1989)、5×Denhardt′s溶液(Sambrook等1989)、0.5%SDS和100μg/ml变性的声处理的鲑精DNA(Sambrook等1989)中预杂交,然后在包含随机引物的(Feinberg,A.P.和Vogelstein,B.(1983)生物化学年评,132:6-13)、32P-dCTP-标记的(比活>1×109cpm/μg)的探针的相同溶液中于约45℃下杂交12小时。然后滤膜在2×SSC、0.5%SDS中洗涤两次30分钟,温度优选地不高于50℃,更优选地不高于55℃,更优选地是不高于60℃,更优选地是不高于70℃,尤其是不高于75℃。用于杂交的核苷酸探针是对应于分别在SEQ ID NO:1、4、6、8,、10、12或16中所示的DNA序列和/或分别可以从在啤酒糖酵母DSM 9770、DSM 10082、DSM 10080、DSM 10081,大肠杆菌DSM 10512、DSM 10511、DSM 10571或DSM 10576中的质粒获得的DNA序列的内切葡聚糖酶编码部分的DNA序列。
免疫交叉反应:用于测定免疫交叉反应的抗体可以通过使用纯化的纤维素酶制备。更具体地说,抗本发明的纤维素酶的抗血清可通过按照N.Axelsen在“定量免疫电泳手册”,Blackwell科学出版社,1973,23章中或A.Johnstone和R.Thorpe,实践免疫化学,Blackwell科学出版社,1982(更具体地说在27-31页)中描述的方法制备。纯化的免疫球蛋白可从抗血清获得,如通过盐沉淀((NH4)2SO4)并进行渗析和离子交换色谱(如在DEAE-Sephadex上)。蛋白质的免疫化学定性可通过Outcherlony双扩散分析(O.Ouchteriony:试验免疫学手册(D.M.Weir,Ed.),Blackwell科学出版社,1967,655-706页)、交叉免疫电泳(N.Axelsen等,同上,第3和4章)或火箭免疫电泳(N.Axelsen等,第2章)完成。
培养基
YPD:10g酵母提取物,20g蛋白胨,加H2O至900ml。高压灭菌,添加100ml 20%的葡萄糖(无菌过滤的)。
YPD:10g酵母提取物,20g蛋白胨,加H2O至900ml。高压灭菌,添加100ml 20%的麦芽糖糊精(无菌过滤的)。
10×碱盐(basel salt):75g酵母氮碱(nitrogen base),113g琥珀酸,68g NaOH,加H2O至1000ml,无菌过滤。
SC-URA:100ml 10×碱盐,28ml无维生素的20%酪蛋氨基酸,10ml 1%的色氨酸,加H2O至900ml,高压灭菌,添加3.6ml 5%苏氨酸以及100ml 20%葡萄糖或20%半乳糖。
SC-URA琼脂:SC-URA,添加20g/l琼脂。
PD琼脂:39g马铃薯右旋糖琼脂,DIFCO 0013;添加去离子水至1000ml;高压灭菌(121℃下15-20分钟)。
PC琼脂:马铃薯和胡萝卜(研磨,每种20g),添加水至1000ml,煮沸1小时;琼脂(20g/l Merck 1614);高压灭菌(121℃下20分钟)。
PC液态培养基:如PC琼脂,但没有琼脂。
PD液态培养基:24g马铃薯右旋糖培养液,Difco 0549,添加去离子水至1000ml;高压灭菌(121℃下15-20分钟)。
具有纤维素的PC和PD液态培养基:每1000ml添加30g Solcafloc(Dicacel可从Dicalite-Europe-Nord,9000Gent,比利时获得)。
PB-9液态培养基:把12g Rofec(Roquette 101-0441)和24g葡萄糖添加至1000ml水中;把pH值调整到5.5;每1000ml添加5ml矿物油和5gCaCO3。高压灭菌(121℃下40分钟)。
YPG液态培养基:4g酵母提取物(Difco 0127),1gKH2PO4(Merck4873),0.5g MgSO4·7H2O Merck 5886,15g右旋糖,Roquette101-0441,0.1ml Pluronic(101-3088);添加去离子水至1000ml;高压灭菌(121℃下20分钟)
稀释盐溶液(DS):制备两种母液:
P-母液:13.61g KH2PO4;13.21g(NH4)2PO4,17.42g KH2PO4;添加去离子水至100ml。
Ca/Mg母液:7.35g CaCl2·2H2O,10.17g MgCl2·6H2O,添加去离子水至l 00ml;把pH值调整至7.0;高压灭菌(121℃;20分钟)
把0..5mlP-母液和0.1ml Ca/Mg母液混合
添加去离子水至1000ml
AZCL HE纤维素(Megazyme,澳大利亚)。
用途
在洗涤和穿着过程中,染色的织物或衣物的染料通常渗色,从而使衣物看起来已褪色和穿旧。从织物表面除去纤维将部分地恢复织物初始的颜色和外观。本文所使用的术语“颜色澄清”是指通过多次洗涤循环织物或衣物的初始颜色部分地恢复。
术语“除去丸状物”指从织物表面除去丸状物。
术语“浸泡液体”指这样的一种含水的液体,要洗的衣物在进行常规洗涤过程前要浸泡在其中。浸泡液体可包含一种或多种通常用于洗涤或洗涤方法的组分。
术语“洗液”指这样的一种含水的液体,在其中要洗的衣物进行洗涤过程,即通常是一种手工或在洗衣机中的化学或机械结合的作用。通常,洗液是粉剂或液体洗涤剂组合物的水溶液。
术语“冲洗液体”指这样的一种含水的液体,为了冲洗要洗的衣物,即实质上从要洗的衣物中除去洗涤剂溶液,在其中浸泡并处理要洗的衣物,通常是在洗涤过程之后立即进行。冲洗液体可包含织物条理或软化组合物。
按照本发明的方法要洗的衣物可以是常规的可洗的衣物。优选地,要洗的衣物的主要部分是缝合或未缝合的织物,包括从棉制造的编织物(knits)、编织物(wovens)、斜纹粗棉布、纱线和毛巾、棉混纺物或天然或人造纤维素(如制自包含木聚糖的纤维素织物,如制自木浆)或其混合物。混合物的例子是具有一种或多种辅助材料的棉或人造纤维/纤维胶(如羊毛、合成纤维(如聚酰胺纤维、丙烯酸纤维、聚酯纤维、聚乙烯醇纤维、聚氯乙烯纤维、聚偏二氯乙烯纤维、聚氨甲酸乙酯纤维、聚脲纤维、aramid纤维)以及包含纤维素的纤维(如人造纤维/纤维胶、苎麻、亚麻/亚麻布、黄麻、乙酸纤维素纤维、lyocell)。
洗涤剂组合物
按照本发明的一个方面,本发明的内切葡聚糖酶可典型地是洗涤剂组合物的组分。同样地,它们可以以非尘状粒剂、稳定液体或受保护的酶形式包括在洗涤剂组合物中。非尘状粒剂可按照,如在US 4,106,991和4,661,452所(二者都属于Novo Industri A/S)公开的方法产生并可有可无地按照本领域的方法包衣。蜡状的表面盖覆剂的例子是平均分子量为1000至20000的聚(环氧乙烷)产物(聚乙二醇,PEG);具有16至50个环氧乙烷单位的乙氧基化的壬基酚;乙氧基化的脂肪醇(其中醇包含12至20个碳原子,具有15至80个环氧乙烷单位);脂肪醇;脂肪酸;脂肪酸的甘油单、双和三酸酯。在专利GB 1483591中给出了通过流化床技术制成的适于应用的形成薄片的表面盖覆剂的例子。如液态酶制剂可按照已制定的方法通过添加多羟基化合物(如丙二醇、糖或糖醇、乳酸或硼酸)稳定。其它酶稳定剂在本领域中是已知的。受保护的酶按照在EP 238,216中公开的方法制备。
本发明的洗涤剂组合物可以是任何方便的形式,如粉剂、粒剂、糊剂或液体。液体洗涤剂可是水溶液,典型地包含多达70%的水和0-30%的有机溶剂,或非水溶液。
洗涤剂组合物包含一种或多种表面活性剂,每种活化剂可以是阴离子、非离子、阳离子或两性离子的。洗涤剂通常包含0-50%阴离子表面活性剂,如线性烷基苯磺酸盐(LAS)、α-烯烃磺酸盐(AOS)、烷基硫酸盐(脂肪醇硫酸酯)(AS)、脂肪醇乙氧基硫酸盐(AEOS或AES)、仲烷烃磺酸盐(SAS)、α-硫代脂肪酸甲基酯、烷基或烯基琥珀酸或皂。它可以包含0-40%的非离子表面活性剂,如脂肪醇乙氧基化物(AEO或AE)、羧化的脂肪醇乙氧基化物、壬基酚乙氧基化物、烷基聚苷、烷基二甲胺氧化物、乙氧基化的脂肪酸单乙醇酰胺、脂肪酸单乙醇酰胺或聚羟烷脂肪酸酰胺(如如在WO 92/06154中所描述的)。
洗涤剂组合物还可包含一种或多种其它酶,如淀粉酶、脂酶、角质酶、蛋白酶、过氧化物酶和氧化酶,如漆酶。
洗涤剂可包含1-65%洗涤剂助洗剂或配位剂,如沸石、二磷酸盐、三磷酸盐、膦酸酯、柠檬酸盐、次氨基三乙酸(NTA)、乙二氨四乙酸(EDTA)、二乙三胺五乙酸(DTMPA)、烷基或烯基琥珀酸、可溶性硅酸盐或层硅酸盐(如得自Hoechst的SKS-6)。洗涤剂也可无助洗剂,即实质上不含洗涤剂助洗剂。
洗涤剂可包含一种或多种聚合物。例子是羧甲基纤维素(CMC)、聚(乙烯吡咯烷酮)(PVP)、聚乙二醇(PEG)、聚(乙烯醇)(PVA)、聚羧酸酯,如聚丙烯酸酯、马来酸/丙烯酸共聚物和甲基丙烯酸月桂基酯/丙烯酸共聚物。
洗涤剂可包含漂白系统,该系统包含H2O2源,如与形成过酸的漂白活化剂(如四乙基乙二胺(TAED)或壬酰氧苯磺酸盐(NOBS))结合的过硼酸盐或过碳酸盐。另外,漂白系统可包含过酸,如酰胺、酰亚胺或砜型。
本发明的洗涤剂组合物的酶可以使用常规的稳定剂稳定,如多羟基化合物(如丙二醇或甘油)、糖或糖醇、乳酸、硼酸或硼酸衍生物,如芳族硼酸酯,组合物可按照在如WO 92/19708和WO 92/19709中所述制成制剂。
洗涤剂也可包含其它常规的洗涤剂组份,如织物调理剂,包括粘土、泡沫辅助剂、抑泡剂、抗腐蚀剂、污物悬浮剂、抗污物再沉积剂、染料、杀菌剂、荧光增白剂或香料。
pH(于使用浓度下在水溶液中测量)通常是中性或碱性的,如在7-11的范围内。
在本发明的范围之内洗涤剂组合物的具体形式包括:
1)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(按酸计) | 7-12% |
乙氧基脂肪醇硫酸酯(如C12-18醇,1-2EO)或烷基硫酸盐(如C16-18) | 1-4% |
乙氧基脂肪醇(如C14-15醇,7EO) | 5-9% |
碳酸钠(计为Na2CO3) | 14-20% |
可溶性硅酸盐(计为Na2O,2SiO2) | 2-6% |
沸石(计为NaAlSiO4) | 15-22% |
硫酸钠(计为Na2SO4) | 0-6% |
柠檬酸钠/柠檬酸(计为C6H5Na3O7/C6H8O7) | 0-15% |
过硼酸钠(计为NaBO3·H2O) | 11-18% |
TAED | 2-6% |
羧甲基纤维素 | 0-2% |
聚合物(如马来酸/丙烯酸的共聚物,PVP,PEG) | 0-3% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如抑泡剂,香料,光学增亮剂,光漂白剂) | 0-5% |
2)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 6-11% |
乙氧基脂肪醇硫酸酯(如C12-18醇,1-2EO)或烷基硫酸盐(如C16-18) | 1-3% |
乙氧基脂肪醇(如C14-15醇,7EO) | 5-9% |
碳酸钠(计为Na2CO3) | 15-21% |
可溶性硅酸盐(计为Na2O,2SiO2) | 1-4% |
沸石(计为NaAlSiO4) | 24-34% |
硫酸钠(计为Na2SO4) | 4-10% |
柠檬酸钠/柠檬酸(计为C6H5Na3O7/C6H8O7) | 0-15% |
羧甲基纤维素 | 0-2% |
聚合物(如马来酸/丙烯酸的共聚物,PVP,PEG) | 1-6% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如抑泡剂,香料) | 0-5% |
3)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 5-9% |
乙氧基脂肪醇(如C12-15醇,7EO) | 7-14% |
脂肪酸皂(如C16-22脂肪酸) | 1-3% |
碳酸钠(计为Na2CO3) | 10-17% |
可溶性性酸盐(计为Na2O,2SiO2) | 3-9% |
沸石(计为NaAlSiO4) | 23-33% |
硫酸钠(计为Na2SO4) | 0-4% |
过硼酸钠(计为NaBO3·H2O) | 8-16% |
TAED | 2-8% |
膦酸盐(如EDTMPA) | 0-1% |
羧甲基纤维素 | 0-2% |
聚合物(如马来酸/丙烯酸的共聚物,PVP,PEG) | 0-3% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如抑泡剂,香料,光学增亮剂) | 0-5% |
4)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 8-12% |
乙氧基脂肪醇(如C12-15醇,7EO) | 10-25% |
碳酸钠(计为Na2CO3) | 14-22% |
可溶性硅酸盐(计为Na2O,2SiO2) | 1-5% |
沸石(计为NaAlSiO4) | 25-35% |
硫酸钠(计为Na2SO4) | 0-10% |
羧甲基纤维素 | 0-2% |
聚合物(如马来酸/丙烯酸的共聚物,PVP,PEG) | 1-3% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如抑泡剂,香料) | 0-5% |
5)一种水溶液洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 15-21% |
乙氧基脂肪醇(如C12-15醇,7EO或C12-15醇,5EO) | 12-18% |
脂肪酸皂(如油酸) | 3-13% |
烯基琥珀酸(C12-14) | 0-13% |
氨基乙醇 | 8-18% |
柠檬酸 | 2-8% |
膦酸盐 | 0-3% |
聚合物(如PVP,PEG) | 0-3% |
硼酸盐(计为B4O7) | 0-2% |
乙醇 | 0-3% |
丙二醇 | 8-14% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如分散剂,抑泡剂,香料,光学增亮剂) | 0-5% |
6)一种含水结构化液体洗涤剂组合物,该洗涤剂包含:
线性烷基苯磺酸盐(以酸计) | 15-21% |
乙氧基脂肪醇(如C12-15醇,7EO或C12-15醇,5EO) | 3-9% |
脂肪酸皂(如油酸) | 3-10% |
沸石(计为NaAlSiO4) | 14-22% |
柠檬酸钾 | 9-18% |
硼酸盐(计为B4O7) | 0-2% |
羧甲基纤维素 | 0-2% |
聚合物(如PVP,PEG) | 0-3% |
锚定聚合物,如甲基丙烯酸月桂酯/丙烯酸共聚物;摩尔比25∶1;MW3800 | 0-3% |
甘油 | 0-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如分散剂,抑泡剂,香料,光学增亮剂) | 0-5% |
7)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
脂肪醇硫酸盐 | 5-10% |
乙氧基化的脂肪酸单乙醇酰胺 | 3-9% |
脂肪酸皂 | 0-3% |
碳酸钠(计为Na2CO3) | 5-10% |
可溶性硅酸盐(计为Na2O,2SiO2) | 1-4% |
沸石(计为NaAlSiO4) | 20-40% |
硫酸钠(计为Na2SO4) | 2-8% |
过硼酸钠(计为NaBO3·H2O) | 12-18% |
TAED | 2-7% |
聚合物(如马来酸/丙烯酸的共聚物,PEG) | 1-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如光学增亮剂,抑泡剂,香料) | 0-5% |
8)一种制成粒剂的洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 8-14% |
乙氧基化的脂肪酸单乙醇酰胺 | 5-11% |
脂肪酸皂 | 0-3% |
碳酸钠(计为Na2CO3) | 4-10% |
可溶性硅酸盐(计为Na2O,2SiO2) | 1-4% |
沸石(计为NaAlSiO4) | 30-50% |
硫酸钠(计为Na2SO4) | 3-11% |
柠檬酸钠(计为C6H5Na3O7) | 5-12% |
聚合物(如马来酸/丙烯酸的共聚物,PEG) | 1-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如抑泡剂,香料) | 0-5% |
9)一种制成粒剂的洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 6-12% |
非离子表面活性剂 | 1-4% |
脂肪酸皂 | 2-6% |
碳酸钠(计为Na2CO3) | 14-22% |
沸石(计为NaAlSiO4) | 18-32% |
硫酸钠(计为Na2SO4) | 5-20% |
柠檬酸钠(计为C6H5Na3O7) | 3-8% |
过硼酸钠(计为NaBO3·H2O) | 4-9% |
漂白活化剂(如NOBS或TAED) | 1-5% |
羧甲基纤维素 | 0-2% |
聚合物(如聚羧酸或PEG) | 1-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如光学增亮剂,香料) | 0-5% |
10)一种液体洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 15-23% |
乙氧基醇硫酸酯(如C12-15醇,2-3EO) | 8-15% |
乙氧基化醇(如C12-15醇,7EO或C12-15醇,5EO) | 3-9% |
脂肪酸皂(如月桂酸) | 0-3% |
氨基乙醇 | 1-5% |
柠檬酸钠 | 5-10% |
水溶助剂(如甲苯磺酸钠) | 2-6% |
硼酸盐(计为B4O7) | 0-2% |
羧甲基纤维素 | 0-1% |
乙醇 | 1-3% |
丙二醇 | 2-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如聚合物,分散剂,香料,光学增亮剂) | 0-5% |
11)一种液体洗涤剂组合物,该组合物包含
线性烷基苯磺酸盐(以酸计) | 20-32% |
乙氧基化醇(如C12-15醇,7EO或C12-15醇,5EO) | 6-12% |
氨基乙醇 | 2-6% |
柠檬酸钠 | 8-14% |
硼酸盐(计为B4O7) | 1-3% |
聚合物(如马来酸/丙烯酸聚合物,锚定聚合物如甲基丙烯酸月桂酯/α-丙烯酸共聚物) | 0-3% |
甘油 | 3-8% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如水溶助剂,分散剂,香料,光学增亮剂) | 0-5% |
12)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
非离子表面活性剂(线性烷基苯磺酸盐,烷基硫酸盐,α-烯烃磺酸盐,α-硫代脂肪酸甲基酯,烷磺酸盐,肥皂) | 25-40% |
非离子表面活性剂(乙氧基化醇) | 1-10% |
碳酸钠(计为Na2CO3) | 8-25% |
可溶性硅酸盐(计为Na2O,2SiO2) | 5-15% |
硫酸钠(计为Na2SO4) | 0-5% |
沸石(计为NaAlSiO4) | 15-28% |
过硼酸钠(计为NaBO3·4H2O) | 0-20% |
漂白活化剂(TAED或NOBS) | 0-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如香料,光学增亮剂) | 0-5% |
13)如在1)-12)中所述的洗涤剂制剂,其中线性烷基苯磺酸盐全部或部分由(C12-C18)烷基硫酸盐取代。
14)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
(C12-C18)烷基硫酸盐 | 9-15% |
乙氧基化醇 | 3-6% |
聚羟烷基脂肪酸酰胺 | 1-5% |
沸石(计为NaAlSiO4) | 10-20% |
层焦硅酸钾(如得自Hoechst的SK56) | 10-20% |
碳酸钠(计为Na2CO3) | 3-12% |
可溶性硅酸盐(计为Na2O,2SiO2) | 0-6% |
柠檬酸钠 | 4-8% |
过碳酸钠 | 13-22% |
TAED | 3-8% |
聚合物(如聚羧酸盐和PVP) | 0-5% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如光学增亮剂,光漂白剂,香料,抑泡剂) | 0-5% |
15)一种制成粒剂的具有至少600g/l的堆密度的洗涤剂组合物,该组合物包含
(C12-C18)烷基硫酸盐 | 4-8% |
乙氧基化醇 | 11-15% |
肥皂 | 1-4% |
沸石MAP或沸石A | 35-45% |
碳酸钠(计为Na2CO3) | 2-8% |
可溶性硅酸盐(计为Na2O,2SiO2) | 0-4% |
过碳酸钠 | 13-22% |
TAED | 1-8% |
羧甲基纤维素 | 0-3% |
聚合物(如聚羧酸盐和PVP) | 0-3% |
酶(以纯化的酶蛋白质计算) | 0.0001-0.1% |
小组分(如光学增亮剂,磷酸盐,香料) | 0-3% |
16)如在1)-15)中所述的洗涤剂制剂,该制剂包含作为另外的组分或作为已经指出的漂白系统的替代物的稳定或胶囊化的过酸。
17)如在1)、3)、7)、9)和12)中所述的去垢组合物,其中所说的过硼酸盐被过碳酸盐替代。
18)如在1)、3)、7)、9)、12)、14)和15)中所述的去垢组合物,该组合物还包含锰催化剂。锰催化剂可以是,例如在“用于低温漂白的有效的锰催化剂”,自然369,1994,637-639中所描述的一种化合物。
19)制成非水溶液洗涤剂液体的去垢组合物,该组合物包含液态非离子表面活性剂如线性的烷氧基化伯醇、助洗剂系统(如磷酸盐)、酶和碱。洗涤剂也可以包含阴离子表面活性剂和/或漂白系统。
内切葡聚糖酶可以以通常用于洗涤剂的浓度掺入。它包含在本发明的洗衣组合物中,纤维素酶可以以对应于每升洗液中0.0001-10mg(以纯化的酶蛋白质计算)的纤维素酶添加。
按照本发明的另一个方面,内切葡聚糖酶可典型地是织物调节剂或软化组合物的组分。通常的软化组合物的例子在例如EP 0 233 910中公开。
纺织中的应用
在另一个实施方案中,本发明涉及本发明的内切葡聚糖酶在生物抛光过程的用途。生物抛光是纱表面的特异性处理,这种处理改进了织物的手感和外观的质量,而不失去织物可湿性。生物抛光最重要的作用可通过很少起毛和形成丸状物、增加光彩/光泽、改进的织物手感、增加的耐用软度以及改变的吸水能力表征。生物抛光通常发生在针织和编织的织物制造的湿处理之中。湿处理包含如下步骤:脱浆、冲洗、漂白、洗涤、染色/印花和涂饰。在每个这样的步骤期间,织物或多或少地进行机械作用。通常,在针织和编织织物之后,织物进行到脱浆阶段,其后为冲洗阶段等。脱浆是从织物除去浆糊的作用。在机械织机上编织之前,为了增加弯曲的纱线的抗张强度,常常用浆糊淀粉或淀粉衍生物包被。在编织之后,浆糊包被物在进一步处理织物之前必须除去以确保均匀和防洗效果。已知为了达到生物抛光的效果,需要溶纤和机械作用的组合。还已知当用纤维素酶处理和用软化剂的常规处理结合时可达到“超软化”。可以设想本发明的内切葡聚糖酶用于纤维素织物的生物抛光是有优势的,如可达到更彻底的抛光。生物抛光可通过应用例如在WO 93/20278中所描述的方法获得。
石洗
已知可通过在浮石存在下洗涤斜纹粗棉布或从这样的织物制造的牛仔裤以提供所需的织物颜色的局部发亮或通过酶促处理织物(具体来说是用溶纤酶)在染色的织物(具体来说是在斜纹粗棉布织物或牛仔裤中)上提供“石洗的”外观(局部颜色磨损)。可以单独(如在US 4,832,864中所公开的)或与比在传统的方法较少量的浮石一起或与珍珠岩一起(如在WO95/09225中公开的)进行本发明的内切葡聚糖酶的处理。
纸浆和纸上的应用
在造纸纸浆工业中,本发明的内切葡聚糖酶有利地应用到如下方面:
-用于剥树皮:在机械转筒中剥树皮之前,用内切葡聚糖酶的预处理可降解形成层,从而有利于节能。
-用于脱纤维因为纤维素酶对内部纤维表面的水解作用,在精制或打浆之前用内切葡聚糖酶处理含纤维素纤维的材料可导致能量消耗的减少。使用内切葡聚糖酶与使用已知的酶相比可导致改进的节能,因为人们相信:本发明的酶组合物具有更高的穿透纤维壁的能力。
-用于纤维改性,即纤维性质的改进,其中需要跨纤维壁的部分水解,这需要更深的穿透酶(如为了使粗糙的纤维更柔韧)。迄今为止,纤维的深度处理对高产量的纸浆(如机械纸浆或再循环纸浆的混合物)是不可能的。这归结于纤维壁结构的性质(因为纤维壁的孔基质的物理限制,该性质阻止酶分子的通过)。设想本发明的内切葡聚糖酶能渗入纤维壁。
-排水改进。造纸纸浆的排水能力可通过用水解酶(如纤维素酶)处理纸浆得到改进。木素纤维素纸浆的处理可按照例如在WO 91/14819、WO91/14822、WO 92/18688和WO 92/17573中的描述进行。
植物材料的降解
在另一个实施方案中,本发明涉及按照本发明的内切葡聚糖酶和/或酶制剂用于植物材料(如细胞壁)降解的用途。
本发明涉及为了增加产量在酒、水果或蔬菜汁中应用本发明新内切葡聚糖酶和/或酶制剂。按照本发明的内切葡聚糖酶也可用于各种植物细胞衍生的材料或废材料的酶促水解,如农业残余物,如麦秸杆、玉米穗轴、整株玉米植物、核果壳、草、蔬菜壳、豆壳、谷壳、甜菜浆等。为了改进不同种类的加工、促进其它组分的纯化或提取(如从谷物中纯化β-葡聚糖或β-葡聚糖低聚物)、改进食物价值、减少水结合量、在废水植物中提高降解、提高(如秣草保藏法的草和谷类的)转化等,可以降解植物材料。
下列实施例说明本发明。
实施例1
通过表达克隆检测了4种真菌的溶纤酶,这4种真菌属于子囊菌纲的两个目之内的3个科;测定了相应的DNA序列;异源表达和通过液体发酵产生的酶在颜色澄清测定中进行特征分析,表明其具有良好的性能。
使分离物CBS 117.65、CBS 478.94、NRRL 8126和ATCC 10523在振荡烧瓶培养器中在富含纤维素的马铃薯右旋糖培养液中生长,在26℃下培养5天(振荡条件,150rpm)。
A.Myceliophthora thermophila、Acremonium sp.、Thielaviaterrestris和Volutella colletotrichoides的内切葡聚糖酶的克隆和表达
分别分离Myceliophthora thermophila、Acremonium sp.、Thielaviaterrestris和Volutella colletotrichoides的mRNA,这些生物体生长在含有纤维素的发酵培养基(振荡培养基以确保充分换气)中。在生长3-5天后收获菌丝,立即把菌丝在液氮中冷冻,并且储存在-80℃下。在所描述的大肠杆菌中利用1%的载体背景分别构建Myceliophthora、thermophilaAcremonium sp.,Thielavia terrestris 和Volutellacolletotrichoides的文库,每个文库中含有大约106个单个克隆。
把每一个文库的一些集合的质粒DNA转化到酵母中,从每一个集合中得到了含有250-400个酵母菌落的50-100个平板。
利用AZCL HE纤维素测定法在SC-琼脂平板上鉴别和分离内切葡聚糖酶-阳性菌落。从酵母菌落直接扩增cDNA插入物,并且利用以上材料和方法部分中描述的方法进行性质分析。
SEQ ID NO:1显示了编码Myceliophthora thermophila的内切葡聚糖酶的cDNA的DNA序列,SEQ ID NO:1也显示了相应氨基酸序列。从DSM 9770的质粒中可以获得此cDNA。
编码Acremonium sp.的内切葡聚糖酶的cDNA的DNA序列列于SEQ ID NO:4中,相应氨基酸序列列于SEQ ID NO:5中。从DSM 10082的质粒中可以获得此cDNA。
编码Thielavia terrestris的内切葡聚糖酶的cDNA的DNA序列列于SEQID NO:8中,相应氨基酸序列列于SEQ ID NO:9中。从DSM 10081的质粒中可以获得此cDNA。
编码Volutella colletotrichoides的内切葡聚糖酶的cDNA的DNA序列列于SEQ ID NO:16中,相应氨基酸序列列于SEQ ID NO:17中。从DSM 10571的质粒中可以获得该cDNA。
从酵母菌落分离出总DNA,并且通过转化以上所述的大肠杆菌救援质粒DNA。为了在米曲霉属中表达内切葡聚糖酶,用适当的限制性内切酶消化DNA,在凝胶上进行片断分级分离,分别纯化与Myceliophthorathermophila、Acremonium sp.、Thielavia terrestris和Volutellacolletotrichoides内切葡聚糖酶基因相应的片段,其后把基因连接到用适当的限制性内切酶消化的pHD414中,分别形成了质粒pA2C357、pA2C193、pA2C385和pA2C488。
在大肠杆菌中扩增DNA之后,把质粒转化到以上所述的米曲霉中。米曲霉转化体试验
如上所述试验每个转化体的内切葡聚糖酶的活性。一些转化体比米曲霉背景具有更大的内切葡聚糖酶活性。这表明了在米曲霉中内切葡聚糖酶的有效表达。利用YPM培养基在500ml摇瓶中选择和接种了具有最高的内切葡聚糖酶活性的转化体。在发酵(为确保良好的通气进行充分的搅拌)3-5天后,把培养液以2000g离心10分钟,并且回收上清液。
B.内切葡聚糖酶活性的测定
可以测定内切葡聚糖酶相当于分析标准物的溶纤活性,并且以单位S-CEVU表示。
溶纤酶水解CMC,因此减少了培养混合物的粘度。可以通过振动粘度计(例如法国Sofraser,MIVI 3000)测定产生的粘度减弱。
可以按照AF 301.1分析方法进行以S-CEVU测量的溶纤活性的测定,这种方法可以向本申请人索取。
通过测量样品的减少羧甲基纤维素(CMC)溶液粘度的能力,S-CEVU测定方法量化了样品中的催化活性。测定在40℃、pH7.5的条件下进行,同时利用了降低CMC底物粘度的相关的酶标准物。
利用磷酸饱和纤维素(PASC)以SAVI单位测定内切葡聚糖酶活性的测定方法:
定义:
1SAVI-U是形成一定量的还原碳水化合物(相当于每分钟1μmol的葡萄糖)的酶量。
测定条件:
酶溶液:0.5ml
0.1M缓冲液中的4g/PASC:2.0ml
20分钟,40℃
敏感性:
最大0.1SAVIU/ml=大约1S-CEVU/ml(CMC粘度)
最小0.01SAVIU/ml=大约0.1S-CEVU/ml
还原糖形成的测定:
按照Lever,M.比色法测定碳水化合物的一种新反应(生物化学年报1972.vol 47(273-279))进行还原基团的测定。通过把1.5克对羟苯甲酸氢酸(PHBILH)和5克酒石酸钠在100ml的2%氢氧化钠中混合制备试剂混合物。
底物:
利用冰冻丙酮和磷酸按照下面的方式制备PASC贮液。把5克纤维素(Avicel)用水湿润,加入150ml 85%的冰冻正磷酸。把混合物放置在冰浴中,缓慢搅拌1小时。然后加入100ml冰冻丙酮并且搅拌。把浆液转移到带有烧结的3号pyrex盘的Buchner过滤器中,并且用冰冻丙酮洗涤三次,每次洗涤之后尽可能吸干。最后把滤饼用500ml水洗涤两次,每次洗涤之后尽可能吸干。把PASC与去离子水混合,使总体积达到300ml,均匀混合(使用超Turrax均化器),并且保存在冰箱中(达一个月)。
用缓冲液平衡底物:20克磷酸饱和的纤维素PASC贮液以5000rpm.离心20分钟,倒出上清液;沉淀在30ml缓冲液中再悬浮并在5000rpm.下离心20分钟。倒出上清液,将总共60克的沉淀以5克纤维素/升的浓度悬浮在缓冲液中。
pH 8.5的测定缓冲液:0.1M巴比妥。
pH 10的测定缓冲液:0.1M甘氨酸。
方法:
1.酶样品的稀释
将酶溶液在与底物相同的缓冲液中稀释。
2.酶反应
将缓冲溶液中的底物在42℃下预热5分钟(2ml)。然后加入0.5ml酶溶液(稀释至0.2-1S-CEVU/ml),混合5秒钟。通过在酶溶液中添加终止试剂获得酶空白。40℃下培养20分钟。通过加入0.5ml 2%NaOH溶液并混合5秒钟终止反应。
将样品以5000rpm.离心20分钟。将1ml上清液与0.5ml PHBAH试剂混合,并且煮沸10分钟。试管在冰水浴中冷却。
3.还原末端基团的确定
使用分光光度计在410nm测量吸收率。通过在加入酶溶液之前加入氢氧化钠制备空白。利用在相同缓冲液中的5,10,15和25mg/l浓度的葡萄糖和在煮沸之前加入PHBAH试剂获得葡萄糖标准曲线。利用标准曲线计算释放的还原葡萄糖当量。
4.催化活性的计算
测量410nm的吸收率
1)标准曲线
(葡萄糖)-(H2O)对葡萄糖的浓度
2)酶样品
(样品)-(空白)
按照标准曲线计算葡萄糖浓度
活性(SAVIU/ml):
X(mg葡萄糖/l)*稀释液
180.16(葡萄糖的分子量)*20(分钟)
C.M.termophila的内切葡聚糖酶的纯化和性质分析
将pA2C193转化的米曲霉在YPM培养基上培养4天。然后将液体离心并无菌过滤。
利用20kD阈值的DOW膜GR61PP通过在AMICON室中的超滤作用浓缩样品。分析超滤浓缩物的S-CEVU/ml和SaviU/ml,得到下列结果:
Uf-浓缩物 | S-CEVU/ml | SaviU/ml |
9.25ml | 570 | 41 |
纯化:
把2毫升UF-浓缩物稀释5倍,以降低其离子强度,并通过0.22μm圆板过滤器过滤。将样品加入到用50mM Tris/HCl缓冲液(pH 7.5)平衡的Mono Q HR/5Pharmacia柱上,流速为1毫升/分钟。在用缓冲液A洗脱到基线时,用含有1M NaCl(缓冲液B)的Tris/HCl缓冲液(pH7.5)洗脱,梯度洗脱是在1小时之内缓冲液B从0-50%变化。
36分钟后,出现高峰复合物,收集每份1ml的流份,将最初的10个流份在羧甲基纤维素/琼脂糖/刚果红的平板上显示纤维素酶活性。
合并这些流份,并利用20kD阈值的DOW膜GR61PP通过在AMICON室中的超滤作用浓缩至3毫升。
将样品加入到用100mM Tris/HCl缓冲液(pH 6.35)平衡的HiLoad 2660Superdex 75TM prep梯度Pharmacia柱上,流速为1毫升/分钟。
82分钟后,出现高峰,每份1ml收集流份,最初的10个流份在羧甲基纤维素/琼脂糖/刚果红的平板上显示纤维素酶活性。
合并这些流份,得到的结果如下:
A280=0.15
A280/A260=1.62
Mw(SDS)=22kD
pI=3.5-5
SDS-PAGE上的纯度=100%
S-CEVU/ml=28.5
S-CEVU/A280=188
S-CEVU/mg=436
消光系数=54880(计算的)
Mw(计算的)=22kD
消光系数是以由所附的SEQ ID NO:1(氨基酸序列)的序列计算的酪氨酸、色氨酸和半胱氨酸的含量为基础。在NOVEX Pre-Cast凝胶4-20%Tris-甘氨酸凝胶1.0mm×10孔上进行SDS-Page。
在Pharmacia PAG板(pH3.5-9.5)上进行IEF,由羧甲基纤维素-刚果红覆盖显现出活性。
KM和Kcat的测定:
在pH 8.5和底物浓度多达8克/毫升的情况下,以与测定SAVI单位相同的方式测定Km和Kcat。
得到下列结果:
Kcat为38/每秒,
Km为5g/l,
磷酸饱和纤维素,pH 8.5。
在pH 7.5时对羧甲基纤维素的比活性:每毫克蛋白质436 S-CEVU。D.M.thermophila的内切葡聚糖酶的pH和温度分布图的确定
在下列条件下测定pH的分布图:
通过把0.1MTri-磷酸钠与0.1M柠檬酸混合制备pH值在2.5-10.0之间的缓冲液。稀释纯化的内切葡聚糖酶以便确保测定反应在测定的线性范围内。底物是0.4%AZCL-HE-纤维素(MegaZyme)的悬液,其以1∶1和柠檬酸/磷酸盐缓冲液混合,使最终的底物浓度为0.2%AZCL-HE-纤维素。向1.5ml聚丙烯管中的1ml底物加入10μl酶溶液,并在控温热混合仪(Thermomixer)中培养15分钟,然后将酶在另一热混合仪中95℃下热灭活20分钟。离心,并将200μl的各上清液转移到96孔微量滴定板的各个孔中,通过ELISA读数仪(LabsystemsMCC/340)在620nm测量OD。最适pH的培养温度是30℃。对于每个pH值,三个管中都加入了酶并在热灭活之前培养,而一个管(空白)加入酶并立即热灭活。计算了三个培养样品的平均值,并减去空白值。
测定了下列pH下分布:
pH | 相对活性 |
2.5 | <10% |
3 | <10% |
3.5 | 22% |
4 | 87% |
4.5 | 89% |
5 | 100% |
6 | 94% |
6.5 | 86% |
7 | 78% |
7.5 | 73% |
8 | 68% |
8.5 | 54% |
9 | 31% |
10 | 18% |
可以看出内切葡聚糖酶在pH4.0和8.0之间有60%以上的活性,最佳活性在pH5.0-6.0
温度分布:
在pH 5.5下以相同的方式确定最佳温度。温度范围从30℃到80℃。对于每种温度,进行三个培养,并计算平均值。通过酶的即刻热灭活产生三个空白,并从培养的样品值减去空白的平均值。
可以看出内切葡聚糖酶在50-70℃时具有最佳活性。
温度(℃) | 30 | 40 | 50 | 60 | 70 | 80 |
相对活性 | 74% | 77% | 99% | 100% | 93% | 62% |
在pH 5.5和30℃下,以相同的方式测定温度稳定性,并将所说的酶溶液在此温度下预热1小时。下表显示没有预热的酶样品的百分活性:
温度(℃) | 40 | 50 | 60 | 70 | 80 |
相对活性 | 95% | 84% | 92% | 86% | 24% |
E.以毁丝霉属纤维素酶(SEQ ID NO.1)除去表面纤丝和从含有纤维素纤维的织物中突出的纤维为指标测量其对颜色的净化
仪器:Terg-O-tometer
液体体积:100ml
搅拌:150次/分钟的垂直搅拌器
冲洗时间:自来水5分钟
洗涤温度:40℃
洗涤液体:0.05M磷酸盐缓冲液
pH:7.0
洗涤时间:30分钟
重复:2次
酶:毁丝霉属SEQ ID NO.1B
剂量:500和2500S-CEVU/l
织物:2块旧的黑色100%棉布样品,5×6cm(0.9克)
干燥:滚动干燥
评价:由Datacolor Elrepho反射分光光度计测量光反射(Remission)。将反射值计算成ΔL(Hanter实验室值)。当纤维素酶除去表面纤丝和从纱中突出的纤维时,黑色织物的表面看起来更黑,并得到更低的L值。
将所说的样品和对照样品(即没有酶洗涤的样品)比较:
没有纤维素酶 500 ECU/l 2500 ECU/l
0.00 -1.41 -1.91
ΔL值和对照样品比较。
所得的数据显示在试验的条件下,没有CBD的毁丝霉属纤维素酶给出很好的颜色澄清作用。
F.Myceliophthora thermophila的内切葡聚糖酶和Humicola insolens的43kD内切葡聚糖酶的基因融合体的构建
这两种构建的目的在于制造M.thermophila的内切葡聚糖酶的衍生物,这种衍生物具有接头和H.insolens(在WO 91/17243中公开)的43kD内切葡聚糖酶的CBD。M.thermophila的天然内切葡聚糖酶没有接头和/或纤维素结合域(CBD)。
CM1:构建体1由M.thermophila的内切葡聚糖酶(225个氨基酸)和H.insolens的43kD内切葡聚糖酶的72个C-末端氨基酸组成。
CM2:构建体2由M.thermophila的内切葡聚糖酶(225个氨基酸)和H.insolens的43kD内切葡聚糖酶的83个C-末端氨基酸组成。
以从Taka-启动子转录内切葡聚糖酶基因的方法将H.insolens的43kD内切葡聚糖酶cDNA克隆到pHD414中。形成的质粒命名为pCaHj418。
以相似的方法将M.thermophila的内切葡聚糖酶的cDNA克隆到pHD414中,形成的质粒命名为pA2C193。
引物1:5′-
CGGAGCTCACGTCCAAGAGCGGCTGCTCCCGTCCCTCCAGCAGCACCAGCTCTCCGG
-3′
引物2:5′
CCGGAGAGCTGGTGCTGCTGGAGGGACGGGAGCAGCCGCTCTTGGACGTGAGCTCCG
-3′
引物3:5′-
CGGAGCTCACGTCCAAGAGCGGCTGCTCCCGTAACGACGACGGCAACTTCCCTGCCG
-3′
引物4:5′-
CGGCAGGGAAGTTGCCGTCGTCGTTACGGGAGCAGCCGCTCTTGGACGTGAGCTCCG
-3′
Taka-pro.引物:5′CAACATCACATCAAGCTCTCC-3′
AMG-term.引物:5′CCCCATCCTTTAACTATAGCG-3′
通过如Higuchi等(1988)描述的PCR重叠延伸方法构建内切葡聚糖酶融合体。
构建体1:
反应A:利用聚合酶链反应(PCR)扩增引物1和AMG-term.引物之间的pCaHj418的片段(H.insolens的43kD内切葡聚糖酶的接头和CBD部分)。
反应B:pA2C193中的Taka-pro引物和引物2之间的片段(M.thermophila的内切葡聚糖酶基因)的PCR扩增。
反应C:在整个侧翼区引物(即Taka-pro引物和AMG-term.引物)存在的情况下,在第三个PCR中利用前面的两个纯化的片断。
构建体2:
利用同样的方法,其中引物3和引物4分别替代引物1和引物2。
纯化反应C中扩增的片段,以限制酶Xba I和BsstE II消化。将纯化的消化片段连接在以限制酶Xba I和BsstE II消化的pA2C193上。
用连接的质粒转化大肠杆菌菌株DH5αF′(新英格兰生物实验室)的感受态细胞,并分离包含基因融合体的克隆。通过DNA测序验证克隆部分的序列。
SEQ ID NO:2A和SEQ ID NO.3A显示了两个构建体的基因序列。
在如Perkin-Elmer推荐的标准条件下进行聚合酶链反应。
反应A和B以94℃2分钟开始,之后是20个循环(30秒钟,94℃;30秒钟,50℃;1分钟,72℃),并以72℃4分钟结束。
反应C以(2分钟,94℃;1分钟,52℃;和2分钟,72℃)开始,之后是15个循环(30秒钟,94℃;30秒钟,52℃;90秒钟,72℃),并以72℃4分钟结束。
如上面所述,将这两个构建体转化到米曲霉中。
G.克隆的带有纤维素结合域的纤维素酶的纯化和性质分析
发酵后,从生产菌的胞外液分离回收克隆产物。
然后,在含pH 7.5的20mM磷酸钠的浆液中使用150克的微晶纤维素,通过亲合层析高度纯化大约1克的纤维素酶。
将所说的微晶纤维素与共含约1克纤维素酶的粗发酵液混合。在4℃下混合20分钟后,将所说的微晶纤维素酶装入大小为50×200mm的总体积400毫升的柱中。
将柱用200ml缓冲液洗涤,然后在相同的缓冲液中以0.5M NaCl洗涤直到不再有蛋白质洗脱液。然后以500ml 20mm的Tris(pH 8.5)洗涤。最后以1%三乙胺(pH 11.8)洗脱纯化的全长酶。
将洗脱下来的酶溶液调至pH 8,并利用带有膜DOW GR61PP(阈值为20kD的聚丙烯)的Amicon室浓缩至每毫升含有5mg以上的蛋白质。
纯化的纤维素酶性质分析如下:
Mw PI 摩尔E.280 S-CEVU
SDS-PAGE /A.280
毁丝霉属(SEQ ID No.2) 43kD 4 74.950 135
顶孢霉属(SEQ ID No.5) 40kD 5 68.020 185
梭孢壳属(SEQ ID No.9) 35kD 4.3 52.470 75
活性超过50% N末端 热稳定性DSC
的pH
毁丝霉属(SEQ ID No.2) 5.0-9.0 封阻的 80℃
顶孢霉属(SEQ ID No.5) 6.0-9.5 封阻的 61℃
梭孢壳属(SEQ ID No.9) 5.0-9.0 ASGSG--- 83℃
通过SDS-PAGE分析纤维素酶的分子量,并利用Pharmacia的标准LMW蛋白质标记试剂盒计算纤维素酶的分子量。分子量明显高于编码氨基酸的组成的分子量,这是因为接头区是O-糖基化的,结果导致高分子量。使用Pharmacia两性电解质PAG板(pH3.5至9.5)并再使用带有已知PI的蛋白质的Pharmacia试剂盒确定PI。
利用已知吸收率的色氨酸、酪氨酸和半胱氨酸以氨基酸组成为基础计算摩尔消光系数。
利用羧甲基纤维素作为底物,以0.5pH为间隔在40℃下培养20分钟并计算还原糖的形成而获得pH活性分布图。计算了不同pH下的相对活性,表中包含有超过50%相对活性的间隔点。
利用应用生物系统模型473A测序仪确定了纯化的纤维素酶的N-末端。按照制造商的说明操作此蛋白质测序仪。
两个纤维素酶被封阻,这是因为形成致热谷氨酸盐的N-末端谷氨酰胺,无法检测致热谷氨酸盐,并且其阻断了进一步的测序。
利用MicroCalc公司的具有连续扫描速率的MC热量计(calorimeter),并将温度以每小时90℃的速率从20℃升至90℃,在中性pH(7.0)下进行DSC差示扫描量热法。
产生抗体。利用毁丝霉属、顶孢霉属和梭孢壳属的纤维素酶在兔中产生抗体。将0.1毫克纯化的溶解在0.9%NaCl溶液中的纤维素酶在注射前与弗氏佐剂混合。以一周间隔将兔免疫10次。通过硫酸铵沉淀(25%饱和)纯化免疫球蛋白G组分(IgG)。在水中溶解沉淀,然后对乙酸钠缓冲液(pH5.0,50mM)(随去离子水的改变而改变)进行彻底透析。过滤后,IgG组分由叠氮化钠(0.01%)稳定。
利用琼脂平板中的免疫扩散,三个纤维素酶都和其同源的抗血清形成单一的免疫沉淀物,在3个克隆的纤维素酶和抗其它两种纤维素酶产生的抗血清之间没有见到沉淀。
H-I.在缓冲液中测量构建体1内切葡聚糖酶(SEQ ID No.2)除去表面纤丝和除去含纤维素纤维的织物中突出的纤维的性能
仪器:Terg-O-tometer
液体体积:100ml
搅拌:150次/分钟(rpm)
冲洗时间:自来水5分钟
洗涤温度:40℃
水硬度:1mM CaCl2
洗涤液体:0.05M磷酸盐缓冲液
pH:7.0
洗涤时间:30分钟
重复:2次
织物:2块旧黑色100%棉布样品,5×6cm
干燥:滚动干燥
评价:
由Macbeth Color Eye7000反射分光光度计测量光的反射。将反射值计算成ΔL(Hanter实验室值)。当由纤维素酶除去表面纤丝和除去纱中突出的纤维时,黑色织物的表面看起来更亮,并得到更低的L值。
结果:
S-CEVU/l | 0 | 250 | 1000 |
本发明酶 | 0 | -1.4 | -1.6 |
所得的数据显示在试验条件下,本发明的酶给出很好的颜色澄清度。
H-II.在缓冲液中测定克隆的梭孢壳属的内切葡聚糖酶(SEQ ID No.9)除去表面纤丝和除去含纤维素纤维的织物中突出的纤维的性能
仪器:Terg-O-tometer
液体体积:100ml
搅拌:150次/分钟,垂直搅拌
冲洗时间:自来水10分钟
洗涤温度:40℃
洗涤液体:0.05M磷酸盐缓冲液
pH:7.0
洗涤时间:30分钟
重复:2次
织物:2块旧黑色100%棉布样品,5×6cm
干燥:滚动干燥
评价:
由Macbeth Color Eye7000反射分光光度计测量光的反射。将反射值计算成ΔL(Hanter实验室值)。当由纤维素酶除去表面纤丝和除去纱中突出的纤维时,黑色织物的表面看起来更黑和更好,并得到更低的L值。
结果:
S-CEVU/l | 0 | 50 | 1200 |
本发明酶 | 0 | -0.66±0.10 | -1.32±0.06 |
所得的数据显示在试验的条件下,本发明的酶给出很好的颜色澄清度。
H-III.在缓冲液中测定Volutella colletrichoides的内切葡聚糖酶(SEQ ID No.17)除去表面纤丝和除去含有纤维素纤维的织物中突出的纤维的性能
仪器:Terg-O-tometer
液体体积:100ml
搅拌:150次/分钟,垂直搅拌
冲洗时间:自来水5分钟
洗涤温度:40℃
洗涤液体:0.05M磷酸盐缓冲液
pH:7.0
洗涤时间:30分钟
重复:2次
剂量:2.5S-CEVU/ml
织物:2块旧黑色100%棉布样品,5×6cm(0.9克)
干燥:滚动干燥
评价:
由Datacolor Elrepho反射分光光度计测量光的反射。将反射值计算成ΔL(Hanter实验室值)。当由纤维素酶除去表面纤丝和除去纱中突出的纤维时,黑色织物的表面看起来更黑,并得到更低的L值。
将此样品和对照样品(即没有酶洗涤的样品)比较:
没有纤维素酶 有纤维素酶
0.00 -0.57
和对照样品比较的ΔL反射值。
所得的数据显示在试验条件下,Volutellh colletrichoides纤维素酶给出很好的颜色澄清度。
H-IV.在高pH高载洗涤剂中测量克隆的Thielavia terrestris和Aclemonium sp.CBS 478.94的纤维素酶除去表面纤丝和除去含有纤维素纤维的织物中突出的纤维的性能
仪器:Terg-O-tometer
液体体积:150ml
搅拌:150次/分钟,垂直搅拌
冲洗时间:自来水10分钟
洗涤温度:35℃
洗涤液体:1.0g/l的US型HDG(沸石/苏打助剂,阴离子/非离子重量比>2.5)
pH:10.0
硬度:1.0mMCaCl2
0.34mM MgCl2
洗涤时间:12分钟
重复:6次
织物:2块旧黑色棉布样品,5×6cm(约150g/m2)
2块深色针织棉布样品,5×6cm(约600g/m2)
干燥:滚动干燥
评价:
由Datacolor Elrepho反射分光光度计测量光的反射。将反射值计算成ΔL(Hanter实验室值)。当由纤维素酶除去表面纤丝和除去纱中突出的纤维时,黑色织物的表面看起来更黑和更好,并得到更低的L值。分别试验了Thielavia terrestris(SEQ ID NO:9)和Acremonium sp.CBS 478.94(SEQID NO:5)的克隆纤维素酶的不同剂量(分别称为A和B)。
结果:
S-CEVU/l | 0 | 500 | 2000 |
A | 0 | -2.09±0.22 | -2.86±0.19 |
B | 0 | -0.60±0.36 | -1.96±0.23 |
所得的数据显示在试验条件下,两种纤维素酶都给出很好的颜色澄清度。
H-V.测量从Thielavia terrestris和Aclemonium sp.CBS 478.94以及构建体1(SEQ ID No.2)克隆的纤维素酶除去表面纤丝和除去含纤维素纤维的织物中突出的纤维的性能
仪器:Terg-O-tometer
液体体积:150ml
搅拌:150次/分钟,垂直搅拌
冲洗时间:自来水10分钟
洗涤温度:35℃
硬度:1.0mM CaCl2
0.34mM MgCl2
洗涤液体:2.0g/l的HDL(中性,柠檬酸助剂HDL,非离子/阴离子重量比>0.5)
pH:7.0
洗涤时间:30分钟
重复:2次
织物:2块旧黑色棉布样品,5×6cm(约150g/m2)
2块深色针织棉布样品,4×7cm(约600g/m2)
干燥:滚动干燥
评价:
由Datacolor Elrepho反射分光光度计测量光的反射。将反射值计算成ΔL(CIE实验室值)。当由纤维素酶除去表面纤丝和除去纱中突出的纤维时,黑色织物的表面看起来更黑和更好,并得到更低的L值。分别试验了Thielavia terrestris(SEQ ID NO:9)和Acremonium sp.CBS 478.94(SEQID NO:5)及构建体1(SEQ ID NO:2)的克隆纤维素酶的不同剂量(分别称为A和B及C)。
结果:
S-CEVU/l | 0 | 100 | 200 | 400 |
A | 0 | -3.06±0.24 | -3.15±0.27 | -3.92±0.26 |
B | 0 | -1.75±0.27 | -3.08±0.32 | -3.51±0.44 |
C | 0 | -1.84±0.39 | -1.70±0.47 | -2.30±0.61 |
所得的数据显示在试验条件下,所有的纤维素酶都给出很好的颜色澄清度。
I.应用Thielavia terrestris和Acremonium sp.及构建体1(SEQ ID NO.2)的内切葡聚糖酶对斜纹粗棉布修整
实验
仪器:洗涤机Wascator FL 120
液体体积:20升
织物:1.1kg斜纹粗棉布织物,14.5OZ 100%棉布
脱浆:10分钟,55℃,pH 7
50ml Aquazyme 120L
2.5g/l磷酸盐缓冲液
磨蚀:2小时;
pH和温度根据下表变化:
酶 | 活性 | pH/温度 | 缓冲液系统 |
SEQ ID No.2 | 1400S-CEVU/g | 6/55℃ | 2.5g/l磷酸盐缓冲液 |
No.9 | 292S-CEVU/g | 5/65℃ | 1g/l柠檬酸缓冲液 |
No.5 | 782S-CEVU/g | 7/45℃ | 2.5g/l磷酸盐缓冲液 |
灭活:15分钟,80℃
1g/l碳酸钠
冲洗:在冷的自来水中,三个冲洗循环,各5分钟
评价:
利用Texflash 2000作为磨蚀水平的测量手段,在420nm下测定织物的反射。
用本发明的不同内切葡聚糖酶处理斜纹粗棉布织物,结果列于下表:
酶 | 剂量 | 实验条件 | 磨蚀420nm |
空白 | 0S-CEVU/g织物 | pH 6,55℃ | 9.96 |
SEQ ID No.2 | 10S-CEVU/g织物 | pH 6,55℃ | 14.37 |
空白 | 0S-CEVU/g织物 | pH 5,65℃ | 9.26 |
SEQ ID No.9 | 10S-CEVU/g织物 | pH 5,65℃ | 16.86 |
空白 | 0S-CEVU/g织物 | pH 7,45℃ | 9.47 |
SEQ ID No.5 | 10S-CEVU/g织物 | pH 7,45℃ | 14.08 |
在斜纹粗棉布实验中,所有试验纤维素酶都显示极好的性能,尽管每一种酶有其自身的作用方式。当在斜纹粗棉布实验中应用SEQ ID NO:2的酶时,可能达到较高的磨蚀水平,同时强度损失很小。当使用SEQ ID NO:9的酶处理斜纹粗棉布时,可以达到非常高的洗褪效果,几乎使织物达到漂白的外观。当使用SEQ ID NO:5的酶进行斜纹粗棉布实验时,在较低的最佳温度下,能达到很高的磨蚀水平,这使得可能减少加热并节约能源。
J.Acremonium sp.和Thielavia terrestris的克隆纤维素酶用于Lyocell纤维的生物抛光
以商品名Tencel出售的Lyocell纤维是在以水为基础的溶剂中由木浆纤维素纺成的,所用的溶剂较用于正常粘胶纤维产生的溶剂更有利于环保。然而,当把此种纤维加工成织物时,其有形成纤丝的趋势,这种情况在织物表面可见,并称为“绒毛”。利用纤维素酶,有可能永久地除去这种暴露的绒毛状的纤维,极大地改进成品织物的外观,这种处理一般称为“生物抛光”。本发明的内切葡聚糖酶尤其适于除去Lyocell表面的纤维。
材料和方法
纺织底物或者是100%编织的或者是不同种的深蓝色的针织运动衫的Tencel。为了提高视觉效果,黑色的和编织的运动衫是优选的,这使评价简单化。编织的70/30Tencel/Rayon也可以限量使用。
或者以200ml的规模,利用Launder-O-meter完成测定;或者以20升的规模,利用Wascator完成测定。处理时间是wascator中55℃,60分钟;LOM中60-90分钟。缓冲液为2g/l的乙酸钠(用醋酸调整pH至5)。织物和液体的比率是1∶10,但是在Launder-O-meter中,使用了20个直径14mm的钢球(每个11克),以获得足够的机械磨蚀效果。生物抛光后,立即在2g/l的碳酸钠中80℃下进行灭活15分钟,之后用冷水冲洗。
利用从1到5的绒毛分值评价所得的结果,其中1代表起始材料的纤丝的外观,5代表高质量的外观,其表面上没有可见的纤维。既然内切纤维素酶是特别针对表面处理的,重量的损失低于2%,因此此项不包括在评价的指标中。评价了两种纤维素酶:Acremonium sp.(SEQ ID NO.5)和Thielavia terrestris(SEQ ID NO.9)的克隆纤维素酶。
两种纤维素酶对Tencel及Tencel混合的织物都能去纤丝。利用本发明的内切葡聚糖酶,除去的只是很小的纤丝,而当利用木霉属的酸性纤维素酶混合物时,除去的是整个纤维。因此,利用本发明的内切葡聚糖酶时,被处理织物的强度损失保持在最小水平。
下列剂量给出了良好的去纤丝作用,即绒毛分值为4或者以上:
每克织物15S-CEVU的Acremonium sp.纤维素酶(SEQ ID NO:5);和
每克织物10S-CEVU的Thela via terrestris纤维素酶(SEQ ID NO:9)。
实施例2
通过表达克隆以及通过PCR克隆检测由植物病原体产生的新的溶纤酶,这种植物病原体从大豆种子中分离出来,并鉴定为Macrophominaphaseolina。
产生供PCR的生物量和表达克隆的方法:
使CBS 281.96的分离物在振荡烧瓶培养器中在富含纤维素马铃薯右旋糖培养液中生长,,在26℃下培养5天(振荡条件:150rpm)。
A.Macrophomina phaseolina的内切葡聚糖酶的克隆和表达
从Macrophomina phaseolina分离mRNA,这种病原体生长在包含纤维素的发酵培养基中,搅拌以确保通气良好。在生长3-5天之后收获菌丝,立即在液氮中冷冻,并保存在-80℃。按所述方法,用1%的载体背景在大肠杆菌中构建Macrophomina phaseolina的含有大约106单个克隆的文库。
用一些库的质粒DNA转化酵母,并从每一个库中获得包含250-400个酵母菌落的50-100个平板。
鉴定内切葡聚糖酶阳性菌落,并通过AZCL HE纤维素测定方法在SC琼脂平板上分离。从酵母菌落上直接扩增cDNA插入物,并如上面的材料和方法部分的描述进行其性质分析。SEQ ID NO:10中显示了编码内切葡聚糖酶的cDNA的DNA序列,SEQ ID NO:11中显示了相应的氨基酸序列。
从DSM 10512质粒中能够获得该cDNA。
从酵母菌落分离总DNA,并通过转化如上述的大肠杆菌救援质粒DNA。为了在曲霉属中表达所说的内切葡聚糖酶,用适当的限制酶消化所说的DNA,在凝胶上对各个片断进行分级分离,将相应于内切葡聚糖酶基因的片段纯化。将得到的基因连接到用适当的限制酶消化的pHD414上,结果形成质粒pA2C477。
在大肠杆菌中进行DNA扩增之后,用所说的质粒转化上述的米曲霉。通过杂交筛选cDNA文库和阳性克隆的特征分析
利用随机引物32P-标记的M.phaseolina的PCR产物作为杂交探针筛选大肠杆菌中的Macrophomina phaseolina cDNA文库的大约6000克隆形成单位(c.f.u.)。如材料和方法部分中的描述产生PCR产物。通过对cDNA插入物末端进行测序和通过确定两条链中最长的cDNA的核苷酸序列而确定阳性cDNA克隆。SEQ ID NO:10显示了编码内切葡聚糖酶的cDNA的DNA序列,SEQ ID NO:11显示了相应的氨基酸序列。
B.Macrophomina phaseolina的内切葡聚糖酶和Humicola insolens的43kD内切葡聚糖酶基因融合体的构建
制备一种构建体的目的是制造M.phaseolina的内切葡聚糖酶的衍生物,这种衍生物具有H.insolens(在WO 91/17243中公开)的43kD内切葡聚糖酶的接头和CBD。M.phaseolina的天然内切葡聚糖酶没有接头和/或纤维素结合域CBD。
此构建体由M.phaseolina的内切葡聚糖酶(223个氨基酸)和H.insolens的43kD内切葡聚糖酶的72个C-末端氨基酸组成。
将H.insolens的43kD内切葡聚糖酶的cDNA以此内切葡聚糖酶基因从Taka-启动子转录的方式克隆到pHD414中。形成的质粒命名为pCaHj418。
将编码M.phaseolina的内切葡聚糖酶的cDNA作为BstX I/Not I片段克隆到pYES2.0中,形成的质粒命名为pC1C477。
引物:
引物1:
5′-GGTCGCCCGGACTGGCTGTTCCCGTACCCCCTCCAGCAGCACCAGCTCTCCGG-3′
引物2:
5′-CCGGAGAGCTGGTGCTGCTGGAGGGGGTACGGGAACAGCCAGTCCGGGCGACC-3′
pYES2.0F.HT引物:5′-CGGACTACTAGCAGCTGTAATACG-3′
AMG-term.引物:5′-CCCCATCCTTTAACTATAGCG-3′
通过如Higuchi等(1988)描述的PCR重叠延伸方法构建内切葡聚糖酶融合体。
反应A:利用聚合酶链反应(PCR)扩增引物1和AMG-term.引物之间的pCaHj418的片段(H.insolens的43kD内切葡聚糖酶的接头与CBD部分)。
反应B:pYES2.0F.HT引物和引物2之间的pC1C477的片段(M.phaseolina的内切葡聚糖酶基因)的PCR扩增。
反应C:在整个侧翼区引物(即pYES2.0F.HT引物和AMG-term.引物)存在的情况下,在第三个PCR中利用前面的两个纯化的片段。
纯化反应C中扩增的片段,以限制酶Xba I和BamH I消化。将纯化的消化片段连接在以限制酶Xba I和BamH I消化的pHD414上。
用连接的质粒转化大肠杆菌菌株DH5αF′(新英格兰生物实验室)的感受态细胞,并分离包含基因融合体的菌落。通过DNA测序验证克隆部分的序列。
在如Perkin-Elmer推荐的标准条件下进行聚合酶链反应。
反应A和B以94℃2分钟开始,之后是20个循环(30秒钟,94℃;30秒钟,52℃;1分钟,72℃),并以72℃4分钟结束。
反应C以(2分钟,94℃;1分钟,52℃;和2分钟,72℃)开始,之后是20个循环(30秒钟,94℃;30秒钟,52℃;90秒钟,72℃),并以72℃4分钟结束。
如上面所述,将此构建体转化到米曲霉中。
实施例3
Acremonium sp.和粪生粪壳的内切葡聚糖酶的克隆和表达。
表达克隆的生物量的产生方法:
使CBS 478.94的分离物和ATCC 52644分别在振荡烧瓶培养器中在富含纤维素的马铃薯右旋糖培养液中生长,在26℃下培养5天(振荡条件:150rpm)。
分别从Acremonium sp.CBS 478.94和粪生粪壳ATCC 52644中分离mRNA,这两种生物体生长在包含纤维素的发酵培养基中,搅拌以确保通气良好。在生长3-5天之后收获菌丝,立即在液氮中冷冻,并保存在-80℃。如上所述,用1%的载体背景在大肠杆菌中分别构建Acremonium sp.CBS478.94和粪生粪壳ATCC 52644(每个含有大约106单个克隆)的文库。
用每一个文库中一些集合质粒DNA转化酵母,并从每一个集合中获得包含250-400个酵母菌落的50-100个平板。
鉴定内切葡聚糖酶阳性菌落,并通过AZCL HE纤维素测定方法在SC琼脂平板上分离。从酵母菌落上直接扩增cDNA插入物,并如上面的材料和方法部分的描述进行其性质分析。
SEQ ID NO:6中显示了编码Acremonium sp.的内切葡聚糖酶的cDNA的DNA序列,SEQ ID NO:7中显示了相应的氨基酸序列。从DSM 10080的质粒中能够获得此cDNA。
SEQ ID NO:19中显示了编码粪生粪壳的内切葡聚糖酶之cDNA的部分DNA序列(cDNA的5′末端的核苷酸序列),SEQ ID NO:20显示了相应的氨基酸序列。从DSM 10576的质粒中能够获得此cDNA。
从酵母菌落分离总DNA,并通过转化如上述的大肠杆菌救援质粒DNA。为了在曲霉属中表达所说的内切葡聚糖酶,用适当的限制酶消化所说的DNA,在凝胶上对各个片断进行分级分离,将分别相应于Acremonium sp.和粪生粪壳的内切葡聚糖酶基因的片段纯化。将得到的基因连接到用适当的限制酶消化的pHD414上,结果分别形成质粒pA2C371和pA2C502。
在大肠杆菌中进行DNA扩增之后,用所说的质粒转化上述的米曲霉。
实施例4
A.由PCR克隆Crinipellis scabella CBS 280.96的内切葡聚糖酶
使CBS 280.96的分离物在静态的烧瓶培养器中含小麦麸的培养基(每烧瓶:300g小麦麸添加450ml的盐溶液)上生长,其中,在26℃下培养6天。培养后,以蒸馏水抽提小麦麸(每烧瓶300ml),并在1%琼脂糖(Litex琼脂糖Medinova)中检验提取物的内切葡聚糖酶活性(0.1%AZCL-HE-纤维素(megazyme))。在pH为3.0,7.0和9.5的平板上观察活性。
从如上所述生长的Crinipellis sca bella中分离mRNA。在生长3-5天之后收获菌丝,立即在液氮中冷冻,并保存在-80℃。如上所述,用1%载体背景,在大肠杆菌中构建Crinipellis scabella(每个含有大约106单个克隆)的文库。
利用随机引物32P-标记的C.scabella的PCR产物作为杂交探针,筛选大肠杆菌中的Crinipellis scabellacDNA文库的大约10000克隆形成单位(c.f.u.)。如材料和方法部分中的描述产生PCR产物。通过对cDNA插入物末端进行测序和通过确定两条链中最长的cDNA的核苷酸序列而确定阳性cDNA克隆。
SEQ ID NO:12显示了编码内切葡聚糖酶的cDNA的DNA序列,SEQ ID NO:13显示了相应的氨基酸序列。
可以从DSM 10511中的质粒获得此cDNA。
从酵母菌落分离总DNA,并通过转化如上述的大肠杆菌救援质粒DNA。为了在曲霉属中表达所说的内切葡聚糖酶,用适当的限制酶消化所说的DNA,在凝胶上对各个片段进行分级分离,将分别相应于所说的内切葡聚糖酶基因的片段纯化。接下来将得到的基因连接到用适当的限制酶消化的pHD414上,结果形成质粒pA2C475。
在大肠杆菌中进行DNA扩增之后,用所说的质粒转化上述的米曲霉。Crinipellis scabella的内切葡聚糖酶和Humicola insolensinsolens的43kDa的内切葡聚糖酶的接头/CBD区的基因融合体的构建
Crinipellis scabella的天然内切葡聚糖酶既没有接头也没有纤维素结合域(CBD)。此外,全长cDNA在编码内切葡聚糖酶的开放读框(ORF)的上游包含ATG起始密码子,这可能导致基于异源cDNA表达的混杂翻译的起始,如在酵母(啤酒酵母)和丝状真菌(米曲霉)中。这样,利用通过重叠延伸的剪接(SOE)已经构建了Crinipellis scabella的内切葡聚糖酶和Humicolainsolens的43kD的内切葡聚糖酶的接头/CBD区(在WO 91/17243中公开)的两个基因融合体(Horton等,1989)。
构建体1由编码C.scabella的内切葡聚糖酶的226个残基的cDNA组成,此cDNA通过PCR与H.insolens的编码位于H.insolens 43kD内切葡聚糖酶的COOH-末端的接头和CBD区(72个氨基酸)的cDNA的3′-末端连接。第二个杂交构建体和前述的基因构建体相同,只是通过PCR缺失了推定的信号肽的前5′个残基,结果使信号肽变短,此信号肽从第二个框内起始密码子开始。
质粒构建体
质粒pC1C475包含C.scabella的全长cDNA,将其克隆到BstXI/NotI-切口酵母表达载体pYES 2.0中;质粒pC1C144包含H.insolens的全长cDNA,将其克隆到pYES 2.0的BstXI位点上。
经重叠延伸的剪接
利用50-100ng的pC1C475为模板,各300-350pmol的正向引物(正向引物1:5′-CCCCAAGCTTGACTTGGAACCAATGGTCCATCC-3′;正向引物2:5′-CCCCAAGCTTCCATCCAAACATGCTTAAAACGCTCG-3′),250pmol的反向引物(5′-GACCGGAGAGCTGGTGCTGCTGGAGGGTTTACGAACACAGCCCGAGATATTAGTG-3′),DNA热循环仪(Landgraf,德国)和2.5单位的Taq聚合酶(Perkin-Elmer,Cetus,USA),在PCR缓冲液(10mM Tris-HCl,pH8.3;50mM KCl;1.5mMMgCl2;0.01%明胶;包含每种dNTP 200μM)中产生编码C.scabella的内切葡聚糖酶的核心区的两个PCR片段。利用循环方式(94℃变性1分钟;55℃退火2分钟;72℃延伸3分钟)进行三十个PCR循环。利用100ng的pC1C144作为模板,250pmol的正向引物(5′-CACTAATATCTCGGGC-TGTGTTCGTAAACCCTCCAGCAGCACCA-GCTCTCCGGTC-3′),250pmol的pYES 2.0反向引物(5′-GGGCGTGAATGTAAGCGTGACATA-3′),DNA热循环仪(Landgraf,德国)和2.5单位的Taq聚合酶(Perkin-Elmer,USA),在PCR缓冲液(10mMTris-HCl,pH8.3;50mM KCl;1.5mM MgCl2;0.01%明胶;包含每种dNTP200(μM)中产生编码H.insolens的内切葡聚糖酶的接头和CBD的PCR片段。如上文进行三十个PCR循环。将PCR产物在0.7%低胶凝温度的琼脂糖凝胶(SeaPlaque,FMC)中进行电泳,从凝胶中切割目的片段,并按照制造商的说明通过琼脂糖酶(新英格兰生物实验室,美国)处理,之后是苯酚抽提和在-20℃下通过加入2体积的96%EtOH和0.1体积的3M NaAc乙醇沉淀12小时回收目的片段。
通过在两种组合的PCR缓冲液(10mM Tris-HCl,pH8.3;50mM KCl;1.5mM MgCl2;0.01%明胶;包含每种dNTP 200μM)中组合上述的重叠PCR片段(每个模板约50ng)产生Crinipellis scabella的内切葡聚糖酶和Humicolainsolen的43kD的内切葡聚糖酶的接头/CBD区的重组杂合基因。利用DNA热循环仪(Landgraf,德国)和2.5单位的Taq聚合酶(Perkin-Elmer,Cetus,USA)进行SOE反应。利用循环方式(94℃变性1分钟;55℃退火2分钟;72℃延伸3分钟)进行二个PCR循环,终止反应,向反应混合物中加入各末端引物(正向引物1:5′-CCCCAAGCTTGACTTGGAACCAATGGTCCATCC-3′;正向引物2:5′-CCCCAAGCTTCCATCCAAACATGCTTAAAACGCTCG-3′;反向引物:5′-GGGCGTGAATGTAAGCGTGACATA-3′),利用循环方式(94℃变性1分钟;55℃退火2分钟;72℃延伸3分钟)进行另外三十个PCR循环。
用于米曲霉中异源表达的表达盒的构建
将PCR产生的重组片段在0.7%低胶凝温度的琼脂糖凝胶(SeaPlaque,FMC)中进行电泳,从凝胶中切割目的片段,并按照制造商的说明通过琼脂糖酶(新英格兰生物实验室,美国)处理,之后是苯酚抽提和在-20℃下乙醇沉淀12小时回收目的片段。以HindIII和XbaI进行DNA片段消化,将DNA片段连接在HindIII/XbaI-切割的pHD414载体上,之后按照制造商的说明将构建体电穿孔到大肠杆菌DH10B细胞(生命技术,美国)中。
如材料和方法部分所描述的,从两条链测定形成的基因融合体的核苷酸序列,SEQ ID NO:14A和15A。如所描述的,这些构建体可以转化米曲霉。
实施例5
从46个丝状真菌和单轴真菌(monocentric fungi)中用PCR检测所说的溶纤酶类型,这些真菌代表23个科的32个属,属于7个纲的15个目,总而言之包括真菌的所有4个组:子囊真菌、担子真菌、壶真菌和接合真菌
5.1材料
1.棉色二孢
菌株的保藏,保藏号:CBS 274.96
2.Ulospora bilgramii(Hawksw等)Hawksw等
菌株的保藏号:NKBC 1444,
3.Microsphaeropsis sp
4.Ascobolus stictoideus Speg.
菌株的保藏号:Q026(Novo Nordisk保藏中心)
分离自鹅粪,Svalbard,挪威
5.Saccobolus dilutellus(Fuck)Sacc.
菌株的保藏:保藏号CBS 275.96
6.疣孢青霉Peyronel
物种的保藏号:ATCC 62396
7.产黄青霉Thom
菌株的保藏号:ATCC 9480
8.Thermomyces verrucosus Pugh等
菌株的保藏:保藏号CBS 285.96
9.鹿角团炭角菌L.ex Greville
菌株的保藏:保藏号CBS 284.96
10.点孔座壳(Fr.ex L.)Fr.
参见:A.Munk:丹麦Pyrenomycetes,Dansk Botanisk Arkiv,Vol17,1 1957
11.Nodulisporum sp
分离自在中国云南省昆明植物园中生长的山茶的叶片(茶科,Guttiferales)
12.Cylindrocarpon sp
分离自海上样品,Bahamas
13.蛇形镰孢Sherbakoff
菌株的保藏号:IFO 4467
14.早熟禾镰孢(Peck)Wr.
物种的保藏号:ATCC 60883
15.腐皮镰孢(Mart.)Sacc.emnd.Snyd & Hans.
菌株的保藏号:IMI 107.511
16.番茄尖镰孢(Sacc.)Snyd.& Hans.
菌株的保藏号:CBS 645.78
17.尖镰孢ssp passiflora
菌株的保藏号:CBS 744.79
18.链孢粘帚霉Gillman & Abbott
菌株的保藏号:ATCC 10523
19.Nectria pinea Dingley
菌株的保藏,保藏号CBS 279.96
20.大孢粪壳Auerswald
物种的保藏号:ATCC 60255
21.灰腐质霉Traeen
物种的保藏号:ATCC 22726
22.黑腐质霉omvik
菌株的保藏号:CBS 819.73
23.Scytalidium thermophilum(Cooney et Emerson)Austwick
菌株的保藏号:ATCC 28085
24.Thielavia thermophila Fergus et Sinden(别名Corynascusthermophilus)
菌株的保藏号:CBS 174.70,IMI 145.136
25.Cladorrhinum foecundissimum Saccardo et Marchal
物种的保藏号:ATCC 62373
26.Syspastospora boninensis
菌株的保藏号:NKBC 1515(日本大学,profe Tubaki保藏中心)
27.管毛壳Fuckel
菌株的保藏号:CBS 799.83
28.巴西毛壳Batista et Potual
菌株的保藏号:CBS 122.65
29.墙毛壳Corda
菌株的保藏号:CBS 163.52
30.Chaetomium virescens(von Arx)Udagawa
菌株的保藏号:CBS 547.75
31.Nigrospora sp
菌株的保藏:保藏号CBS 272.96
32.Nigrospora sp
分离自:
33.Diaporthe syngenesia
菌株的保藏:保藏号CBS 278.96
34.葫芦科刺盘孢(Passerini)Ellis et Halsted
别名围小丛壳Var orbiculare Jenkins et Winstead
物种的保藏号:ATCC 52609
35.黑胶耳Fr.
菌株的保藏:保藏号CBS 277.96
36.木蹄层孔菌(L.)Fr.
菌株的保藏:保藏CBS 276.96
37.绵皮孔菌属(?)
菌株的保藏号:CBS 283.96
38.红根囊壶菌(de Bary & Wor)Fischer
菌株的保藏:保藏号:CBS 282.96
39.Rhizomucor pusillus(Lindt)Schipper
别名:微小毛霉
菌株的保藏号:IFO 4578
40.闪光须霉(Kunze)vanTieghem & Le Monnier
菌株的保藏号:IFO 4814
41弗雷生刺枝霉vanTieghem & Le Monnier
别名:Helicostylum fresenii
菌株的保藏号:NRRL2305
42.粉红单端孢
菌株的保藏号:IFO 5372
43.Coniothecium sp Endophyte
分离自中国云南省昆明的鲜花植物的叶片
44.菌株的保藏物:保藏号CBS 271.96
Coelomycete,分离自牙买加Christiana的Artocarpus altilis的叶片(桑科,Urticales)
45.菌株的保藏物:保藏号CBS 273.96
Coelomycete,分离自牙买加达拉斯山的Pimenta dioica(桃金娘科,Myrtales)的叶片
46.菌株的保藏号:CBS 270.96
Coelomycete,分离自生长在牙买加达拉斯山的Pseudocalymmaalliaceum(Bignoniaceae,Solanales)的叶片
5.2方法
菌株的保持和生物量的产生:
将菌株保持在培养皿(9cm)中的琼脂或斜面上(参见培养基表:PCA和PDA)。在以下生长条件之下在摇瓶中培养44种菌株:如PC、PD和PB 9或YPG的普通培养基(参见培养基表);培养时间3至9天;温度26℃;rpm在175-150之间。使14号菌株(F.poae)在小麦麸上生长15天(26℃;静态)。使38号菌株在加有1cm2高压灭菌滤纸片的稀释的盐溶液(DS/2)中生长。
活性试验:
在由1%琼脂糖(HSB,Litex琼脂糖,Medinova)制成的0.1%AZCL-HE-纤维素(Megazyme)平板(14cm培养皿)上试验活性。所有试验均以3份进行,即将AZCL-HE-纤维素溶解在三种缓冲液中,调节至pH 3,7或9.5(使用各种比例的以下两种组分:一水柠檬酸单水合物,Merck产品号100244(21.0g),溶解在水中,使总体积为1000毫升;0.1Mdodecabrohydrate三钠,Merck产品号6578(38g),溶解在水中,使总体积为1000毫升。在临用前混合。
收获生物量:
通过过滤(根据真菌的生长调节滤器网眼,最细的用于具有高度孢子形成菌丝体的真菌,例如Fusarium spp.)收获生物量。将在滤器上的生物量刮至无菌塑料袋中,并立即冷冻(掩没到液氮中)。
5.3结果
I.使用材料和方法中描述的PCR筛选与扩增技术,获得了下列部分cDNA序列:
Saccobolus dilutellus(Fuck)Sacc.CBS 275.96:SEQ ID NO:21(和在SEQ ID NO:22中的推定的氨基酸序列);
Thermomyces verrucosus CBS 285.96:SEQ ID NO:23(和在SEQ ID NO:24中的推定的氨基酸序列);
鹿角团炭角菌CBS 284,96:SEQ ID NO:25(和在SEQ ID NO:26中的推定的氨基酸序列);
番茄尖镰孢CBS 645.78:SEQ ID NO:27(和在SEQ ID NO:28中的推定的氨基酸序列);
Nectria pinea CBS 279.96:SEQ ID NO:29(和在SEQ ID NO:30中的推定的氨基酸序列);
灰腐质霉ATCC 22726:SEQ ID NO:31(和在SEQID NO:32中的推定的氨基酸序列);
黑腐质霉CBS 819.73:SEQ ID NO:33(和在SEQ ID NO:34中的推定的氨基酸序列);
Cladorrhinum foecundissimum ATCC 62373:SEQ ID NO:35(和在SEQID NO:36中的推定的氨基酸序列);
Syspas tospora boninensis NKBC 1515:SEQ ID NO:37(和在SEQ IDNO:38中的推定的氨基酸序列);
Nigrospora sp.CBS 272.96:SEQ ID NO:39(和在SEQ ID NO:40中的推定的氨基酸序列);
弗雷生刺枝霉:SEQ ID NO:41(和在SEQ ID NO:42中的推定的氨基酸序列);
黑胶耳CBS 277.96:SEQ ID NO:43(和在SEQ ID NO:44中的推定的氨基酸序列);
Coniothecium sp.:SEQ ID NO:45(和在SEQ ID NO:46中的推定的氨基酸序列);
保藏物CBS 271.96:SEQ ID NO:47(和在SEQ ID NO:48中的推定的氨基酸序列);
保藏物CBS 270.96:SEQ ID NO:49(和在SEQ ID NO:50中的推定的氨基酸序列);
棉色二孢CBS 274.96:SEQ ID NO:51(和在SEQ ID NO:52中的推定的氨基酸序列);
Ulospora bilgramii NKBC 1444:SEQ ID NO:53(和在SEQ ID NO:54中的推定的氨基酸序列);
疣孢青霉ATCC 62396:SEQ ID NO:55(和在SEQ ID NO:56中的推定的氨基酸序列);
点孔座壳:SEQ ID NO:57(和在SEQ ID NO:58中的推定的氨基酸序列);
蛇形镰孢,IFO 4467:SEQ ID NO:59(和在SEQ ID NO:60中的推定的氨基酸序列);
Thielavia thermophila CBS 174.70:SEQ ID NO:61(和在SEQ ID NO:62中的推定的氨基酸序列);
管毛壳CBS 799.83:SEQ ID NO:63(和在SEQ ID NO:64中的推定的氨基酸序列);
Chaetomium virescens:SEQ ID NO:65(和在SEQ ID NO:66中的推定的氨基酸序列);
葫芦科刺盘孢:SEQ ID NO:67(和在SEQ ID NO:68中的推定的氨基酸序列);
闪光须霉:SEQ ID NO:69(和在SEQ ID NO:70中的推定的氨基酸序列);和
粉红单端孢:SEQ ID NO:71(和在SEQ ID NO:72中的推定的氨基酸序列)。
II.使用材料和方法中描述的PCR筛选与扩增技术,获得了部分编码本发明的酶的部分cDNA序列,按照布达佩斯条约保藏了质粒:
大肠杆菌,DSM 10583,保藏日1996年3月13日;
来源于粉红单端孢的cDNA;
大肠杆菌,DSM 10584,保藏日1996年3月13日;
来源于Syspastospora boninensis的cDNA;
大肠杆菌,DSM 10585,保藏日1996年3月13日;
来源于Cheatomium murorum的cDNA;
大肠杆菌,DSM 10587,保藏日1996年3月13日;
来源于粪生粪壳的cDNA;
大肠杆菌,DSM 10588,保藏日1996年3月13日;
来源于未鉴别的菌株CBS 273.96的cDNA;
大肠杆菌,DSM 10586,保藏日1996年3月13日;
来源于Spongipellis sp的cDNA。
粗上清液的颜色澄清作用
在正常的洗涤期间,织物常常褪色。然而,如果织物用使颜色澄清的纤维素酶洗涤,则织物的外观得到改善,原来的颜色得到更好地保持或保留。以除去含纤维素纤维的织物纱突出的表面纤丝和纤维的作用测定颜色的澄清作用。
装置:Terg-o-tometer
液体体积:100毫升
搅拌:用垂直搅拌器150次/分钟
冲洗时间:在自来水中5分钟
洗涤温度:40℃
洗涤液:0.05M磷酸盐缓冲液
pH :7.0
洗涤时间:30分钟
重复:2次
酶:以下所示菌株的粗上清液
剂量:200,500,1000或2500S-CEVU/l的两种剂量
织物:2块旧黑100%棉布,5x6cm(0.9克)
干燥:滚动干燥
评价:
经Datacolor Elrepho反射分光光度测量反发射。以ΔL(Hunter实验值)计算反射。当从纱突出的表面纤丝和纤维被纤维素酶除去时,黑色的织物的表面显得更黑,获得更低的L值。
将样品与一种对照样品(即不用酶洗涤)比较。以下显示了与对照样品比较的ΔL R反射值。
ECU/l
菌株 200 500 2000 2500
13.蛇形镰孢 n.t. -0.71 n.t. -1.28
15.腐皮镰孢 n.t. -0.96 n.t. -1.37
24.Thieiavia thermophila -0.30 n.t. -1.25 n.t.
25.Cladorrhinum foecun. n.t -1.79 n.t. -2.18
37.Spongipeliis(?) n.t. -1.01 n.t. -1.63
39.Rhizomucor pusillus n.t. -1.90 n.t. -2.66
41.弗雷生刺枝霉 n.t. -0.17 n.t. -1.33
45.保藏号:CBS273.96 n.t. -1.31 n.t. -1.20
数据表明,在试验条件下,所有菌株都给出良好的澄清作用(n.t.=在这一剂量下来试验)。
序列表
(1)一般信息:
(i)申请人:
(A)姓名:Novo Nordisk A/S
(B)街道:Nova Aile
(C)城市:DK-2880 Bagsvaerd
(E)国家:丹麦
(F)邮区代码(ZIP):DK-2880
(G)电话:+45 44 44 88 88
(H)传真:+45 44 49 32 56
(ii)发明名称:新的内切葡聚糖酶
(iii)序列数:72
(iv)计算机可读形式:
(A)介质类型:软盘
(B)计算机:IBM-PC兼容机
(C)操作系统:PC-DOS/MS-DOS
(D)软件:Patentln Release#1.0,版本#1.30(EPO)
(2)SEQ ID NO:1A的信息:
(i)序列特征:
(A)长度:891个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:cDNA
(vi)原始来源:
(A)生物体:啤酒糖酵母
(B)菌株:DSM 9770
(xi)序列描述:SEQ ID NO:1A:
AAAGAAAGGC TCTCTGCTGT CGTCGCTCTC GTCGCTCTCG TCGGCATCCT
CCATCCGTCC 60
GCCTTTGATA ACCCGCTCCC CGACTCAGTC AAGACGACGC ATACTTGGCA
CCATGCATCT 120
CTCCGCCACC ACCGGGTTCC TCGCCCTCCC GGTCCTGGCC CTGGACCAGC
TCTCGGGCAT 180
CGGCCAGACG ACCCGGTACT GGGACTGCTC CAAGCCGAGC TGCGCCTGGC
CCGGCAAGGG 240
CCCCTCGTCT CCGGTGCAGG CCTGCGACAA GAACGACAAC CCGCTCAACG
ACGGCGGCTC 300
CACCCGGTCC GGCTGCGACG CGGGCGGCAG CGCCTACATG TGCTCCTCCC
AGAGCCCCTG 360
GGCCGTCAGC GACGAGCTGT CGTACGGCTG GGCGGCCGTC AAGCTCGCCG
GCAGCTCCGA 420
GTCGCAGTGG TGCTGCGCCT GCTACGAGCT GACCTTCACC AGCGGGCCGG
TCGCGGGCAA 480
GAAGATGATT GTGCAGGCGA CCAACACCGG TGGCGACCTG GGCGACAACC
ACTTTGACCT 540
GGCCATCCCC GGTGGCGGTG TCGGTATTTT CAACGCCTGC ACCGACCAGT
ACGGCGCTCC 600
CCCGAACGGC TGGGGCGACC GCTACGGCGG CATCCATTCC AAGGAAGAGT
GCGAATCCTT 660
CCCGGAGGCC CTCAAGCCCG GCTGCAACTG GCGCTTCGAC TGGTTCCAAA
ACGCCGACAA 720
CCCGTCGGTC ACCTTCCAGG AGGTGGCCTG CCCGTCGGAG CTCACGTCCA
AGAGCGGCTG 780
CTCCCGTTAA GAGGGAAGAG AGGGGGCTGG AAGGACCGAA AGATTCAACC
TCTGCTCCTG 840
CTGGGGAAGC TCGGGCGCGA GTGTGAAACT GGTGTAAATA TTGTGGCACA
CACAAGCTAC 900
TACAGTCCGT CTCGCCGTCC GGCTAACTAG CCTTGCTGCG GATCTGTCCA
AAAAAAAAAA 960
(2)SEQ ID NO:1B的信息:
(i)序列特征:
(A)长度:225个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:1B:
Met His Leu Ser Ala Thr Thr Gly Phe Leu Ala Leu Pro Val Leu Ala
1 5 10 15
Leu Asp Gln Leu Ser Gly Ile Gly Gln Thr Thr Arg Tyr Trp Asp Cys
20 25 30
Cys Lys Pro Ser Cys Ala Trp Pro Gly Lys Gly Pro Ser Ser Pro Val
35 40 45
Gln Ala Cys Asp Lys Asn Asp Asn Pro Leu Asn Asp Gly Gly Ser Thr
50 55 60
Arg Ser Gly Cys Asp Ala Gly Gly Ser Ala Tyr Met Cys Ser Ser Gln
65 70 75 80
Ser Pro Trp Ala Val Ser Asp Glu Leu Ser Tyr Gly Trp Ala Ala Val
85 90 95
Lys Leu Ala Gly Ser Ser Glu Ser Gln Trp Cys Cys Ala Cys Tyr Glu
100 105 110
Leu Thr Phe Thr Ser Gly Pro Val Ala Gly Lys Lys Met Ile Val Gln
115 120 125
Ala Thr Asn Thr Gly Gly Asp Leu Gly Asp Asn His Phe Asp Leu Ala
130 135 140
Ile Pro Gly Gly Gly Val Gly Ile Phe Asn Ala Cys Thr Asp Gln Tyr
145 150 155 160
Gly Ala Pro Pro Asn Gly Trp Gly Asp Arg Tyr Gly Gly Ile His Ser
165 170 175
Lys Glu Glu Cys Glu Ser Phe Pro Glu Ala Leu Lys Pro Gly Cys Asn
180 185 190
Trp Arg Phe Asp Trp Phe Gln Asn Ala Asp Asn Pro Ser Val Thr Phe
195 200 205
Gln Glu Val Ala Cys Pro Ser Glu Leu Thr Ser Lys Ser Gly Cys Ser
210 215 220
Arg
225
(2)SEQ ID NO:2A的信息:
(i)序列特征:
(A)长度:894个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:“构建体1”
(xi)序列描述:SEQ ID NO:2A:
ATGCATCTCT CCGCCACCAC CGGGTTCCTC GCCCTCCCGG TCCTGGCCCT GGACCAGCTC
60
TCGGGCATCG GCCAGACGAC CCGGTACTGG GACTGCTGCA AGCCGAGCTG CGCCTGGCCC
120
GGCAAGGGCC CCTCGTCTCC GGTGCAGGCC TGCGACAAGA ACGACAACCC GCTCAACGAC
180
GGCGGCTCCA CCCGGTCCGG CTGCGACGCG GGCGGCAGCG CCTACATGTG CTCCTCCCAG
240
AGCCCCTGGG CCGTCAGCGA CGAGCTGTCG TACGGCTGGG CGGCCGTCAA GCTCGCCGGC
300
AGCTCCGAGT CGCAGTGGTG CTGCGCCTGC TACGAGCTGA CCTTCACCAG CGGGCCGGTC
360
GCGGGCAAGA AGATGATTGT GCAGGCGACC AACACCGGTG GCGACCTGGG CGACAACCAC
420
TTTGACCTGG CCATCCCCGG TGGCGGTGTC GGTATTTTCA ACGCCTGCAC CGACCAGTAC
480
GGCGCTCCCC CGAACGGCTG GGGCGACCGC TACGGCGGCA TCCATTCCAA GGAAGAGTGC
540
GAATCCTTCC CGGAGGCCCT CAAGCCCGGC TGCAACTGGC GCTTCGACTG GTTCCAAAAC
600
GCCGACAACC CGTCGGTCAC CTTCCAGGAG GTGGCCTGCC CGTCGGAGCT CACGTCCAAG
660
AGCGGCTGCT CCCGTCCCTC CAGCAGCACC AGCTCTCCGG TCAACCAGCC TACCAGCACC
720
AGCACCACGT CCACCTCCAC CACCTCGAGC CCGCCAGTCC AGCCTACGAC TCCCAGCGGC
780
TGCACTGCTG AGAGGTGGGC TCAGTGCGGC GGCAATGGCT GGAGCGGCTG CACCACCTGC
840
GTCGCTGGCA GCACTTGCAC GAAGATTAAT GACTGGTACC ATCAGTGCCT GTAG
894
(2)SEQ ID NO:2B的信息:
(i)序列特征:
(A)长度:297个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:2B:
Met His Leu Ser Ala Thr Thr Gly Phe Leu Ala Leu Pro Val Leu Ala
1 5 10 15
Leu Asp Gln Leu Ser Gly Ile Gly Gln Thr Thr Arg Tyr Trp Asp Cys
20 25 30
Cys Lys Pro Ser Cys Ala Trp Pro Gly Lys Gly Pro Ser Ser Pro Val
35 40 45
Gln Ala Cys Asp Lys Asn Asp Asn Pro Leu Asn Asp Gly Gly Ser Thr
50 55 60
Arg Ser Gly Cys Asp Ala Gly Gly Ser Ala Tyr Met Cys Ser Ser Gln
65 70 75 80
Ser Pro Trp Ala Val Ser Asp Glu Leu Ser Tyr Gly Trp Ala Ala Val
85 90 95
Lys Leu Ala Gly Ser Ser Glu Ser Gln Trp Cys Cys Ala Cys Tyr Glu
100 105 110
Leu Thr Phe Thr Ser Gly Pro Val Ala Gly Lys Lys Met Ile Val Gln
115 120 125
Ala Thr Asn Thr Gly Gly Asp Leu Gly Asp Asn His Phe Asp Leu Ala
130 135 140
Ile Pro Gly Gly Gly Val Gly Ile Phe Asn Ala Cys Thr Asp Gln Tyr
145 150 155 160
Gly Ala Pro Pro Asn Gly Trp Gly Asp Arg Tyr Gly Gly Ile His Ser
165 170 175
Lys Glu Glu Cys Glu Ser Phe Pro Glu Ala Leu Lys Pro Gly Cys Asn
180 185 190
Trp Arg Phe Asp Trp Phe Gln Asn Ala Asp Asn Pro Ser Val Thr Phe
195 200 205
Gln Glu Val Ala Cys Pro Ser Glu Leu Thr Ser Lys Ser Gly Cys Ser
210 215 220
Arg Pro Ser Ser Ser Thr Ser Ser Pro Val Asn Gln Pro Thr Ser Thr
225 230 235 240
Ser Thr Thr Ser Thr Ser Thr Thr Ser Ser Pro Pro Val Gln Pro Thr
245 250 255
Thr Pro Ser Gly Cys Thr Ala Glu Arg Trp Ala Gln Cys Gly Gly Asn
260 265 270
Gly Trp Ser Gly Cys Thr Thr Cys Val Ala Gly Ser Thr Cys Thr Lys
275 280 285
Ile Asn Asp Trp Tyr His Gln Cys Leu
290 295
(2)SEQ ID NO:3A的信息:
(i)序列特征:
(A)长度:927个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:“构建体2”
(xi)序列描述:SEQ ID NO:3A:
ATGCATCTCT CCGCCACCAC CGGGTTCCTC GCCCTCCCGG TCCTGGCCCT GGACCAGCTC
60
TCGGGCATCG GCCAGACGAC CCGGTACTGG GACTGCTGCA AGCCGAGCTG CGCCTGGCCC
120
GGCAAGGGCC CCTCGTCTCC GGTGCAGGCC TGCGACAAGA ACGACAACCC GCTCAACGAC
180
GGCGGCTCCA CCCGGTCCGG CTGCGACGCG GGCGGCAGCG CCTACATGTG CTCCTCCCAG
240
AGCCCCTGGG CCGTCAGCGA CGAGCTGTCG TACGGCTGGG CGGCCGTCAA GCTCGCCGGC
300
AGCTCCGAGT CGCAGTGGTG CTGCGCCTGC TACGAGCTGA CCTTCACCAG CGGGCCGGTC
360
GCGGGCAAGA AGATGATTGT GCAGGCGACC AACACCGGTG GCGACCTGGG CGACAACCAC
420
TTTGACCTGG CCATCCCCGG TGGCGGTGTC GGTATTTTCA ACGCCTGCAC CGACCAGTAC
480
GGCGCTCCCC CGAACGGCTG GGGCGACCGC TACGGCGGCA TCCATTCCAA GGAAGAGTGC
540
GAATCCTTCC CGGAGGCCCT CAAGCCCGGC TGCAACTGGC GCTTCGACTG GTTCCAAAAC
600
GCCGACAACC CGTCGGTCAC CTTCCAGGAG GTGGCCTGCC CGTCGGAGCT CACGTCCAAG
660
AGCGGCTGCT CCCGTAACGA CGACGGCAAC TTCCCTGCCG TCCAGATCCC CTCCAGCAGC
720
ACCAGCTCTC CGGTCAACCA GCCTACCAGC ACCAGCACCA CGTCCACCTC CACCACCTCG
780
AGCCCGCCAG TCCAGCCTAC GACTCCCAGC GGCTGCACTG CTGAGAGGTG GGCTCAGTGC
840
GGCGGCAATG GCTGGAGCGG CTGCACCACC TGCGTCGCTG GCAGCACTTG CACGAAGATT
900
AATGACTGGT ACCATCAGTG CCTGTAG
927
(2)SEQ ID NO:3B的信息:
(i)序列特征:
(A)长度:308个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:3B:
Met His Leu Ser Ala Thr Thr Gly Phe Leu Ala Leu Pro Val Leu Ala
1 5 10 15
Leu Asp Gln Leu Ser Gly Ile Gly Gln Thr Thr Arg Tyr Trp Asp Cys
20 25 30
Cys Lys Pro Ser Cys Ala Trp Pro Gly Lys Gly Pro Ser Ser Pro Val
35 40 45
Gln Ala Cys Asp Lys Asn Asp Asn Pro Leu Asn Asp Gly Gly Ser Thr
50 55 60
Arg Ser Gly Cys Asp Ala Gly Gly Ser Ala Tyr Met Cys Ser Ser Gln
65 70 75 80
Ser Pro Trp Ala Val Ser Asp Glu Leu Ser Tyr Gly Trp Ala Ala Val
85 90 95
Lys Leu Ala Gly Ser Ser Glu Ser Gln Trp Cys Cys Ala Cys Tyr Glu
100 105 110
Leu Thr Phe Thr Ser Gly Pro Val Ala Gly Lys Lys Met Ile Val Gln
115 120 125
Ala Thr Asn Thr Gly Gly Asp Leu Gly Asp Asn His Phe Asp Leu Ala
130 135 140
Ile Pro Gly Gly Gly Val Gly Ile Phe Asn Ala Cys Thr Asp Gln Tyr
145 150 155 160
Gly Ala Pro Pro Asn Gly Trp Gly Asp Arg Tyr Gly Gly Ile His Ser
165 170 175
Lys Glu Glu Cys Glu Ser Phe Pro Glu Ala Leu Lys Pro Gly Cys Asn
180 185 190
Trp Arg Phe Asp Trp Phe Gln Asn Ala Asp Asn Pro Ser Val Thr Phe
195 200 205
Gln Glu Val Ala Cys Pro Ser Glu Leu Thr Ser Lys Ser Gly Cys Ser
210 215 220
Arg Asn Asp Asp Gly Asn Phe Pro Ala Val Gln Ile Pro Ser Ser Ser
225 230 235 240
Thr Ser Ser Pro Val Asn Gln Pro Thr Ser Thr Ser Thr Thr Ser Thr
245 250 255
Ser Thr Thr Ser Ser Pro Pro Val Gln Pro Thr Thr Pro Ser Gly Cys
260 265 270
Thr Ala Glu Arg Trp Ala Gln Cys Gly Gly Asn Gly Trp Ser Gly Cys
275 280 285
Thr Thr Cys Val Ala Gly Ser Thr Cys Thr Lys Ile Asn Asp Trp Tyr
290 295 300
His Gln Cys Leu
305
(2)SEQ ID NO:4的信息:
(i)序列特征:
(A)长度:888个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:啤酒糖酵母,DSM 10082
(xi)序列描述:SEQ ID NO:4:
CCAGTGTGCT GGAAAGCCTT CGTGCTGTCC CCGACGTATC CCTGACCGCC ATGCGTTCCA
60
CCAGCATCTT GATCGGCCTT GTTGCCGGCG TCGCTGCTCA GAGCTCTGGC TCTGGCCATA
120
CAACCAGGTA CTGGGACTGC TGCAAGCCCT CATGCGCCTG GGATGAGAAG GCGGCTGTCA
180
GCCGGCCGGT CACAACATGC GACAGGAACA ACAGCCCCCT TTCGCCCGGC GCTGTGAGCG
240
GCTGCGACCC CAACGGCGTT GCATTCACCT GCAACGACAA CCAGCCTTGG GCCGTAAACA
300
ACAATGTCGC CTACGGTTTT GCGGCTACCG CCTTCCCTGG TGGCAATGAG GCGTCGTGGT
360
GCTGTGCCTG CTATGCTCTT CAATTCACAT CCGGCCCCGT TGCTGGCAAG ACGATGGTTG
420
TGCAATCCAC CAACACTGGC GGAGATCTCA GCGGCACTCA CTTCGATATC CAGATGCCCG
480
GTGGAGGTCT CGGCATCTTC GACGGCTGCA CCCCGCAGTT CGGCTTCACG TTCCCCGGCA
540
ACCGCTACGG CGGTACCACG AGCCGCAGCC AGTGCGCCGA GCTGCCCTCC GTCCTCCGTG
600
ACGGCTGCCA CTGGCGTTAC GACTGGTTCA ACGATGCCGA CAACCCCAAC GTCAACTGGC
660
GCCGCGTCCG ATGCCCGGCG GCCCTCACGA ACCGCTCCGG CTGCGTCCGC AACGACGACA
720
ACAGCTACCC CGTCTTCGAG CCCGGCACGG GCACCCCGCC GACCCCCACG ACCACGACTA
780
CCAGCTCCCC TCCTCAGCCC ACCAACGGCG GAGGCGGCGG CACTTCTCCT CACTGGGGCC
840
AGTGCGGCGG CCAGGGCTGG TCTGGCCCGA CGGCCTGTGC CGGTGGGTCG ACCTGCAACC
900
TGATCAACCC GTGGTACTCC CAGTGCATTC CCAACTAAGT GATCCGGGCA TTGCGGTCGA
960
AAGGGGACCG TTAGTCGACA AGGCCCAGCC AGACCTCAGG CAGGTGGCTG CCATGGCAGA
1020
TTGTATATAG TCTTCCGAGT ACATACTATT GAATGAAAAT AAGAGCGGCT CGGACCATGA
1080
GCAGATGCCA TTTGATAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
1140
AAAAAAAAAA AAAA
1154
(2)SEQ ID NO:5的信息:
(i)序列特征:
(A)长度:295个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:5:
Met Arg Ser Thr Ser Ile Leu Ile Gly Leu Val Ala Gly Val Ala Ala
1 5 10 15
Gln Ser Ser Gly Ser Gly His Thr Thr Arg Tyr Trp Asp Cys Cys Lys
20 25 30
Pro Ser Cys Ala Trp Asp Glu Lys Ala Ala Val Ser Arg Pro Val Thr
35 40 45
Thr Cys Asp Arg Asn Asn Ser Pro Leu Ser Pro Gly Ala Val Ser Gly
50 55 60
Cys Asp Pro Asn Gly Val Ala Phe Thr Cys Asn Asp Asn Gln Pro Trp
65 70 75 80
Ala Val Asn Asn Asn Val Ala Tyr Gly Phe Ala Ala Thr Ala Phe Pro
85 90 95
Gly Gly Asn Glu Ala Ser Trp Cys Cys Ala Cys Tyr Ala Leu Gln Phe
100 105 110
Thr Ser Gly Pro Val Ala Gly Lys Thr Met Val Val Gln Ser Thr Asn
115 120 125
Thr Gly Gly Asp Leu Ser Gly Thr His Phe Asp Ile Gln Met Pro Gly
130 135 140
Gly Gly Leu Gly Ile Phe Asp Gly Cys Thr Pro Gln Phe Gly Phe Thr
145 150 155 160
Phe Pro Gly Asn Arg Tyr Gly Gly Thr Thr Ser Arg Ser Gln Cys Ala
165 170 175
Glu Leu Pro Ser Val Leu Arg Asp Gly Cys His Trp Arg Tyr Asp Trp
180 185 190
Phe Asn Asp Ala Asp Asn Pro Asn Val Asn Trp Arg Arg Val Arg Cys
195 200 205
Pro Ala Ala Leu Thr Asn Arg Ser Gly Cys Val Arg Asn Asp Asp Asn
210 215 220
Ser Tyr Pro Val Phe Glu Pro Gly Thr Gly Thr Pro Pro Thr Pro Thr
225 230 235 240
Thr Thr Thr Thr Ser Ser Pro Pro Gln Pro Thr Asn Gly Gly Gly Gly
245 250 255
Gly Thr Ser Pro His Trp Gly Gln Cys Gly Gly Gln Gly Trp Ser Gly
260 265 270
Pro Thr Ala Cys Ala Gly Gly Ser Thr Cys Asn Leu Ile Asn Pro Trp
275 280 285
Tyr Ser Gln Cys Ile Pro Asn
290 295
(2)SEQ ID NO:6的信息:
(i)序列特征:
(A)长度:1423个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:啤酒糖酵母,DSM 10080
(xi)序列描述:SEQ ID NO:6:
AAAGTTCTGG CCGGAACAGA TCTCCGTTGT CGATCTTCGA TTTTCCAGAC TCAGTCTGTG
60
ACACTCCTTC AATCCACATT CCTTTACTTC TTCGTCACTC ATTCACATCA TGATTTCAGC
120
TTGGATTCTC CTGGGGCTGG TAGGCGCCGT GCCCTCCTCC GTCATGGCCG CCTCGGGCAA
180
AGGCCACACC ACCCGCTACT GGGATTGCTG CAAGACTTCT TGCGCATGGG AGGGCAAGGC
240
ATCCGTCTCC GAGCCTGTCC TGACCTGTAA CAAGCAGGAC AACCCCATCG TCGATGCCAA
300
CGCCAGAAGC GGCTGCGACG GCGGCGGGGC ATTTGCCTGT ACCAACAATT CCCCTTGGGC
360
CGTGAGCGAG GACCTGGCCT ACGGATTTGC TGCCACAGCC CTCAGCGGCG GCACTGAGGG
420
CAGCTGGTGC TGCGCGTGTT ACGCCATCAC ATTCACGAGT GGCCCTGTGG CTGGCAAGAA
480
GATGGTCGTC CAGTCCACGA ACACGGGAGG CGACCTGTCC AACAACCACT TTGACCTGAT
540
GATTCCCGGT GGAGGCCTCG GCATCTTTGA CGGTTGCTCG GCTCAGTTCG GACAACTTCT
600
TCCCGGCGAG CGTTACGGAG GTGTTTCGTC CCGCTCTCAA TGCGATGGCA TGCCCGAGCT
660
CTTGAAAGAC GGTTGCCAGT GGCGCTTCGA CTGGTTCAAG AACTCAGACA ACCCTGACAT
720
CGAGTTCGAG CAGGTCCAGT GTCCCAAAGA GCTCATTGCG GTCTCTGGGT GCGTCCGTGA
780
CGACGATAGC AGCTTTCCCG TCTTCCAAGG TTCGGGCTCA GGAGATGTCA ACCCACCTCC
840
CAAGCCGACT ACGACTACGA CCTCGTCAAA GCCGAAAACA ACCTCTGCAC CATCCACTCT
900
CTCGAACCCA TCCGCCCCTC AACAGCCAGG GAACACTGAT AGACCTGCCG AGACAACCAC
960
TACCAAGCTG CCTGCCCTGC CGGCCACGAC GAGCAGCCCT GCTGTCTCAG TTCCTTCGTC
1020
CAGCGCTCGC GTGCCTTTGT GGGGGCAATG CGACTCGGAA GCTTCATGGG ACGCACCTAA
1080
GAAGTGTGCA AAGGGCACCA AGTGTGTCTA CGTCAACGAC TGGTACTCTC AATGCCAGCC
1140
GAAGAACTCT TGTGCTTGAG AAGCAATGCT CACAGCATGT CCTCTTGTCA CCCCTTCTTT
1200
TCATTCCCAA ACATACTTAC TGTATTATTA TTTCCGATGC TTCATTTCTT GCTTGTTTCT
1260
GTCTTTCCTG CACGCAGCTT TCAACGATAC CCTTCATGCG ATTGCCCTAC GATCAGATGA
1320
TGGGCACGAC ATGGAGGATG GTTTGGGCAC TCACGCGTTC AGGACGGGAA AATTTATTAG
1380
GGCTGAGATC CGTGAATTGA CTTCATTTCG GCGGAATGTC TGC
1423
(2)SEQ ID NO:7的信息:
(i)序列特征:
(A)长度:349个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:7:
Met Ile Ser Ala Trp Ile Leu Leu Gly Leu Val Gly Ala Val Pro Ser
1 5 10 15
Ser Val Met Ala Ala Ser Gly Lys Gly His Thr Thr Arg Tyr Trp Asp
20 25 30
Cys Cys Lys Thr Ser Cys Ala Trp Glu Gly Lys Ala Ser Val Ser Glu
35 40 45
Pro Val Leu Thr Cys Asn Lys Gln Asp Asn Pro Ile Val Asp Ala Asn
50 55 60
Ala Arg Ser Gly Cys Asp Gly Gly Gly Ala Phe Ala Cys Thr Asn Asn
65 70 75 80
Ser Pro Trp Ala Val Ser Glu Asp Leu Ala Tyr Gly Phe Ala Ala Thr
85 90 95
Ala Leu Ser Gly Gly Thr Glu Gly Ser Trp Cys Cys Ala Cys Tyr Ala
100 105 110
Ile Thr Phe Thr Ser Gly Pro Val Ala Gly Lys Lys Met Val Val Gln
115 120 125
Ser Thr Asn Thr Gly Gly Asp Leu Ser Asn Asn His Phe Asp Leu Met
130 135 140
Ile Pro Gly Gly Gly Leu Gly Ile Phe Asp Gly Cys Ser Ala Gln Phe
145 150 155 160
Gly Gln Leu Leu Pro Gly Glu Arg Tyr Gly Gly Val Ser Ser Arg Ser
165 170 175
Gln Cys Asp Gly Met Pro Glu Leu Leu Lys Asp Gly Cys Gln Trp Arg
180 185 190
Phe Asp Trp Phe Lys Asn Ser Asp Asn Pro Asp Ile Glu Phe Glu Gln
195 200 205
Val Gln Cys Pro Lys Glu Leu Ile Ala Val Ser Gly Cys Val Arg Asp
210 215 220
Asp Asp Ser Ser Phe Pro Val Phe Gln Gly Ser Gly Ser Gly Asp Val
225 230 235 240
Asn Pro Pro Pro Lys Pro Thr Thr Thr Thr Thr Ser Ser Lys Pro Lys
245 250 255
Thr Thr Ser Ala Pro Ser Thr Leu Ser Asn Pro Ser Ala Pro Gln Gln
260 265 270
Pro Gly Asn Thr Asp Arg Pro Ala Glu Thr Thr Thr Thr Lys Leu Pro
275 280 285
Ala Leu Pro Ala Thr Thr Ser Ser Pro Ala Val Ser Val Pro Ser Ser
290 295 300
Ser Ala Arg Val Pro Leu Trp Gly Gln Cys Asp Ser Glu Ala Ser Trp
305 310 315 320
Asp Ala Pro Lys Lys Cys Ala Lys Gly Thr Lys Cys Val Tyr Val Asn
325 330 335
Asp Trp Tyr Ser Gln Cys Gln Pro Lys Asn Ser Cys Ala
340 345
(2)SEQ ID NO:8的信息:
(i)序列特征:
(A)长度:1174个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:啤酒糖酵母,DSM 10081
(xi)序列描述:SEQ ID NO:8:
GAGCAGCACC CCTCAAGCTG TACAGTTTCC ACCCCGCTCT CTTTTCTTCG GCCCCCAGGA
60
TGCGCTCTAC TCCCGTTCTT CGCACAACCC TGGCCGCTGC ACTTCCTCTG GTCGCCTCCG
120
CGGCCAGTGG CAGTGGCCAG TCCACGAGAT ACTGGGACTG CTGCAAGCCG TCGTGCGCTT
180
GGCCCGGGAA GGCCGCCGTC AGCCAACCGG TCTACGCGTG CGATGCCAAC TTCCAGCGCC
240
TGTCCGACTT CAATGTCCAG TCGGGCTGCA ACGGCGGCTC GGCCTACTCC TGCGCCGACC
300
AGACTCCCTG GGCGGTGAAC GACAATCTCG CCTACGGCTT CGCCGCGACG AGCATCGCCG
360
GCGGGTCCGA ATCCTCGTGG TGCTGCGCCT GCTACGCGCT CACCTTCACT TCCGGTCCCG
420
TCGCCGGCAA GACAATGGTG GTGCAGTCAA CGAGCACTGG CGGCGACCTG GGAAGTAACC
480
AGTTCGATAT CGCCATGCCC GGCGGCGGCG TGGGCATCTT CAACGGCTGC AGCTCGCAGT
540
TCGGCGGCCT CCCCGGCGCT CAATACGGCG GCATTTCGTC GCGCGACCAG TGCGATTCCT
600
TCCCCGCGCC GCTCAAGCCC GGCTGCCAGT GGCGGTTTGA CTGGTTCCAG AACGCCGACA
660
ACCCGACGTT CACGTTCCAG CAGGTGCAGT GCCCCGCCGA GATCGTTGCC CGCTCCGGCT
720
GCAAGCGCAA CGACGACTCC AGCTTCCCCG TCTTCACCCC CCCAAGCGGT GGCAACGGTG
780
GCACCGGGAC GCCCACGTCG ACTGCGCCTG GGTCGGGCCA GACGTCTCCC GGCGGCGGCA
840
GTGGCTGCAC GTCTCAGAAG TGGGCTCAGT GCGGTGGCAT CGGCTTCAGC GGATGCACCA
900
CCTGTGTCTC TGGCACCACC TGCCAGAAGT TGAACGACTA CTACTCGCAG TGCCTCTAAA
960
CAGCTTTTCG CACGAGGTGG CGGGACGGAG CAAGGAGACC GTCAACTTCG TCATGCATAT
1020
TTTTTGAGCG CTCAATACAT ACATAACCTT CGATTCTTGT ACATAGCACG CCGGTACACA
1080
TCTCACACCG ACTTTGGGGG CGGAATCAGG CCCGTTTTAA AAAAAAAAAA AAAAAAAAAA
1140
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAA
1174
(2)SEQ ID NO:9的信息:
(i)序列特征:
(A)长度:299个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:9:
Met Arg Ser Thr Pro Val Leu Arg Thr Thr Leu Ala Ala Ala Leu Pro
1 5 10 15
Leu Val Ala Ser Ala Ala Ser Gly Ser Gly Gln Ser Thr Arg Tyr Trp
20 25 30
Asp Cys Cys Lys Pro Ser Cys Ala Trp Pro Gly Lys Ala Ala Val Ser
35 40 45
Gln Pro Val Tyr Ala Cys Asp Ala Asn Phe Gln Arg Leu Ser Asp Phe
50 55 60
Asn Val Gln Ser Gly Cys Asn Gly Gly Ser Ala Tyr Ser Cys Ala Asp
65 70 75 80
Gln Thr Pro Trp Ala Val Asn Asp Asn Leu Ala Tyr Gly Phe Ala Ala
85 90 95
Thr Ser Ile Ala Gly Gly Ser Glu Ser Ser Trp Cys Cys Ala Cys Tyr
100 105 110
Ala Leu Thr Phe Thr Ser Gly Pro Val Ala Gly Lys Thr Met Val Val
115 120 125
Gln Ser Thr Ser Thr Gly Gly Asp Leu Gly Ser Asn Gln Phe Asp Ile
130 135 140
Ala Met Pro Gly Gly Gly Val Gly Ile Phe Asn Gly Cys Ser Ser Gln
145 150 155 160
Phe Gly Gly Leu Pro Gly Ala Gln Tyr Gly Gly Ile Ser Ser Arg Asp
165 170 175
Gln Cys Asp Ser Phe Pro Ala Pro Leu Lys Pro Gly Cys Gln Trp Arg
180 185 190
Phe Asp Trp Phe Gln Asn Ala Asp Asn Pro Thr Phe Thr Phe Gln Gln
195 200 205
Val Gln Cys Pro Ala Glu Ile Val Ala Arg Ser Gly Cys Lys Arg Asn
210 215 220
Asp Asp Ser Ser Phe Pro Val Phe Thr Pro Pro Ser Gly Gly Asn Gly
225 230 235 240
Gly Thr Gly Thr Pro Thr Ser Thr Ala Pro Gly Ser Gly Gln Thr Ser
245 250 255
Pro Gly Gly Gly Ser Gly Cys Thr Ser Gln Lys Trp Ala Gln Cys Gly
260 265 270
Gly Ile Gly Phe Ser Gly Cys Thr Thr Cys Val Ser Gly Thr Thr Cys
275 280 285
Gln Lys Leu Asn Asp Tyr Tyr Ser Gln Cys Leu
290 295
(2)SEQ ID NO:10的信息:
(i)序列特征:
(A)长度:913个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:大肠杆菌,DSM 10512
(xi)序列描述:SEQ ID NO:10:
GCACTATTCT CAGCTCCATT CTCCCTTGAA GTAATTCACC ATGTTCTCTC CGCTCTGGGC
60
CCTGTCGGCT CTGCTCCTAT TTCCTGCCAC TGAAGCCACT AGCGGCGTGA CAACCAGGTA
120
CTGGGACTGC TGCAAGCCGT CTTGTGCTTG GACGGGCAAA GCATCCGTCT CCAAGCCCGT
180
CGGAACCTGC GACATCAACG ACAACGCCCA GACGCCGAGC GATCTGCTCA AGTCGTCCTG
240
TGATGGCGGC AGCGCCTACT ACTGCAGCAA CCAGGGCCCA TGGGCCGTGA ACGACAGCCT
300
TTCCTACGGC TTCGCTGCCG CCAAGCTGTC CGGAAAGCAG GAGACTGATT GGTGCTGTGG
360
CTGCTACAAG CTCACATTCA CCTCCACCGC CGTTTCCGGC AAGCAAATGA TCGTGCAAAT
420
CACGAACACG GGCGGCGACC TCGGCAACAA CCACTTCGAC ATCGCCATGC CGGGCGGCGG
480
CGTCGGCATC TTCAACGGGT GCTCCAAGCA ATGGAACGGC ATCAATCTGG GCAACCAGTA
540
TGGCGGCTTC ACTGACCGCT CGCAATGTGC GACGCTCCCG TCCAAGTGGC AGGCCAGCTG
600
CAACTGGCGC TTCGACTGGT TCGAGAATGC CGACAACCCC ACCGTCGATT GGGAGCCTGT
660
CACTTGCCCA CAGGAATTGG TCGCCCGGAC TGGCTGTTCC CGTACCTAAG TGGGGGTGGA
720
ACCTCCATGT GAATTGGTGT ATATAGCTCC TGCCTGAGCA TCCACCAGTT CGCATGTGTT
780
GATCAGGAGT TGTGTTGCCT TGCTAGGAAA GACTTTGTTG GAAACTTGCG TGTTTATTCC
840
AATTGAATAA CCCTGTATAG ACCGGTCACA TTTTTCTCTG AAAAAAAAAA AAAAAAAAAA
900
AAAAAAAAAA AAA
913
(2)SEQ ID NO:11的信息:
(i)序列特征:
(A)长度:222个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:11:
Met Phe Ser Pro Leu Trp Ala Leu Ser Ala Leu Leu Leu Phe Pro Ala
1 5 10 15
Thr Glu Ala Thr Ser Gly Val Thr Thr Arg Tyr Trp Asp Cys Cys Lys
20 25 30
Pro Ser Cys Ala Trp Thr Gly Lys Ala Ser Val Ser Lys Pro Val Gly
35 40 45
Thr Cys Asp Ile Asn Asp Asn Ala Gln Thr Pro Ser Asp Leu Leu Lys
50 55 60
Ser Ser Cys Asp Gly Gly Ser Ala Tyr Tyr Cys Ser Asn Gln Gly Pro
65 70 75 80
Trp Ala Val Asn Asp Ser Leu Ser Tyr Gly Phe Ala Ala Ala Lys Leu
85 90 95
Ser Gly Lys Gln Glu Thr Asp Trp Cys Cys Gly Cys Tyr Lys Leu Thr
100 105 110
Phe Thr Ser Thr Ala Val Ser Gly Lys Gln Met Ile Val Gln Ile Thr
115 120 125
Asn Thr Gly Gly Asp Leu Gly Asn Asn His Phe Asp Ile Ala Met Pro
130 135 140
Gly Gly Gly Val Gly Ile Phe Asn Gly Cys Ser Lys Gln Trp Asn Gly
145 150 155 160
Ile Asn Leu Gly Asn Gln Tyr Gly Gly Phe Thr Asp Arg Ser Gln Cys
165 170 175
Ala Thr Leu Pro Ser Lys Trp Gln Ala Ser Cys Asn Trp Arg Phe Asp
180 185 190
Trp Phe Glu Asn Ala Asp Asn Pro Thr Val Asp Trp Glu Pro Val Thr
195 200 205
Cys Pro Gln Glu Leu Val Ala Arg Thr Gly Cys Ser Arg Thr
210 215 220
(2)SEQ ID NO:12的信息:
(i)序列特征:
(A)长度:808个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:大肠杆菌,DSM 10511
(xi)序列描述:SEQ ID NO:12:
CCGCTGCTGG GTATATAATG CTCAGACTTG GAACCAATGG TCCATCCAAA CATGCTTAAA
60
ACGCTCGCTC CATTGATCAT CTTGGCCGCC TCGGTCACAG CGCAAACAGC AGGAGTTACG
120
ACCCGCTACT GGGACTGCTG CAAGCCAAGC TGTGGATGGA GTGGAAAGGC TTCTGTTTCT
180
GCTCCAGTCA GAACTTGCGA TCGTAATGGA AATACACTTG GCCCAGACGT GAAAAGCGGA
240
TGTGATAGCG GTGGAACGTC ATTCACTTGC GCGAACAATG GTCCATTTGC GATTGACAAT
300
AACACTGCAT ATGGTTTTGC TGCAGCCCAC TTAGCGGGCT CTAGCGAAGC AGCCTGGTGT
360
TGCCAGTGCT ACGAATTGAC GTTTACGAGT GGACCCGTAG TTGGGAAGAA ACTGACCGTT
420
CAAGTCACAA ACACGGGAGG TGACCTCGGA AATAATCACT TTGACCTGAT GATCCCCGGT
480
GGAGGTGTTG GCCTCTTCAC ACAAGGATGT CCTGCTCAGT TTGGGAGCTG GAACGGGGGT
540
GCTCAATACG GGGGTGTGTC CAGCCGTGAC CAATGCTCCC AACTTCCAGC AGCTGTGCAA
600
GCTGGATGTC AATTCCGTTT CGACTGGATG GGTGGCGCGG ATAACCCCAA CGTCACCTTC
660
CGACCTGTGA CCTGCCCAGC GCAGCTCACT AATATCTCGG GCTGTGTTCG TAAATGATTC
720
ACGAATATGT AGTGTCGAAT ATGTACATGT GTATGTACTA TAGCTTCAAA GATGGAGGGT
780
CTGTTTAAAA AAAAAAAAAA AAAAAAAA
808
(2)SEQ ID NO:13的信息:
(i)序列特征:
(A)长度:226个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:13:
Met Val His Pro Asn Met Leu Lys Thr Leu Ala Pro Leu Ile Ile Leu
1 5 10 15
Ala Ala Ser Val Thr Ala Gln Thr Ala Gly Val Thr Thr Arg Tyr Trp
20 25 30
Asp Cys Cys Lys Pro Ser Cys Gly Trp Ser Gly Lys Ala Ser Val Ser
35 40 45
Ala Pro Val Arg Thr Cys Asp Arg Asn Gly Asn Thr Leu Gly Pro Asp
50 55 60
Val Lys Ser Gly Cys Asp Ser Gly Gly Thr Ser Phe Thr Cys Ala Asn
65 70 75 80
Asn Gly Pro Phe Ala Ile Asp Asn Asn Thr Ala Tyr Gly Phe Ala Ala
85 90 95
Ala His Leu Ala Gly Ser Ser Glu Ala Ala Trp Cys Cys Gln Cys Tyr
100 105 110
Glu Leu Thr Phe Thr Ser Gly Pro Val Val Gly Lys Lys Leu Thr Val
115 120 125
Gln Val Thr Asn Thr Gly Gly Asp Leu Gly Asn Asn His Phe Asp Leu
130 135 140
Met Ile Pro Gly Gly Gly Val Gly Leu Phe Thr Gln Gly Cys Pro Ala
145 150 155 160
Gln Phe Gly Ser Trp Asn Gly Gly Ala Gln Tyr Gly Gly Val Ser Ser
165 170 175
Arg Asp Gln Cys Ser Gln Leu Pro Ala Ala Val Gln Ala Gly Cys Gln
180 185 190
Phe Arg Phe Asp Trp Met Gly Gly Ala Asp Asn Pro Asn Val Thr Phe
195 200 205
Arg Pro Val Thr Cys Pro Ala Gln Leu Thr Asn Ile Ser Gly Cys Val
210 215 220
Arg Lys
225
(2)SEQ ID NO:14-A的信息:
(i)序列特征:
(A)长度:1048个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(xi)序列描述:SEQ ID NO:14-A:
GACTTGGAAC CAATGGTCCA TCCAAACATG CTTAAAACGC TCGCTCCATT GATCATCTTG
60
GCCGCCTCGG TCACAGCGCA AACAGCAGGA GTTACGACCC GCTACTGGGA CTGCTGCAAG
120
CCAAGCTGTG GATGGAGTGG AAAGGCTTCT GTTTCTGCTC CAGTCAGAAC TTGCGATCGT
180
AATGGAAATA CACTTGGCCC AGACGTGAAA AGCGGATGTG ATAGCGGTGG AACGTCATTC
240
ACTTGCGCGA ACAATGGTCC ATTTGCGATT GACAATAACA CTGCATATGG TTTTGCTGCA
300
GCCCACTTAG CGGGCTCTAG CGAAGCAGCC TGGTGTTGCC AGTGCTACGA ATTGACGTTT
360
ACGAGTGGAC CCGTAGTTGG GAAGAAACTG ACCGTTCAAG TCACAAACAC GGGAGGTGAC
420
CTCGGAAATA ATCACTTTGA CCTGATGATC CCCGGTGGAG GTGTTGGCCT CTTCACACAA
480
GGATGTCCTG CTCAGTTTGG GAGCTGGAAC GGGGGTGCTC AATACGGGGG TGTGTCCAGC
540
CGTGACCAAT GCTCCCAACT TCCAGCAGCT GTGCAAGCTG GATGTCAATT CCGTTTCGAC
600
TGGATGGGTG GCGCGGATAA CCCCAACGTC ACCTTCCGAC CTGTGACCTG CCCAGCGCAG
660
CTCACTAATA TCTCGGGCTG TGTTCGTAAA CCCTCCAGCA GCACCAGCTC TCCGGTCAAC
720
CAGCCTACCA GCACCAGCAC CACGTCCACC TCCACCACCT CGAGCCCGCC AGTCCAGCCT
780
ACGACTCCCA GCGGCTGCAC TGCTGAGAGG TGGGCTCAGT GCGGCGGCAA TGGCTGGAGC
840
GGCTGCACCA CCTGCGTCGC TGGCAGCACT TGCACGAAGA TTAATGACTG GTACCATCAG
900
TGCCTGTAGA CGCAGGGCAG CTTGAGGGCC TTACTGGTGG CGCAACGAAA TGACACTCCC
960
AATCACTGTA TTAGTTCTTG TACATAATTT CGTCATCCCT CCAGGGATTG TCACATAAAT
1020
GCAATGAGGA ACAATGAGTA CAGAATTC
1048
(2)SEQ ID NO:14-B的信息:
(i)序列特征:
(A)长度:298个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:14-B:
Met Val His Pro Asn Met Leu Lys Thr Leu Ala Pro Leu Ile Ile Leu
1 5 10 15
Ala Ala Ser Val Thr Ala Gln Thr Ala Gly Val Thr Thr Arg Tyr Trp
20 25 30
Asp Cys Cys Lys Pro Ser Cys Gly Trp Ser Gly Lys Ala Ser Val Ser
35 40 45
Ala Pro Val Arg Thr Cys Asp Arg Asn Gly Asn Thr Leu Gly Pro Asp
50 55 60
Val Lys Ser Gly Cys Asp Ser Gly Gly Thr Ser Phe Thr Cys Ala Asn
65 70 75 80
Asn Gly Pro Phe Ala Ile Asp Asn Asn Thr Ala Tyr Gly Phe Ala Ala
85 90 95
Ala His Leu Ala Gly Ser Ser Glu Ala Ala Trp Cys Cys Gln Cys Tyr
100 105 110
Glu Leu Thr Phe Thr Ser Gly Pro Val Val Gly Lys Lys Leu Thr Val
115 120 125
Gln Val Thr Asn Thr Gly Gly Asp Leu Gly Asn Asn His Phe Asp Leu
130 135 140
Met Ile Pro Gly Gly Gly Val Gly Leu Phe Thr Gln Gly Cys Pro Ala
145 150 155 160
Gln Phe Gly Ser Trp Asn Gly Gly Ala Gln Tyr Gly Gly Val Ser Ser
165 170 175
Arg Asp Gln Cys Ser Gln Leu Pro Ala Ala Val Gln Ala Gly Cys Gln
180 185 190
Phe Arg Phe Asp Trp Met Gly Gly Ala Asp Asn Pro Asn Val Thr Phe
195 200 205
Arg Pro Val Thr Cys Pro Ala Gln Leu Thr Asn Ile Ser Gly Cys Val
210 215 220
Arg Lys Pro Ser Ser Ser Thr Ser Ser Pro Val Asn Gln Pro Thr Ser
225 230 235 240
Thr Ser Thr Thr Ser Thr Ser Thr Thr Ser Ser Pro Pro Val Gln Pro
245 250 255
Thr Thr Pro Ser Gly Cys Thr Ala Glu Arg Trp Ala Gln Cys Gly Gly
260 265 270
Asn Gly Trp Ser Gly Cys Thr Thr Cys Val Ala Gly Ser Thr Cys Thr
275 280 285
Lys Ile Asn Asp Trp Tyr His Gln Cys Leu
290 295
(2)SEQ ID NO:15-A的信息:
(i)序列特征:
(A)长度:1031个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(xi)序列描述:SEQ ID NO:15-A:
CCATCCAAAC ATGCTTAAAA CGCTCGCTCC ATTGATCATC TTGGCCGCCT CGGTCACAGC
60
GCAAACAGCA GGAGTTACGA CCCGCTACTG GGACTGCTGC AAGCCAAGCT GTGGATGGAG
120
TGGAAAGGCT TCTGTTTCTG CTCCAGTCAG AACTTGCGAT CGTAATGGAA ATACACTTGG
180
CCCAGACGTG AAAAGCGGAT GTGATAGCGG TGGAACGTCA TTCACTTGCG CGAACAATGG
240
TCCATTTGCG ATTGACAATA ACACTGCATA TGGTTTTGCT GCAGCCCACT TAGCGGGCTC
300
TAGCGAAGCA GCCTGGTGTT GCCAGTGCTA CGAATTGACG TTTACGAGTG GACCCGTAGT
360
TGGGAAGAAA CTGACCGTTC AAGTCACAAA CACGGGAGGT GACCTCGGAA ATAATCACTT
420
TGACCTGATG ATCCCCGGTG GAGGTGTTGG CCTCTTCACA CAAGGATGTC CTGCTCAGTT
480
TGGGAGCTGG AACGGGGGTG CTCAATACGG GGGTGTGTCC AGCCGTGACC AATGCTCCCA
540
ACTTCCAGCA GCTGTGCAAG CTGGATGTCA ATTCCGTTTC GACTGGATGG GTGGCGCGGA
600
TAACCCCAAC GTCACCTTCC GACCTGTGAC CTGCCCAGCG CAGCTCACTA ATATCTCGGG
660
CTGTGTTCGT AAACCCTCCA GCAGCACCAG CTCTCCGGTC AACCAGCCTA CCAGCACCAG
720
CACCACGTCC ACCTCCACCA CCTCGAGCCC GCCAGTCCAG CCTACGACTC CCAGCGGCTG
780
CACTGCTGAG AGGTGGGCTC AGTGCGGCGG CAATGGCTGG AGCGGCTGCA CCACCTGCGT
840
CGCTGGCAGC ACTTGCACGA AGATTAATGA CTGGTACCAT CAGTGCCTGT AGACGCAGGG
900
CAGCTTGAGG GCCTTACTGG TGGCGCAACG AAATGACACT CCCAATCACT GTATTAGTTC
960
TTGTACATAA TTTCGTCATC CCTCCAGGGA TTGTCACATA AATGCAATGA GGAACAATGA
1020
GTACAGAATT C
1031
(2)SEQ ID NO:15-B的信息:
(i)序列特征:
(A)长度:293个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:15-B:
Met Leu Lys Thr Leu Ala Pro Leu Ile Ile Leu Ala Ala Ser Val Thr
1 5 10 15
Ala Gln Thr Ala Gly Val Thr Thr Arg Tyr Trp Asp Cys Cys Lys Pro
20 25 30
Ser Cys Gly Trp Ser Gly Lys Ala Ser Val Ser Ala Pro Val Arg Thr
35 40 45
Cys Asp Arg Asn Gly Asn Thr Leu Gly Pro Asp Val Lys Ser Gly Cys
50 55 60
Asp Ser Gly Gly Thr Ser Phe Thr Cys Ala Asn Asn Gly Pro Phe Ala
65 70 75 80
Ile Asp Asn Asn Thr Ala Tyr Gly Phe Ala Ala Ala His Leu Ala Gly
85 90 95
Ser Ser Glu Ala Ala Trp Cys Cys Gln Cys Tyr Glu Leu Thr Phe Thr
100 105 110
Ser Gly Pro Val Val Gly Lys Lys Leu Thr Val Gln Val Thr Asn Thr
115 120 125
Gly Gly Asp Leu Gly Asn Asn His Phe Asp Leu Met Ile Pro Gly Gly
130 135 140
Gly Val Gly Leu Phe Thr Gln Gly Cys Pro Ala Gln Phe Gly Ser Trp
145 150 155 160
Asn Gly Gly Ala Gln Tyr Gly Gly Val Ser Ser Arg Asp Gln Cys Ser
165 170 175
Gln Leu Pro Ala Ala Val Gln Ala Gly Cys Gln Phe Arg Phe Asp Trp
180 185 190
Met Gly Gly Ala Asp Asn Pro Asn Val Thr Phe Arg Pro Val Thr Cys
195 200 205
Pro Ala Gln Leu Thr Asn Ile Ser Gly Cys Val Arg Lys Pro Ser Ser
210 215 220
Ser Thr Ser Ser Pro Val Asn Gln Pro Thr Ser Thr Ser Thr Thr Ser
225 230 235 240
Thr Ser Thr Thr Ser Ser Pro Pro Val Gln Pro Thr Thr Pro Ser Gly
245 250 255
Cys Thr Ala Glu Arg Trp Ala Gln Cys Gly Gly Asn Gly Trp Ser Gly
260 265 270
Cys Thr Thr Cys Val Ala Gly Ser Thr Cys Thr Lys Ile Asn Asp Trp
275 280 285
Tyr His Gln Cys Leu
290
(2)SEQ ID NO:16的信息:
(i)序列特征:
(A)长度:1132个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:大肠杆菌,DSM 10571
(xi)序列描述:SEQ ID NO:16:
CAACAGTTCA AACACCTACA AGGTCCCGTG CCCTGTAGAC CATGCGTTCC TCTGCAGTCC
60
TCATCGGCCT CGTGGCCGGT GTGGCCGCCC AGTCCTCTGG CACCGGCCGC ACCACCAGAT
120
ACTGGGACTG CTGCAAGCCG TCCTGCGGGT GGGACGAAAA GGCCTCCGTC AGCCAGCCCG
180
TCAAGACGTG CGATAGGAAC AACAACCCTC TCGCGTCCAC GGCCAGGAGC GGCTGCGATT
240
CCAACGGCGT CGCCTACACG TGCAACGATA ACCAGCCGTG GGCTGTCAAC GATAACCTGG
300
CCTATGGTTT TGCTGCCACG GCTTTCAGTG GTGGATCGGA GGCCAGCTGG TGCTGTGCCT
360
GCTATGCCCT TCAGTTCACC TCCGGCCCTG TTGCGGGAAA GACCATGGTC GTCCAGTCGA
420
CAAACACCGG CGGCGACCTC AGCGGCAACC ACTTTGACAT CCTCATGCCC GGCGGCGGCC
480
TGGGCATCTT CGACGGCTGC ACCCCGCAAT GGGGCGTCAG CTTCCCCGGA AACCGCTACG
540
GCGGCACCAC CAGCCGCAGC CAGTGCTCCC AAATCCCCTC GGCCCTGCAG CCCGGCTGCA
600
ACTGGCGGTA CGACTGGTTC AACGACGCCG ACAACCCCGA CGTCTCGTGG CGCCGCGTCC
660
AGTGCCCCGC CGCACTCACC GACCGCACCG GCTGCCGCCG CTCCGATGAC GGGAACTATC
720
CCGTCTTCCA GCCCGGTCCG CCCCCGGCCA CGACGATCAG GACATCGACT ACCATCACAG
780
CCTCATCGTC GTCTTCGTCT TCGTCGTCGT CGACTACGGC TGGTAGCCCG CCTGTGCCGA
840
CTGGTGGTGG TAGTGGGCCA ACGTCGCCTG TCTGGGGACA GTGCGGCGGT CAGGGATGGA
900
GTGGTCCTAC GCGTTGTGTT GCTGGGTCGA CATGCAGTGT GGTCAACCCG TGGTACTCGC
960
AGTGTTTTCC TTAAGGAGCC TCTGGCTGAG CAGATCCTTT CGAAGAGGAG GGTCTCTCTG
1020
CTCTTTCAGT CTGTTCAGGG AACGGCCGTC TCGGCTACAT TGTACATATC CCACCTCGTA
1080
TATAGCTAGC TCATCTACAC TTGTGATCTC CAAAAAAAAA AAAAAAAAAA AA
1132
(2)SEQ ID NO:17的信息:
(i)序列特征:
(A)长度:310个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:17:
Met Arg Ser Ser Ala Val Leu Ile Gly Leu Val Ala Gly Val Ala Ala
1 5 10 15
Gln Ser Ser Gly Thr Gly Arg Thr Thr Arg Tyr Trp Asp Cys Cys Lys
20 25 30
Pro Ser Cys Gly Trp Asp Glu Lys Ala Ser Val Ser Gln Pro Val Lys
35 40 45
Thr Cys Asp Arg Asn Asn Asn Pro Leu Ala Ser Thr Ala Arg Ser Gly
50 55 60
Cys Asp Ser Asn Gly Val Ala Tyr Thr Cys Asn Asp Asn Gln Pro Trp
65 70 75 80
Ala Val Asn Asp Asn Leu Ala Tyr Gly Phe Ala Ala Thr Ala Phe Ser
85 90 95
Gly Gly Ser Glu Ala Ser Trp Cys Cys Ala Cys Tyr Ala Leu Gln Phe
100 105 110
Thr Ser Gly Pro Val Ala Gly Lys Thr Met Val Val Gln Ser Thr Asn
115 120 125
Thr Gly Gly Asp Leu Ser Gly Asn His Phe Asp Ile Leu Met Pro Gly
130 135 140
Gly Gly Leu Gly Ile Phe Asp Gly Cys Thr Pro Gln Trp Gly Val Ser
145 150 155 160
Phe Pro Gly Asn Arg Tyr Gly Gly Thr Thr Ser Arg Ser Gln Cys Ser
165 170 175
Gln Ile Pro Ser Ala Leu Gln Pro Gly Cys Asn Trp Arg Tyr Asp Trp
180 185 190
Phe Asn Asp Ala Asp Asn Pro Asp Val Ser Trp Arg Arg Val Gln Cys
195 200 205
Pro Ala Ala Leu Thr Asp Arg Thr Gly Cys Arg Arg Ser Asp Asp Gly
210 215 220
Asn Tyr Pro Val Phe Gln Pro Gly Pro Pro Pro Ala Thr Thr Ile Arg
225 230 235 240
Thr Ser Thr Thr Ile Thr Ala Ser Ser Ser Ser Ser Ser Ser Ser Ser
245 250 255
Ser Thr Thr Ala Gly Ser Pro Pro Val Pro Thr Gly Gly Gly Ser Gly
260 265 270
Pro Thr Ser Pro Val Trp Gly Gln Cys Gly Gly Gln Gly Trp Ser Gly
275 280 285
Pro Thr Arg Cys Val Ala Gly Ser Thr Cys Ser Val Val Asn Pro Trp
290 295 300
Tyr Ser Gln Cys Phe Pro
305 310
(2)SEQ ID NO:18-A的信息:
(i)序列特征:
(A)长度:885个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:来源于壳球孢属的构建体
(xi)序列描述:SEQ ID NO:18-A:
ATG TTC TCT CCG CTC TGG GCC CTG TCG GCT CTG CTC CTA TTT CCT GCC
48
Met Phe Ser Pro Leu Trp Ala Leu Ser Ala Leu Leu Leu Phe Pro Ala
145 150 155
ACT GAA GCC ACT AGC GGC GTG ACA ACC AGG TAC TGG GAC TGC TGC AAG
96
Thr Glu Ala Thr Ser Gly Val Thr Thr Arg Tyr Trp Asp Cys Cys Lys
160 165 170
CCG TCT TGT GCT TGG ACG GGC AAA GCA TCC GTC TCC AAG CCC GTC GGA
144
Pro Ser Cys Ala Trp Thr Gly Lys Ala Ser Val Ser Lys Pro Val Gly
175 180 185
ACC TGC GAC ATC AAC GAC AAC GCC CAG ACG CCG AGC GAT CTG CTC AAG
192
Thr Cys Asp Ile Asn Asp Asn Ala Gln Thr Pro Ser Asp Leu Leu Lys
190 195 200 205
TCG TCC TGT GAT GGC GGC AGC GCC TAC TAC TGC AGC AAC CAG GGC CCA
240
Ser Ser Cys Asp Gly Gly Ser Ala Tyr Tyr Cys Ser Asn Gln Gly Pro
210 215 220
TGG GCC GTG AAC GAC AGC CTT TCC TAC GGC TTC GCT GCC GCC AAG CTG
288
Trp Ala Val Asn Asp Ser Leu Ser Tyr Gly Phe Ala Ala Ala Lys Leu
225 230 235
TCC GGA AAG CAG GAG ACT GAT TGG TGC TGT GGC TGC TAC AAG CTC ACA
336
Ser Gly Lys Gln Glu Thr Asp Trp Cys Cys Gly Cys Tyr Lys Leu Thr
240 245 250
TTC ACC TCC ACC GCC GTT TCC GGC AAG CAA ATG ATC GTG CAA ATC ACG
384
Phe Thr Ser Thr Ala Val Ser Gly Lys Gln Met Ile Val Gln Ile Thr
255 260 265
AAC ACG GGC GGC GAC CTC GGC AAC AAC CAC TTC GAC ATC GCC ATG CCG
432
Asn Thr Gly Gly Asp Leu Gly Asn Asn His Phe Asp Ile Ala Met Pro
270 275 280 285
GGC GGC GGC GTC GGC ATC TTC AAC GGG TGC TCC AAG CAA TGG AAC GGC
480
Gly Gly Gly Val Gly Ile Phe Asn Gly Cys Ser Lys Gln Trp Asn Gly
290 295 300
ATC AAT CTG GGC AAC CAG TAT GGC GGC TTC ACT GAC CGC TCG CAA TGT
528
Ile Asn Leu Gly Asn Gln Tyr Gly Gly Phe Thr Asp Arg Ser Gln Cys
305 310 315
GCG ACG CTC CCG TCC AAG TGG CAG GCC AGC TGC AAC TGG CGC TTC GAC
576
Ala Thr Leu Pro Ser Lys Trp Gln Ala Ser Cys Asn Trp Arg Phe Asp
320 325 330
TGG TTC GAG AAT GCC GAC AAC CCC ACC GTC GAT TGG GAG CCT GTCACT
624
Trp Phe Glu Asn Ala Asp Asn Pro Thr Val Asp Trp Glu Pro Val Thr
335 340 345
TGC CCA CAG GAA TTG GTC GCC CGG ACT GGC TGT TCC CGT ACC CCC TCC
672
Cys Pro Gln Glu Leu Val Ala Arg Thr Gly Cys Ser Arg Thr Pro Ser
350 355 360 365
AGC AGC ACC AGC TCT CCG GTC AAC CAG CCT ACC AGC ACC AGC ACC ACG
720
Ser Ser Thr Ser Ser Pro Val Asn Gln Pro Thr Ser Thr Ser Thr Thr
370 375 380
TCC ACC TCC ACC ACC TCG AGC CCG CCA GTC CAG CCT ACG ACT CCC AGC
768
Ser Thr Ser Thr Thr Ser Ser Pro Pro Val Gln Pro Thr Thr Pro Ser
385 390 395
GGC TGC ACT GCT GAG AGG TGG GCT CAG TGC GGC GGC AAT GGC TGG AGC
816
Gly Cys Thr Ala Glu Arg Trp Ala Gln Cys Gly Gly Asn Gly Trp Ser
400 405 410
GGC TGC ACC ACC TGC GTC GCT GGC AGC ACT TGC ACG AAG AT TAAT GAC
864
Gly Cys Thr Thr Cys Val Ala Gly Ser Thr Cys Thr Lys Ile Asn Asp
415 420 425
TGG TAC CAT CAG TGC CTG TAG
885
Trp Tyr His Gln Cys Leu *
430 435
(2)SEQ ID NO:18-B的信息:
(i)序列特征:
(A)长度:295个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(i i)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:18-B:
Met Phe Ser Pro Leu Trp Ala Leu Ser Ala Leu Leu Leu Phe Pro Ala
1 5 10 15
Thr Glu Ala Thr Ser Gly Val Thr Thr Arg Tyr Trp Asp Cys Cys Lys
20 25 30
Pro Ser Cys Ala Trp Thr Gly Lys Ala Ser Val Ser Lys Pro Val Gly
35 40 45
Thr Cys Asp Ile Asn Asp Asn Ala Gln Thr Pro Ser Asp Leu Leu Lys
50 55 60
Ser Ser Cys Asp Gly Gly Ser Ala Tyr Tyr Cys Ser Asn Gln Gly Pro
65 70 75 80
Trp Ala Val Asn Asp Ser Leu Ser Tyr Gly Phe Ala Ala Ala Lys Leu
85 90 95
Ser Gly Lys Gln Glu Thr Asp Trp Cys Cys Gly Cys Tyr Lys Leu Thr
100 105 110
Phe Thr Ser Thr Ala Val Ser Gly Lys Gln Met Ile Val Gln Ile Thr
115 120 125
Asn Thr Gly Gly Asp Leu Gly Asn Asn His Phe Asp Ile Ala Met Pro
130 135 140
Gly Gly Gly Val Gly Ile Phe Asn Gly Cys Ser Lys Gln Trp Asn Gly
145 150 155 160
Ile Asn Leu Gly Asn Gln Tyr Gly Gly Phe Thr Asp Arg Ser Gln Cys
165 170 175
Ala Thr Leu Pro Ser Lys Trp Gln Ala Ser Cys Asn Trp Arg Phe Asp
180 185 190
Trp Phe Glu Asn Ala Asp Asn Pro Thr Val Asp Trp Glu Pro Val Thr
195 200 205
Cys Pro Gln Glu Leu Val Ala Arg Thr Gly Cys Ser Arg Thr Pro Ser
210 215 220
Ser Ser Thr Ser Ser Pro Val Asn Gln Pro Thr Ser Thr Ser Thr Thr
225 230 235 240
Ser Thr Ser Thr Thr Ser Ser Pro Pro Val Gln Pro Thr Thr Pro Ser
245 250 255
Gly Cys Thr Ala Glu Arg Trp Ala Gln Cys Gly Gly Asn Gly Trp Ser
260 265 270
Gly Cys Thr Thr Cys Val Ala Gly Ser Thr Cys Thr Lys Ile Asn Asp
275 280 285
Trp Tyr His Gln Cys Leu *
290 295
(2)SEQ ID NO:19的信息:
(i)序列特征:
(A)长度:425个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:大肠杆菌,DSM 10576
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...425
(xi)序列描述:SEQ ID NO:19:
CAAGATACAA TATGCGTTCC TCCACTATTT TGCAAACCGG CCTGGTGGCC GTTCTCCCCT
60
TCGCCGTCCA GGCCGCCTCA GGATCCGGCA AGTCCACCAG ATATTGGGAC TGCTGCAAAC
120
CATCTTGTGC CTGGTCCGGC AAGGCTTCTG TCAACCGCCC TGTTCTCGCC TGCAACGCAA
180
ACAACAACCC GCTGAACGAC GCCAACGTCA AGTCAGGATG TGATGGCGGT TCTGCATACA
240
CCTGTGCCAA CAACTCTCCC TGGGCAGTGA ATGACAATCT GGCCTACGGC TTCGCGGCCA
300
CAAAACTCAG CGGGGGGACC GAGTCATCTT GGTGCTGCGC CTGTTATGCC CTCACATTCA
360
CATCGGGTCC TGTTTCTGGC AAAACCTTGG TTGTCCAGTC TACCAGTACC GGTGGTGATC
420
TTGGC
425
(2)SEQ ID NO:20的信息:
(i)序列特征:
(A)长度:141个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:20:
Met Arg Ser Ser Thr Ile Leu Gln Thr Gly Leu Val Ala Val Leu Pro
1 5 10 15
Phe Ala Val Gln Ala Ala Ser Gly Ser Gly Lys Ser Thr Arg Tyr Trp
20 25 30
Asp Cys Cys Lys Pro Ser Cys Ala Trp Ser Gly Lys Ala Ser Val Asn
35 40 45
Arg Pro Val Leu Ala Cys Asn Ala Asn Asn Asn Pro Leu Asn Asp Ala
50 55 60
Asn Val Lys Ser Gly Cys Asp Gly Gly Ser Ala Tyr Thr Cys Ala Asn
65 70 75 80
Asn Ser Pro Trp Ala Val Asn Asp Asn Leu Ala Tyr Gly Phe Ala Ala
85 90 95
Thr Lys Leu Ser Gly Gly Thr Glu Ser Ser Trp Cys Cys Ala Cys Tyr
100 105 110
Ala Leu Thr Phe Thr Ser Gly Pro Val Ser Gly Lys Thr Leu Val Val
115 120 125
Gln Ser Thr Ser Thr Gly Gly Asp Leu Gly
130 135
(2)SEQ ID NO:21的信息:
(i)序列特征:
(A)长度:108个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Saccobolus dilutellus
(B)菌株:CBS 275.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...108
(xi)序列描述:SEQ ID NO:21:
TCG GCT TGC GAT AAC GGT GGT GGC ACT GCA TAC ATG TGT GCC AGC CAG
Ser Ala Cys Asp Asn Gly Gly Gly Thr Ala Tyr Met Cys Ala Ser Gln
1 5 10 15
GAG CCG TGG GCA GTG AGC TCC AAC GTC GCG TAC GGC TTT GCT GCA GTT
Glu Pro Trp Ala Val Ser Ser Asn Val Ala Tyr Gly Phe Ala Ala Val
20 25 30
AGA ATC AGC GGA
Arg Ile Ser Gly
35
(2)SEQ ID NO:22的信息:
(i)序列特征:
(A)长度:36个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:22:
Ser Ala Cys Asp Asn Gly Gly Gly Thr Ala Tyr Met Cys Ala Ser Gln
1 5 10 15
Glu Pro Trp Ala Val Ser Ser Asn Val Ala Tyr Gly Phe Ala Ala Val
20 25 30
Arg Ile Ser Gly
35
(2)SEQ ID NO:23的信息:
(i)序列特征:
(A)长度:99个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Thermonyces Verrucosus
(B)菌株:CBS 285.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...99
(xi)序列描述:SEQ ID NO:23:
GCC TGC AAC GCA AAC TTC CAG CGC ATC AGT GAC CCC AAC GCC AAG TCG
Ala Cys Asn Ala Asn Phe Gln Arg Ile Ser Asp Pro Asn Ala Lys Ser
GGC TGC GAT GGT GGC TCG GCC TTC TCT TGC GCC AAA CAA ACC CCT TGG
Gly Cys Asp Gly Gly Ser Ala Phe Ser Cys Ala Lys Gln Thr Pro Trp
GCC
Ala
(2)SEQ ID NO:24的信息:
(i)序列特征:
(A)长度:33个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:24:
Ala Cys Asn Ala Asn Phe Gln Arg Ile Ser Asp Pro Asn Ala Lys Ser
1 5 10 15
Gly Cys Asp Gly Gly Ser Ala Phe Ser Cys Ala Lys Gln Thr Pro Trp
20 25 30
Ala
(2)SEQ ID NO:25的信息:
(i)序列特征:
(A)长度:225个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:鹿角团炭角菌
(B)菌株:CBS 284.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...225
(xi)序列描述:SEQ ID NO:25:
GAC CAG CCG CTC GGC GGA CAA CGG ACG CGACCA AGG AGC GCG TGC GAC
48
Asp Gln Pro Leu Gly Gly Gln Arg Thr Arg Pro Arg Ser Ala Cys Asp
35 40 45
AAT GGC GGC TCT GCA TAC ATG TGC AGC AAC CAG AGC CCG TGG GCC GTC
96
Asn Gly Gly Ser Ala Tyr Met Cys Ser Asn Gln Ser Pro Trp Ala Val
50 55 60 65
GAC GAT TCT CTC AGT TAC GGA TGG GCT GCC GTT AGG ATC TAT GGA CAT
144
Asp Asp Ser Leu Ser Tyr Gly Trp Ala Ala Val Arg Ile Tyr Gly His
70 75 80
ACC GAA ACT ACT TGG TGC TGC GCT TGC TAC GAG TTG ACT TTT ACC AGC
192
Thr Glu Thr Thr Trp Cys Cys Ala Cys Tyr Glu Leu Thr Phe Thr Ser
85 90 95
GGT CCG GTT AGC GGC AAG AAG ATG ATT GTT CAG
225
Gly Pro Val Ser Gly Lys Lys Met Ile Val Gln
100 105
(2)SEQ ID NO:26的信息:
(i)序列特征:
(A)长度:75个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:26:
Asp Gln Pro Leu Gly Gly Gln Arg Thr Arg Pro Arg Ser Ala Cys Asp
1 5 10 15
Asn Gly Gly Ser Ala Tyr Met Cys Ser Asn Gln Ser Pro Trp Ala Val
20 25 30
Asp Asp Ser Leu Ser Tyr Gly Trp Ala Ala Val Arg Ile Tyr Gly His
35 40 45
Thr Glu Thr Thr Trp Cys Cys Ala Cys Tyr Glu Leu Thr Phe Thr Ser
50 55 60
Gly Pro Val Ser Gly Lys Lys Met Ile Val Gln
65 70 75
(2)SEQ ID NO:27的信息:
(i)序列特征:
(A)长度:177个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:尖镰孢ssp lycopersici
(B)菌株:CBS 645.78
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...177
(xi)序列描述:SEQ ID NO:27:
AGA AAC GAC AAC CCC ATC TCC AAC ACC AAC GCT GTC AAC GGT TGT GAG
48
Arg Asn Asp Asn Pro Ile Ser Asn Thr Asn Ala Val Asn Gly Cys Glu
30 35 40 45
GGT GGT GGT TCT GCT TAT GCT TGC ACC AAC TAC TCT CCC TGG GCT GTC
96
Gly Gly Gly Ser Ala Tyr Ala Cys Thr Asn Tyr Ser Pro Trp Ala Val
50 55 60
AAC GAT GAG CTT GCC TAC GGT TTC GCT GCT ACC AAG ATC TCC GGT GGC
144
Asn Asp Glu Leu Ala Tyr Gly Phe Ala Ala Thr Lys Ile Ser Gly Gly
65 70 75
TCC GAG GCC AGC TGG TGC TGT GCC TGC TAT CTA
177
Ser Glu Ala Ser Trp Cys Cys Ala Cys Tyr Leu
80 85
(2)SEQ ID NO:28的信息:
(i)序列特征:
(A)长度:59个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:28:
Arg Asn Asp Asn Pro Ile Ser Asn Thr Asn Ala Val Asn Gly
Cys Glu
1 5 10
15
Gly Gly Gly Ser Ala Tyr Ala Cys Thr Asn Tyr Ser Pro Trp
Ala Val
20 25 30
Asn Asp Glu Leu Ala Tyr Gly Phe Ala Ala Thr Lys Ile Ser
Gly Gly
35 40 45
Ser Glu Ala Ser Trp Cys Cys Ala Cys Tyr Leu
50 55
(2)SEQ ID NO:29的信息:
(i)序列特征:
(A)长度:63个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Nectria pinea
(B)菌株:CBS 279.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...63
(xi)序列描述:SEQ ID NO:29:
AGC GGC TGT GAC GGT GGT TCT GCC TAC GCC TGT GCA AAC AAC
TCC CCT 48
Ser Gly Cys Asp Gly Gly Ser Ala Tyr Ala Cys Ala Asn Asn
Ser Pro
60 65 70
75
TGG GCT GTC AAC GAT
63
Trp Ala Val Asn Asp
80
(2)SEQ ID NO:30的信息:
(i)序列特征:
(A)长度:21个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:30:
Ser Gly Cys Asp Gly Gly Ser Ala Tyr Ala Cys Ala Asn Asn
Ser Pro
1 5 10
15
Trp Ala Val Asn Asp
20
(2)SEQ ID NO:31的信息:
(i)序列特征:
(A)长度:177个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:灰腐质霉Traeen
(B)菌株:ATCC 22726
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...177
(xi)序列描述:SEQ ID NO:31:
AAC CAG CCT GTC TTC ACT TGC GAC GCC AAA TTC CAG CGC ATC
ACC GAC 48
Asn Gln Pro Val Phe Thr Cys Asp Ala Lys Phe Gln Arg Ile
Thr Asp
25 30 35
CCC AAT ACC AAG TCG GGC TGC GAT GGC GGC TCG GCC TTT TCG
TGT GCT 96
Pro Asn Thr Lys Ser Gly Cys Asp Gly Gly Ser Ala Phe Ser
Cys Ala
40 45 50
GAC CAA ACC CCC TGG GCT CTG AAC GAC GAT TTC GCC TAT GGC
TTC GCT 144
Asp Gln Thr Pro Trp Ala Leu Asn Asp Asp Phe Ala Tyr Gly
Phe Ala
55 60 65
GCC ACG GCT ATT TCG GGT GGA TCG GAA GCC TCG
177
Ala Thr Ala Ile Ser Gly Gly Ser Glu Ala Ser
70 75 80
(2)SEQ ID NO:32的信息:
(i)序列特征:
(A)长度:59个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:32:
Asn Gln Pro Val Phe Thr Cys Asp Ala Lys Phe Gln Arg Ile
Thr Asp
1 5 10
15
Pro Asn Thr Lys Ser Gly Cys Asp Gly Gly Ser Ala Phe Ser
Cys Ala
20 25 30
Asp Gln Thr Pro Trp Ala Leu Asn Asp Asp Phe Ala Tyr Gly
Phe Ala
35 40 45
Ala Thr Ala Ile Ser Gly Gly Ser Glu Ala Ser
50 55
(2)SEQ ID NO:33的信息:
(i)序列特征:
(A)长度:153个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:黑腐质霉Omvik
(B)菌株:CBS 819.73
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...153
(xi)序列描述:SEQ ID NO:33:
GTC TAC GCC TGC AAC GCA AAC TTC CAG CGC ATC ACC GAC GCC
AAC GCC 48
Val Tyr Ala Cys Asn Ala Asn Phe Gln Arg Ile Thr Asp Ala
Asn Ala
60 65 70
75
AAG TCC GGC TGC GAT GGC GGC TCC GCC TTC TCG TGC GCC AAC
CAG ACC 96
Lys Ser Gly Cys Asp Gly Gly Ser Ala Phe Ser Cys Ala Asn
Gln Thr
80 85
90
CCG TGG GCC GTG AGC GAC GAC TTT GCC TAC GGT TTC GCG GCT
ACG GCG 144
Pro Trp Ala Val Ser Asp Asp Phe Ala Tyr Gly Phe Ala Ala
Thr Ala
95 100 105
CTC GCC GGC
153
Leu Ala Gly
110
(2)SEQ ID NO:34的信息:
(i)序列特征:
(A)长度:51个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:34:
Val Tyr Ala Cys Asn Ala Asn Phe Gln Arg Ile Thr Asp Ala
Asn Ala
1 5 10
15
Lys Ser Gly Cys Asp Gly Gly Ser Ala Phe Ser Cys Ala Asn
Gln Thr
20 25 30
Pro Trp Ala Val Ser Asp Asp Phe Ala Tyr Gly Phe Ala Ala
Thr Ala
35 40 45
Leu Ala Gly
50
(2)SEQ ID NO:35的信息:
(i)序列特征:
(A)长度:181个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Cladorrhinum forcundissimun
(B)菌株:ATCC 62373
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...181
(xi)序列描述:SEQ ID NO:35:
GTC AAC CGC CCT GTC CTC GCC TGC GAC GCA AAC AAC AAC CCT
CTG ACC 48
Val Asn Arg Pro Val Leu Ala Cys Asp Ala Asn Asn Asn Pro
Leu Thr
1 5 10
15
GAC GCC GGC GTC AAG TCC GGA TGT GAT GGC GGT TCT GCA TAC
ACC TGT 96
Asp Ala Gly Val Lys Ser Gly Cys Asp Gly Gly Ser Ala Tyr
Thr Cys
20 25 30
GCC AAC AAC TCC CCA TGG GCA GTG AAC GAC CAG CTC GCC TAC
GGC TTT 144
Ala Asn Asn Ser Pro Trp Ala Val Asn Asp Gln Leu Ala Tyr
Gly Phe
35 40 45
GCC GCC ACC AAA CTG AGC GGC GGA ACT GAG TCG TCA
180
Ala Ala Thr Lys Leu Ser Gly Gly Thr Glu Ser Ser
50 55 60
(2)SEQ ID NO:36的信息:
(i)序列特征:
(A)长度:60个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:36:
Val Asn Arg Pro Val Leu Ala Cys Asp Ala Asn Asn Asn Pro
Leu Thr
1 5 10
15
Asp Ala Gly Val Lys Ser Gly Cys Asp Gly Gly Ser Ala Tyr
Thr Cys
20 25 30
Ala Asn Asn Ser Pro Trp Ala Val Asn Asp Gln Leu Ala Tyr
Gly Phe
35 40 45
Ala Ala Thr Lys Leu Ser Gly Gly Thr Glu Ser Ser
50 55 60
(2)SEQ ID NO:37的信息:
(i)序列特征:
(A)长度:64个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Syspastospora boninensis
(B)菌株:NKBC 1515
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...64
(xi)序列描述:SEQ ID NO:37:
GGC TGC GAC GGC GGC AGC GCC TTC ACC TGC TCC AAC AAC TCT
CCA TGG 48
Gly Cys Asp Gly Gly Ser Ala Phe Thr Cys Ser Asn Asn Ser
Pro Trp
GCT GTG AAC GAA GAT
63
Ala Val Asn Glu Asp
(2)SEQ ID NO:38的信息:
(i)序列特征:
(A)长度:21个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:38:
Gly Cys Asp Gly Gly Ser Ala Phe Thr Cys Ser Asn Asn Ser
Pro Trp
Ala Val Asn Glu Asp
(2)SEQ ID NO:39的信息:
(i)序列特征:
(A)长度:153个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Nigrospora sp.
(B)菌株:CBS 272.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...153
(xi)序列描述:SEQ ID NO:39:
ACA AGA AAC GAC GGG CCC CTG TCC AGC CCC GAT GCC GCC TCC
GGC TGT 48
Thr Arg Asn Asp Gly Pro Leu Ser Ser Pro Asp Ala Ala Ser
Gly Cys
25 30 35
GAT GGC GGC GAA GCC TTT GCC TGT TCT AAT ACC TCG CCT TGG
GCC GTC 96
Asp Gly Gly Glu Ala Phe Ala Cys Ser Asn Thr Ser Pro Trp
Ala Val
40 45 50
AGC GAC CAG CTC GCG TAC GGA TAC GTC GCC ACG TCC ATC TCC
GGC GGC 144
Ser Asp Gln Leu Ala Tyr Gly Tyr Val Ala Thr Ser Ile Ser
Gly Gly
55 60 65
ACC GAG TCA
153
Thr Glu Ser
70
(2)SEQ ID NO:40的信息:
(i)序列特征:
(A)长度:51个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:40:
Thr Arg Asn Asp Gly Pro Leu Ser Ser Pro Asp Ala Ala Ser
Gly Cys
1 5 10
15
Asp Gly Gly Glu Ala Phe Ala Cys Ser Asn Thr Ser Pro Trp
Ala Val
20 25 30
Ser Asp Gln Leu Ala Tyr Gly Tyr Val Ala Thr Ser Ile Ser
Gly Gly
35 40 45
Thr Glu Ser
50
(2)SEQ ID NO:41的信息:
(i)序列特征:
(A)长度:159个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:弗雷生刺枝霉
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...159
(xi)序列描述:SEQ ID NO:41:
GTC CGA ACG TGT AGT GCC AAC GAC TCG CCC TTG TCC GAC CCA
AAT GCC 48
Val Arg Thr Cys Ser Ala Asn Asp Ser Pro Leu Ser Asp Pro
Asn Ala
55 60 65
CCA AGT GGG TGT GAC GGT GGT AGC GCC TTC ACT TGT TCC AAC
AAC TCC 96
Pro Ser Gly Cys Asp Gly Gly Ser Ala Phe Thr Cys Ser Asn
Asn Ser
70 75 80
CCG TGG GCA GTC GAT GAC CAG ACA GCT TAT GGC TTT GCG GCA
ACA GCC 144
Pro Trp Ala Val Asp Asp Gln Thr Ala Tyr Gly Phe Ala Ala
Thr Ala
85 90 95
ATC AGT GGC CAG TCC
159
Ile Ser Gly Gln Ser
100
(2)SEQ ID NO:42的信息:
(i)序列特征:
(A)长度:53个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:42:
Val Arg Thr Cys Ser Ala Asn Asp Ser Pro Leu Ser Asp Pro
Asn Ala
1 5 10
15
Pro Ser Gly Cys Asp Gly Gly Ser Ala Phe Thr Cys Ser Asn
Asn Ser
20 25 30
Pro Trp Ala Val Asp Asp Gln Thr Ala Tyr Gly Phe Ala Ala
Thr Ala
35 40 45
Ile Ser Gly Gln Ser
50
(2)SEQ ID NO:43的信息:
(i)序列特征:
(A)长度:153个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Ecidia glandulosa
(B)菌株:CBS 277.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...153
(xi)序列描述:SEQ ID NO:43:
TGT GAG AAG AAC GAC AAC CCC TTA GCT GAC TTC AGC ACG AAA
TCC GGG 48
Cys Glu Lys Asn Asp Asn Pro Leu Ala Asp Phe Ser Thr Lys
Ser Gly
55 60 65
TGT GAA AGC GGA GGT TCG GCT TAT ACG TGT AAC AAC CAA TCA
CCA TGG 96
Cys Glu Ser Gly Gly Ser Ala Tyr Thr Cys Asn Asn Gln Ser
Pro Trp
70 75 80
85
GCC GTC AAT GAC TTG GTG TCG TAT GGC TTC GCC GCC ACA GCG
ATC AAT 144
Ala Val Asn Asp Leu Val Ser Tyr Gly Phe Ala Ala Thr Ala
Ile Asn
90 95
100
GGT GGC AAT
153
Gly Gly Asn
(2)SEQ ID NO:44的信息:
(i)序列特征:
(A)长度:51个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:44:
Cys Glu Lys Asn Asp Asn Pro Leu Ala Asp Phe Ser Thr Lys
Ser Gly
1 5 10
15
Cys Glu Ser Gly Gly Ser Ala Tyr Thr Cys Asn Asn Gln Ser
Pro Trp
20 25 30
Ala Val Asn Asp Leu Val Ser Tyr Gly Phe Ala Ala Thr Ala
Ile Asn
35 40 45
Gly Gly Asn
50
(2)SEQ ID NO:45的信息:
(i)序列特征:
(A)长度:171个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:Coniothecium sp.
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...171
(xi)序列描述:SEQ ID NO:45:
AGC CGC CCC GTC GGA ACC TGC AAG AGG AAC GAC AAC CCC CTC
TCC GAC 48
Ser Arg Pro Val Gly Thr Cys Lys Arg Asn Asp Asn Pro Leu
Ser Asp
55 60 65
CCC GAT GCC AAG TCC GGC TGC GAC GGC GGC GGC GCC TTC ATG
TGC TCC 96
Pro Asp Ala Lys Ser Gly Cys Asp Gly Gly Gly Ala Phe Met
Cys Ser
70 75 80
ACC CAG CAG CCG TGG GCC GTC AAC GAC AAT CTG GCA TAT GGC
TTC GCC 144
Thr Gln Gln Pro Trp Ala Val Asn Asp Asn Leu Ala Tyr Gly
Phe Ala
85 90 95
GCC ACG GCC ATC AGC GGC GGC AAC GAG
171
Ala Thr Ala Ile Ser Gly Gly Asn Glu
100 105
(2)SEQ ID NO:46的信息:
(i)序列特征:
(A)长度:57个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:46:
Ser Arg Pro Val Gly Thr Cys Lys Arg Asn Asp Asn Pro Leu
Ser Asp
1 5 10
15
Pro Asp Ala Lys Ser Gly Cys Asp Gly Gly Gly Ala Phe Met
Cys Ser
20 25 30
Thr Gln Gln Pro Trp Ala Val Asn Asp Asn Leu Ala Tyr Gly
Phe Ala
35 40 45
Ala Thr Ala Ile Ser Gly Gly Asn Glu
50 55
(2)SEQ ID NO:47的信息:
(i)序列特征:
(A)长度:159个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:CBS 271.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...159
(xi)序列描述:SEQ ID NO:47:
ACT TGC AAC AAG AAC GAC GGG CCC CTG TCC AGC CCC GAT GCC
GCC TCC 48
Thr Cys Asn Lys Asn Asp Gly Pro Leu Ser Ser Pro Asp Ala
Ala Ser
60 65 70
GGC TGT GAT GGC GGC GAA GCC TTT GCC TGT TCT AAT ACC TCG
CCT TGG 96
Gly Cys Asp Gly Gly Glu Ala Phe Ala Cys Ser Asn Thr Ser
Pro Trp
75 80 85
GCC GTC AGC GAC CAG CTC GCG TAC GGA TAC CTC GCC ACG TCC
ATC TCC 144
Ala Val Ser Asp Gln Leu Ala Tyr Gly Tyr Leu Ala Thr Ser
Ile Ser
90 95 100
105
GGC GGC ACC GAG TCG
159
Gly Gly Thr Glu Ser
110
(2)SEQ ID NO:48的信息:
(i)序列特征:
(A)长度:个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:48:
Thr Cys Asn Lys Asn Asp Gly Pro Leu Ser Ser Pro Asp Ala
Ala Ser
1 5 10
15
Gly Cys Asp Gly Gly Glu Ala Phe Ala Cys Ser Asn Thr Ser
Pro Trp
20 25 30
Ala Val Ser Asp Gln Leu Ala Tyr Gly Tyr Leu Ala Thr Ser
Ile Ser
35 40 45
Gly Gly Thr Glu Ser
50
(2)SEQ ID NO:49的信息:
(i)序列特征:
(A)长度:84个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:CBS 270.96
(ix)特征:
(A)名称/关键词:CDS
(B)位置:1...84
(xi)序列描述:SEQ ID NO:49:
CCA GTT TTC TCC TGT GAC AAG TAC GAC AAC CCT CTA CCT GAC
GCC AAT 48
Pro Val Pne Ser Cys Asp Lys Tyr Asp Asn Pro Leu Pro Asp
Ala Asn
55 60 65
GCT GTG TCC GGG TGT GAC CCC GGA GGT ACT GCC TTC
84
Ala Val Ser Gly Cys Asp Pro Gly Gly Thr Ala Phe
70 75 80
(2)SEQ ID NO:50的信息:
(i)序列特征:
(A)长度:28个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:蛋白质
(xi)序列描述:SEQ ID NO:50:
Pro Val Phe Ser Cys Asp Lys Tyr Asp Asn Pro Leu Pro Asp
Ala Asn
1 5 10
15
Ala Val Ser Gly Cys Asp Pro Gly Gly Thr Ala Phe
20 25
(2)SEQ ID NO:51的信息:
(i)序列特征:
(A)长度:147个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:棉色二孢,CBS 274.96
(xi)序列描述:SEQ ID NO:51:
ACCTGCGACG CCTGCGACAG CCCCCTCAGC GACTACGACG CCAAGTCCGG
CTGCGACGGC 60
GGTAGCGCATACACCTGCAC CTACTCTACC CCCTGGGCCG TCGACGACAA
CCTCTCCTAC 120
GGTTTCGCCG CCGCCAAGCT GAGCGGA
147
(2)SEQ ID NO:52的信息:
(i)序列特征:
(A)长度:49个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:52:
Thr Cys Asp Ala Cys Asp Ser Pro Leu Ser Asp Tyr Asp
Ala Lys Ser
1 5 10
15
Gly Cys Asp Gly Gly Ser Ala Tyr Thr Cys Thr Tyr Ser
Thr Pro Trp
20 25
30
Ala Val Asp Asp Asn Leu Ser Tyr Gly Phe Ala Ala Ala
Lys Leu Ser
35 40 45
Gly
(2)SEQ ID NO:53的信息:
(i)序列特征:
(A)长度:135个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:Ulospora bilgramii,NKBC 1444
(xi)序列描述:SEQ ID NO:53:
CCACTAGCAG ATTTCACCGG TGGAACCGGC TGTAATGGCG GTTCGACATT
CTCATGCTCA 60
AACCAACAAC CATGGGCGGT CAACGACACA TTCTCGTACG GCTTTGCGGG
CATCTTTATC 120
ACAGGCCATG TCGAG
135
(2)SEQ ID NO:54的信息:
(i)序列特征:
(A)长度:45个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:54:
Pro Leu Ala Asp Phe Thr Gly Gly Thr Gly Cys Asn Gly
Gly Ser Thr
1 5 10
15
Phe Ser Cys Ser Asn Gln Gln Pro Trp Ala Val Asn Asp
Thr Phe Ser
20 25
30
Tyr Gly Phe Ala Gly Ile Phe Ile Thr Gly His Val Glu
35 40 45
(2)SEQ ID NO:55的信息:
(i)序列特征:
(A)长度:114个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:疣孢青霉,ATCC 62396
(xi)序列描述:SEQ ID NO:55:
GCCAAATCTG GATGTGATGC TGGTGGAGGT CAAGCCTACA TGTGCTCCAA
CCAACAACCT 60
TGGGTAGTCA ACGACAACCT CGCCTACGGT TTCGCCGCAG TCAACATTGC
CGGC 114
(2)SEQ ID NO:56的信息:
(i)序列特征:
(A)长度:38个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:56:
Ala Lys Ser Gly Cys Asp Ala Gly Gly Gly Gln Ala Tyr
Met Cys Ser
1 5 10
15
Asn Gln Gln Pro Trp Val Val Asn Asp Asn Leu Ala Tyr
Gly Phe Ala
20 25
30
Ala Val Asn Ile Ala Gly
35
(2)SEQ ID NO:57的信息:
(i)序列特征:
(A)长度:113个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:点孔座壳
(xi)序列描述:SEQ ID NO:57:
TTCGACGTCC GGGTGCGACA ATGGCGGCAG CGCCTTCATG TGCTCTAACC
AAAGCCCCTG 60
GGCCGTCAAC GACGATCTGG CCTACGGCTG GGCCGCCGTC TCAATCGCGG
GCC 113
(2)SEQ ID NO:58的信息:
(i)序列特征:
(A)长度:37个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:58:
Ser Thr Ser Gly Cys Asp Asn Gly Gly Ser Ala Phe Met
Cys Ser Asn
1 5 10
15
Gln Ser Pro Trp Ala Val Asn Asp Asp Leu Ala Tyr Gly
Trp Ala Ala
20 25
30
Val Ser Ile Ala Gly
35
(2)SEQ ID NO:59的信息:
(i)序列特征:
(A)长度:177个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:蛇形镰孢,IFO 4467
(xi)序列描述:SEQ ID NO:59:
TCAACACCGG TGCAGACGTG CGACCGCAAC GACAACCCGC TCTACGACGG
CGGGTCGACG 60
CGGTCCGGCT GCGACGCCGG CGGCGGCGCC TACATGTGCT CGTCGCACAG
CCCGTGGGCC 120
GTCAGCGACA GCCTCTCGTA CGGCTGGGCG GCCGTCCGCA TCGCCGGCCA
GTCCGAG 177
(2)SEQ ID NO:60的信息:
(i)序列特征:
(A)长度:59个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:60:
Ser Thr Pro Val Gln Thr Cys Asp Arg Asn Asp Asn Pro
Leu Tyr Asp
1 5 10
15
Gly Gly Ser Thr Arg Ser Gly Cys Asp Ala Gly Gly Gly
Ala Tyr Met
20 25
30
Cys Ser Ser His Ser Pro Trp Ala Val Ser Asp Ser Leu
Ser Tyr Gly
35 40 45
Trp Ala Ala Val Arg Ile Ala Gly Gln Ser Glu
55
(2)SEQ ID NO:61的信息:
(i)序列特征:
(A)长度:150个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:Thielavia thermophila,CBS 174.70
(xi)序列描述:SEQ ID NO:61:
AACGACAACC CCATCTCCAA CACCAACGCT GTCAACGGTT GTGAGGGTGG
TGGTTCTGCT 60
TACGCTTGCT CCAACTACTC TCCCTGGGCT GTCAACGATG ACCTTGCCTA
CGGTTTCGCT 120
GTTACCAAGA TCTCCGGTGG CTCCGAGGCC
150
(2)SEQ ID NO:62的信息:
(i)序列特征:
(A)长度:50个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:62:
Asn Asp Asn Pro Ile Ser Asn Thr Asn Ala Val Asn GlyCys Glu Gly
1 5 10
15
Gly Gly Ser Ala Tyr Ala Cys Ser Asn Tyr Ser Pro Trp
Ala Val Asn
20 25
30
Asp Asp Leu Ala Tyr Gly Phe Ala Val Thr Lys Ile Ser
Gly Gly Ser
35 40 45
(2)SEQ ID NO:63的信息:
(i)序列特征:
(A)长度:180个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(A)生物体:管毛壳,CBS 799.83
(xi)序列描述:SEQ ID NO:63:
GTCAATCAGC CCATCCGAAC GTGTAGTGCC AACGACTCGC CCTTGTCCGA
CCCAAATACC 60
CCAAGTGGCT GTGACGGTGG TAGCGCCTTC ACTTGTTCCA ACAACTCCCC
GTGGGCAGTC 120
GATGACCAGA CAGCTTATGG CTTTGCGGCA ACAGCCATCA GTGGCCAGTC
CGAGAGCAGC 180
(2)SEQ ID NO:64的信息:
(i)序列特征:
(A)长度:60个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:64:
Val Asn Gln Pro Ile Arg Thr Cys Ser Ala Asn Asp Ser
Pro Leu Ser
1 5 10
15
Asp Pro Asn Thr Pro Ser Gly Cys Asp Gly Gly Ser Ala
Phe Thr Cys
20 25
30
Ser Asn Asn Ser Pro Trp Ala Val Asp Asp Gln Thr Ala
Tyr Gly Phe
35 40 45
Ala Ala Thr Ala Ile Ser Gly Gln Ser Glu Ser Ser
50 55 60
(2)SEQ ID NO:65的信息:
(i)序列特征:
(A)长度:159个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:Chaetomium virescens,CBS 547.75
(xi)序列描述:SEQ ID NO:65:
ACCTGCGACA AGAAGGACAA CCCCATCTCT GATGCCAACG CCAAGAGCGG
CTGTGATGGC 60
GGTTCTGCTT TCGCCTGCAC CAACTACTCT CCCTTCGCCG TCAACGACAA
CCTCGCCTAC 120
GGTTTCGCTG CCACCAAGCT TGCTGGAGGC TCCGAGGCT
159
(2)SEQ ID NO:66的信息:
(i)序列特征:
(A)长度:53个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:66:
Thr Cys Asp Lys Lys Asp Asn Pro Ile Ser Asp Ala Asn
Ala Lys Ser
1 5 10
15
Gly Cys Asp Gly Gly Ser Ala Phe Ala Cys Thr Asn Tyr
Ser Pro Phe
20 25
30
Ala Val Asn Asp Asn Leu Ala Tyr Gly Phe Ala Ala Thr
Lys Leu Ala
35 40 45
Gly Gly Ser Glu Ala
50
(2)SEQ ID NO:67的信息:
(i)序列特征:
(A)长度:81个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:葫芦科刺盘孢
(xi)序列描述:SEQ ID NO:67:
ACCTGCTACG CCAATGACCA GCGCATCGCC GACCGCAGCA CCAAGTCCGG
CTGCGACGGC 60
GGCTCGGCCT ACTCCTGTTC T
81
(2)SEQ ID NO:68的信息:
(i)序列特征:
(A)长度:27个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:68:
Thr Cys Tyr Ala Asn Asp Gln Arg Ile Ala Asp Arg Ser
Thr Lys Ser
1 5 10
15
Gly Cys Asp Gly Gly Ser Ala Tyr Ser Cys Ser
20 25
(2)SEQ ID NO:69的信息:
(i)序列特征:
(A)长度:160个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:
(B)菌株:闪光须霉
(xi)序列描述:SEQ ID NO:69:
ACCTGTGACA AGAAGGACAA CCCCATCTCA AACTTGAACG CTGTCAACGG
TTGTGAGGGT 60
GGTGGTTCTG CCTTCGCCTG CACCAACTAC TCTCCTTGGG CGGTCAATGA
CAACCTTGCC 120
TACGGCTTCG CTGCAACCAA GCTTGCCGGTGGCTCCGAGG
160
(2)SEQ ID NO:70的信息:
(i)序列特征:
(A)长度:53个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:70:
Thr Cys Asp Lys Lys Asp Asn Pro Ile Ser Asn Leu Asn
Ala Val Asn
1 5 10
15
Gly Cys Glu Gly Gly Gly Ser Ala Phe Ala Cys Thr Asn
Tyr Ser Pro
20 25
30
Trp Ala Val Asn Asp Asn Leu Ala Tyr Gly Phe Ala Ala
Thr Lys Leu
35 40 45
Ala Gly Gly Ser Glu
50
(2)SEQ ID NO:71的信息:
(i)序列特征:
(A)长度:165个碱基对
(B)类型:核酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子型:cDNA
(vi)原始来源:粉红单端孢,IFO 5372
(xi)序列描述:SEQ ID NO:71:
CCAGTAGGCA CCTGCGACGC CGGCAACAGC CCCCTCGGCG ACCCCCTGGC
CAAGTCTGGC 60
TGCGAGGGCG GCCCGTCGTA CACGTGCGCC AACTACCAGC CGTGGGCGGT
CAACGACCAG 120
CTGGCCTACG GCTTCGCGGC CACGGCCATC AACGGCGGCA CCGAG
165
(2)SEQ ID NO:72的信息:
(i)序列特征:
(A)长度:55个氨基酸
(B)类型:氨基酸
(C)链型:单链
(D)拓扑结构:线性
(ii)分子类型:肽
(xi)序列描述:SEQ ID NO:72:
Pro Val Gly Thr Cys Asp Ala Gly Asn Ser Pro Leu Gly
Asp Pro Leu
1 5 10
15
Ala Lys Ser Gly Cys Glu Gly Gly Pro Ser Tyr Thr Cys
Ala Asn Tyr
20 25
30
Gln Pro Trp Ala Val Asn Asp Gln Leu Ala Tyr Gly Phe
Ala Ala Thr
35 40 45
Ala Ile Asn Gly Gly Thr Glu
50 55
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Dalbφge,H.,和Heldt-Hansen,H.(1994)Mel.Gen.Genet.2431 253-260Christensen,T.,Wφldike,H.,Boel,E.,Mortensen,S.B.,Hjortshφj,K.,Thim,L.,和Hansen,M.T.(1988)生物/技术6,1419-1422
Sanger,F.,Nicklen,S.,和Coul son,A.R.(1977)美国科学院学报.71,5463-5467
Devereux,J.,Haeberli,P.,和Smithies,0.(1984)核酸研究.12,387-395
Becker,D.M.& Guarante,L.1991.酶学方法.194:182-187.
Gubler,U.& Hoffman,B.J.1983.基因25:263-269.
Higuchi,B.Krummel和R.K,Saiki(1988),体外制备和特定突变DNA片段的一般方法:肽和DNA相互作用的研究.核酸研究.16:7351-7367.
Sanger,F.,Nicklen,S.& Coulson,A.R.1977.美国科学院学报A.74:5463-5467.
Axelsen等,定量免疫电泳手册,Blackwell科学出版社,1973,第2,3,4和23章.
在本申请中,按照布达佩斯条约,进行了如下保藏,其中保藏单位分别为:
德意志微生物保藏中心,简称DSM,地址为:Mascheroder Weg 16,D-38124 Braunschweig,德国;
真菌菌种保藏中心,简称CBS,地址为:Oosterstraat1,Postbus 273,NL-3740AG Baarn,荷兰。
保藏物 | 保藏日 | 保藏号 | 保藏单位 |
coleomycetous | 1996年3月12日 | CBS 270.96 | CBS |
coleomycetous | 1996年3月12日 | CBS 271.96 | CBS |
Nigrospora sp. | 1996年3月12日 | CBS 272.96 | CBS |
coleomycetous | 1996年3月12日 | CBS 273.96 | CBS |
棉色二孢 | 1996年3月12日 | CBS 274.96 | CBS |
Saccobolus dilutellus | 1996年3月12日 | CBS 275.96 | CBS |
木蹄层孔菌 | 1996年3月12日 | CBS 276.96 | CBS |
黑胶耳 | 1996年3月12日 | CBS 277.96 | CBS |
Diaporthe syngenesia | 1996年3月12日 | CBS 278.96 | CBS |
Nectria pinea | 1996年3月12日 | CBS 279.96 | CBS |
Crinipellis scabella | 1996年3月12日 | CBS 280.96 | CBS |
Macrophomina phaseolina | 1996年3月12日 | CBS 281.96 | CBS |
红根囊壶菌 | 1996年3月12日 | CBS 282.96 | CBS |
Spongipellis sp. | 1996年3月12日 | CBS 283.96 | CBS |
鹿角团炭角菌 | 1996年3月12日 | CBS 284.96 | CBS |
Thermomyces verrucosus | 1996年3月12日 | CBS 285.96 | CBS |
Acremonium sp. | 1994年9月28日 | CBS 478.94 | CBS |
啤酒糖酵母 | 1995年2月24日 | DSM 9770 | DSM |
啤酒糖酵母 | 1995年6月30日 | DSM 10080 | DSM |
啤酒糖酵母 | 1995年6月30日 | DSM 10081 | DSM |
啤酒糖酵母 | 1995年6月30日 | DSM 10082 | DSM |
大肠杆菌 | 1996年2月2日 | DSM 10511 | DSM |
大肠杆菌 | 1996年2月2日 | DSM 10512 | DSM |
大肠杆菌 | 1996年3月6日 | DSM 10571 | DSM |
大肠杆菌 | 1996年3月12日 | DSM 10576 | DSM |
大肠杆菌 | 1996年3月13日 | DSM 10583 | DSM |
大肠杆菌 | 1996年3月13日 | DSM 10584 | DSM |
大肠杆菌 | 1996年3月13日 | DSM 10585 | DSM |
大肠杆菌 | 1996年3月13日 | DSM 10586 | DSM |
大肠杆菌 | 1996年3月13日 | DSM 10587 | DSM |
大肠杆菌 | 1996年3月13日 | DSM 10588 | DSM |
本发明的优选实施方案如下:
1.一种酶制剂,该制剂实质上由具有溶纤活性的酶组成,所述酶包含具有以下序列的由14个氨基酸残基组成的第一氨基酸序列
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp Xaa
1 2 3 4 5 6 7 8 9 10 11 12 13 14
和具有以下序列的由5个氨基酸残基组成的第二氨基酸序列
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10、12和14号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个,其条件是在第一氨基酸序列中,(i)当12号位置上的氨基酸残基是Ser时,14号位置上的氨基酸残基不是Ser,和(ii)当12号位置上的氨基酸残基是Gly时,14号位置上的氨基酸残基不是Ala。
2.按照实施方案1的酶制剂,其中在第一序列的9号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地选自脯氨酸和苏氨酸。
3.按照实施方案1或2的酶制剂,其中在第一序列的10号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地是丝氨酸。
4.按照实施方案1-3之任一的酶制剂,其中在第一序列的12号位置上的氨基酸残基选自脯氨酸,苏氨酸,缬氨酸,丙氨酸,亮氨酸,异亮氨酸,苯丙氨酸,甘氨酸,半胱氨酸,天冬酰胺,谷氨酰胺,酪氨酸,丝氨酸,甲硫氨酸和色氨酸,优选地选自丙氨酸和甘氨酸。
5.按照实施方案1-4之任一的酶制剂,其中在第一序列的14号位置上的氨基酸残基选自脯氨酸,苏氨酸,缬氨酸,丙氨酸,亮氨酸,异亮氨酸,苯丙氨酸,甘氨酸,半胱氨酸,天冬酰胺,谷氨酰胺,酪氨酸,丝氨酸,甲硫氨酸,色氨酸,谷氨酸和天冬氨酸,优选地选自脯氨酸,苏氨酸,丝氨酸,丙氨酸,谷氨酸和天冬氨酸。
6.按照实施方案1-5之任一的酶制剂,其中在第二序列的4号位置上的氨基酸残基选自脯氨酸,苏氨酸,缬氨酸,丙氨酸,亮氨酸,异亮氨酸,苯丙氨酸,甘氨酸,半胱氨酸,天冬酰胺,谷氨酰胺,酪氨酸,丝氨酸,甲硫氨酸,色氨酸,谷氨酸和天冬氨酸,优选地选自丙氨酸,甘氨酸和谷氨酰胺。
7.按照实施方案1-6之任一的酶制剂,其中,在第一序列中,在第3号位置上的氨基酸残基是酪氨酸;或在第4位置上的氨基酸残基是色氨酸;或在第8号位置上的氨基酸残基是赖氨酸。
8.按照实施方案1-7之任一的酶制剂,其中所说的第一序列包括选自以下序列的氨基酸序列:
Thr Arg Tyr Trp Asp Cys Cys Lys Pro Ser Cys Ala Trp
1 2 3 4 5 6 7 8 9 10 11 12 13;
Thr Arg Tyr Trp Asp Cys Cys Lys Thr Ser Cys Ala Trp
1 2 3 4 5 6 7 8 9 10 11 12 13;和
Thr Arg Tyr Trp Asp Cys Cys Lys Pro Ser Cys Gly Trp
1 2 3 4 5 6 7 8 9 10 11 12 13。
9.按照实施方案1-8之任一的酶制剂,该酶制剂是微生物来源的,优选地是真菌来源的。
10.一种DNA构建体,该构建体编码按照实施方案1-9之任一的酶。
11.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于层菌纲(Hymenomycetes)(担子菌门(Basidiomycota))的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
12.按照实施方案11的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
13.按照实施方案11的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
14.按照实施方案11-13之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
15.按照实施方案11-14之任一的酶制剂,其中所说的酶是可以从属于由以下目的菌株获得的:蘑菇目(Agaricales)、非褶菌目(Aphyllophorales)和木耳目(Auriculariales)。
16.按照实施方案15的酶制剂,其中所说的酶是可以从属于由以下科的菌株获得的:黑耳科(Exidiaceae)、口蘑科(Tricholomataceae),鬼伞科(Coprinaceae),裂褶菌科(Schizophyllaceae),烟管菌科(Bjerkanderaceae)和多孔菌科(Polyporaceae);优选地是可以从属于由以下属的菌株获得的:黑耳属(Exidia)、毛皮伞属(Crinipellis),层孔菌属(Fomes),斑褶菇属(Panaeolus),栓菌属(Trametes),裂褶菌属(Schizophyllum)和绵皮孔菌属(Spongipellis)。
17.按照实施方案16的酶制剂,其中所说的酶是可以从属于由以下种的菌株获得的:黑胶耳(Exidia glandulosa)、Crinipellis scabella、木蹄层孔菌(Fomes fomentarius)和Spongipellis sp.;优选地是可以从以下菌株获得的:黑胶耳CBS 277.96、Crinipellis scabella CBS280.96、木蹄层孔菌CBS 276.96和Spongipellis sp.CBS 283.96。
18.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于壶菌门(Chytridiomycota)的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
19.按照实施方案18的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
20.按照实施方案18的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
21.按照实施方案18-20之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
22.按照实施方案18-21之任一的酶制剂,其中所说的酶是可以从属于壶菌纲(Chytridiomycetes)的菌株获得的,优选地是可以从属于由以下目的菌株获得的:壶菌目(Chytridiales)、Spizellomycetales、肋壶菌目(Harpochytriales)和芽枝霉目(Blastocladiales)。
23.按照实施方案22的酶制剂,其中所说的酶是可以从属于Spizellomycetaceae科的菌株获得的,优选的是可以从属于囊壶菌属(Rhizophlyctis)的菌株获得的,更优选的是可以从属于红根囊壶菌(Rhizophlyctis rosea)的菌株获得的,尤其是可以从红根囊壶菌CBS282.96获得的。
24.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于接合菌门(Zygomycota)的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
25.按照实施方案24的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
26.按照实施方案24的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
27.按照实施方案24-26之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
28.按照实施方案24-27之任一的酶制剂,其中所说的酶是可以从属于接合菌纲(Zygomycetes)的菌株获得的,优选的是可以从属于毛霉目(Mucorales)的菌株获得的。
29.按照实施方案28的酶制剂,其中所说的酶是可以从属于由毛霉科(Mucoracea)和枝霉科(Thamnidiaceae)的菌株获得的,优选的是可以从属于由根毛霉属(Rhizomucor)、须霉属(Phycomyces)和刺枝霉属(Chaetostylum)的菌株获得的。
30.按照实施方案29的酶制剂,其中所说的酶是可以从属于由Rhizomucor pusillus、闪光须霉(Phycomyces nitens)、弗雷生刺枝霉(Chaetostylum fresenii)的菌株获得的,优选地是可以从属于由以下菌株的菌株获得的:Rhizomucor pusillus IFO 4578、闪光须霉IFO 4814和弗雷生刺枝霉NRRL 2305。
31.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于由Archaeascomycetes、盘菌纲(Discomycetes)、Hermiascomycetes、腔菌纲(Loculoascomycetes)和不整囊菌纲(Plectomycetes)的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
32.按照实施方案31的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
33.按照实施方案31的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
34.按照实施方案31-33之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
35.按照实施方案31-34之任一的酶制剂,其中所说的酶是可以从属于由以下目的菌株获得的:盘菌目(Pezizales)、Phytismatales、座囊菌目(Dothideales)和散囊菌目(Eurotiales)。
36.按照实施方案35的酶制剂,其中所说的酶是可以从属于由以下科的菌株获得的:葫芦霉科(Cucurbitariaceae)、斑痣盘菌科(Rhytismataceae)、粪盘菌科(Ascobolaceae)和发菌科(Trichocomaceae);优选地是由属于由以下属的菌株产生的:色二孢属(Diplodia)、Microsphaeropsis、Ulospora、壳球孢属(Macrophomina)、粪盘菌属(Ascobolus)、Saccobolus、青霉属(Penicillium)和Thermomyces。
37.按照实施方案36的酶制剂,其中所说的酶是可以从属于由以下种的菌株获得的:棉色二孢(Diplodia gossypina)、Microsphaeropsissp.、Ulospora bilgramii、Macrophomina phaseolina、Rscobolusstictoides、Saccobolus dilutellus、疣孢青霉(Penicilliumverruculosum)、产黄青霉(Penicillium chrysogenum)和Thermomycesverrucosus;优选地是可以从属于由以下菌株的菌株获得的:棉色二孢CBS 274.96、Ulospora bilgramii NKBC 1444、Macrophomina phaseolinaCBS 281.96、Saccobolus dilutellus CBS 275.96、疣孢青霉ATCC 62396、产黄青霉ATCC 9480和Thermomyces verrucosus CBS 285.96。
38.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于由间座壳目(Diaportales)、炭角菌目(Xylariales)、Trichoaphaeriales和黑痣菌目(Phyllachorales)的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr ArgXaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
39.按照实施方案38的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
40.按照实施方案38的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
41.按照实施方案38-40之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
42.按照实施方案38-41之任一的酶制剂,其中所说的酶是可以从属于由以下科的菌株的菌株获得的:炭角菌科(Xylariaceae)、黑腐皮壳科(Valsaceae)和Phyllachoraceae,优选地是可以从属于由以下属的菌株获得的:间座壳属(Diaporthe)、刺盘孢属(Colletotrichum)、黑孢属(Nigrospora)、炭角菌属(Xylaria)、Nodulisporum和孔座壳属(Poronia)。
43.按照实施方案42的酶,其中所说的酶是可以从属于由以下种的菌株获得的:Diaporthe syngenesia、葫芦科刺盘孢(Colletotrichumlagenarium)、Nigrospora sp.、鹿角团炭角菌(Xylaria hypoxylon)、Nodulisporum sp.和点孔座壳(Poronia punctata),优选地是可以从属于由以下菌株的菌株获得的:Diaporthe syngenesia CBS 278.96、葫芦科刺盘孢ATCC 52609、Nigrospora sp.CBS 272.96和鹿角团炭角菌CBS284.96。
44.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于由小赤壳科(Nectriaceae),粪壳科(Sordariaceae),毛壳科(Chaetomiaceae),Ceratostomaceae,毛球壳科(Lasiosphaeriaceae)的菌株和属于顶孢霉属(Acremonium),粘帚霉属(Gliocladium),Scytalidium,柱孢属(Cylindrocarpon)和周刺座霉属(Volutella)的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
45.按照实施方案44的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
46.按照实施方案44的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
47.按照实施方案44-46之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
48.按照实施方案44-47之任一的酶制剂,其中所说的酶是可以从属于由以下属的菌株获得的:柱孢属(Cylindrocarpon)、丛赤壳属(Nectria)、周刺座霉属(Volutella)、粪壳属(Sordaria)、梭孢壳属(Thielavia)、Sypastospora、毛壳属(Chaetomium)、毁丝霉属(Myceliophthora)、Scytalidium、Cladorrhinum、粘帚霉属(Gliocladium)、顶孢霉属(Acremonium)。
49.按照实施方案48的酶制剂,其中所说的酶是可以从属于由以下种的菌株获得的:Cylindrocarpon sp.、Nectria pinea、Volutellacolletotrichoides、粪生粪壳(Sordaria fimicola)、大孢粪壳(Sordariamacrospora)、Thielavia terrestrls、Thielavia thermophila、Syspastospora boninensis、Cladorrhinum foecundissimum、墙毛壳(Chaetomium murorum)、Chaetomium virescens、Chaetomiumbrasiliensis、Chaetomium cunicolorum、Myceliophthora thermophila、链孢粘帚霉(Gliocladium catenulatum)、Scytalidium thermophila和Acremonium sp.;优选地是可以从属于由以下菌株的菌株获得的:链孢粘帚霉ATCC 10523和CBS 227.48、Nectria pinea CBS 279.96、Volutella colletotrichoides CBS 400.58、粪生粪壳ATCC 52644、大孢粪壳ATCC 60255、Thielavia terrestris NRRL 8126、Thielaviathermophila CBS 174.70、墙毛壳CBS 163.52、Chaetomium virescensCBS 547.75、Chaetomium brasiliensis CBS 122.65、Chaetomiumcunicolorum CBS 799.83、Syspastospora boninensis NKBC 1515、Cladorrhinum foecundissimum ATCC 62373、Myceliophthorathermophila CBS 117.65、Scytalidium thermophila ATCC 28085和Acremonium sp.CBS 478.94。
50.一种酶制剂,该酶制剂实质上由具有溶纤活性的酶组成,所述酶是可以从属于由番茄镰孢(Fusarium lycopersici)、Fusariumpassiflora、腐皮镰孢(Fusarium solani)、蛇形镰孢(Fusariumanguioides)、早熟禾镰孢(Fusarium poae)、黑腐质霉(Humicolanigrescens)和灰腐质霉(Humicola grisea)的菌株获得的,这种酶包含选自以下序列的氨基酸序列:
Xaa Thr Arg Xaa Phe Asp Xaa
1 2 3 4 5 6 7;
Xaa Thr Arg Xaa Tyr Asp Xaa
1 2 3 4 5 6 7;和
Xaa Thr Arg Xaa Trp Asp Xaa
1 2 3 4 5 6 7
其中,
在4号位置上,Xaa是Trp、Tyr或Phe;和
在1和7号位置上,Xaa是20个天然氨基酸残基中的任何一个。
51.按照实施方案50的酶制剂,其中在7号位置上的氨基酸残基是半胱氨酸(Cys)。
52.按照实施方案50的酶制剂,其中在1号位置上的氨基酸残基选自天冬氨酸(Asp)、苏氨酸(Thr)和丙氨酸(Ala)。
53.按照实施方案50-52之任一的酶制剂,其中所述的酶包含具有以下序列的由13个氨基酸残基组成的第一肽
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp
1 2 3 4 5 6 7 8 9 10 11 12 13
和具有以下序列的由5个氨基酸残基组成的第二肽
Trp Cys Cys Xaa Cys
1 2 3 4 5
其中,
在第一序列的3号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的4号位置上,氨基酸是Trp、Tyr或Phe;
在第一序列的8号位置上,氨基酸是Arg、Lys或His;
在第一序列9、10和12号的各位置上,在第二序列的4号位置上,氨基酸是20个天然氨基酸残基中的任何一个。
54.按照实施方案53之任一的酶制剂,其中所说的酶是可以从属于由以下菌株的菌株获得的:番茄尖镰孢(Fusarium oxysporum ssplycopersici)CBS 645.78、尖镰孢ssp passiflora CBS 744.79、腐皮镰孢IMI 107.511、蛇形镰孢IFO 4467、早熟禾镰孢ATCC 60883、黑腐质霉CBS 819.73和灰腐质霉ATCC 22726。
55.按照实施方案14-17、21-23、27-30、34-37、41-43、47-49、53和54之任一的酶,其中在第一序列的9号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地选自脯氨酸和苏氨酸。
56.按照实施方案14-17、21-23、27-30、34-37、41-43、47-49、53和54之任一的酶,其中在第一序列的10号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地是丝氨酸。
57.按照实施方案14-17、21-23、27-30、34-37、41-43、47-49、53和54之任一的酶,其中在第一序列的12号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸和色氨酸,优选地选自丙氨酸和甘氨酸。
58.按照实施方案14-17、21-23、27-30、34-37、41-43、47-49、53和54之任一的酶,其中在第二序列的4号位置上的氨基酸残基选自脯氨酸、苏氨酸、缬氨酸、丙氨酸、亮氨酸、异亮氨酸、苯丙氨酸、甘氨酸、半胱氨酸、天冬酰胺、谷氨酰胺、酪氨酸、丝氨酸、甲硫氨酸、色氨酸、谷氨酸和天冬氨酸,选自丙氨酸、甘氨酸和谷氨酰胺。
59.按照实施方案14-17、21-23、27-30、34-37、41-43、47-49、53和54之任一的酶,其中在第一序列的第3号位置上的氨基酸残基是酪氨酸;或在第4号位置上的氨基酸残基是色氨酸;或在第8号位置上的氨基酸残基是赖氨酸。
60.一种DNA构建体,该构建体编码按照实施方案11-59之任一的酶。
61.按照实施方案14-17、21-23、27-30、34-37、41-43、47-49、53和54之任一的酶制剂,其中所说的第一序列包含选自以下序列的氨基酸序列:
Thr Arg Tyr Trp Asp Cys Cys Lys Pro Ser Cys Ala Trp
1 2 3 4 5 6 7 8 9 10 11 12 13;
Thr Arg Tyr Trp Asp Cys Cys Lys Thr Ser Cys Ala Trp
和
1 2 3 4 5 6 7 8 9 10 11 12 13;
Thr Arg Tyr Trp Asp Cys Cys Lys Pro Ser Cys Gly Trp
1 2 3 4 5 6 7 8 9 10 11 12 13。
62.一种提供微生物菌株的方法,所述菌株包含编码存在于按照实施方案1-9、11-59和61之任一酶制剂中的酶的基因,该方法包括在标准条件下与图1所示的任何保守区的寡核苷酸杂交(例如PCR扩增)。
63.按照实施方案62的方法,其中所说的寡核苷酸包含编码包含在选自以下序列的肽中的至少五肽的核苷酸序列:
a.
Thr Arg Xaa Xaa Asp Cys Cys Xaa Xaa Xaa Cys Xaa Trp Xaa
1 2 3 4 5 6 7 8 9 10 11 12 13 14
在3或4在号位置上的氨基酸是Trp、Tyr或Phe;在8号位置上的氨基酸是Arg、Lys或His;在9、10、12和14号位置上的氨基酸分别是20个天然氨基酸残基中的任何一个;和
b.
Trp Cys Cys Xaa Cys Tyr
1 2 3 4 5 6
在4号位置上的氨基酸是20个天然氨基酸残基中的任何一个;和
c.
Xaa Pro Gly Gly Gly Xaa Gly Xaa Phe
1 2 3 4 5 6 7 8 9
1号位置上的氨基酸是Met或Ile;6和8号位置上的氨基酸分别是Leu、Ile或Val;和
d.
Gly Cys Xaa Xaa Arg Xaa Asp Trp Xaa
1 2 3 4 5 6 7 8 9
在3号位置上的氨基酸是20个天然氨基酸残基中的任何一个;在4和6号位置上的氨基酸分别是Trp、Tyr或Phe;并且在9号位置上的氨基酸是Phe或Met。
64.按照实施方案62的方法,其中所说的寡核苷酸包含互补于实施方案63的序列的核苷酸序列。
65.按照实施方案63的方法,其中所说的寡核苷酸相应于选自以下PCR引物的PCR引物:
有义,
5’-CCCCAAGCTTACIA/CGITAC/TTGGGAC/TTGC/TTGC/TAAA/G A/CC-3’
反义1,
5’-CTAGTCTAGATAA/GCAIGCA/GCAA/GCACC-3’;
反义2,
5′-CTAGTCTAGAAAIAA/G/TICCIAA/C/GICCICCICCIGG-3’;和
反义3,
5’-CTAGTCTAGAIAACCAA/GTCAA/G A/TAICG/TCC -3。
66.一种DNA构建体,该构建体包含编码显示溶纤活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:1中所示的DNA序列和/或可以从啤酒糖酵母DSM 9770中的质粒获得的DNA序列,或者
b)SEQ ID NO:1中所示的DNA序列的类似物或可以从啤酒糖酵母DSM9770中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少70%同源于SEQ ID NO:1中所示的DNA序列和/或可以从啤酒糖酵母DSM 9770中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:1中所示的DNA序列和/或可以从啤酒糖酵母DSM 9770中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少65%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:1中所示的DNA序列和/或可以从啤酒糖酵母DSM 9770中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:1中所示的DNA序列或可以从啤酒糖酵母DSM 9770中的质粒获得的DNA序列编码。
67.按照实施方案66的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于毛壳科的菌株,优选地是属于毁丝霉属的菌株,特别是属于M.thermophila的菌株,尤其是M.thermophila CBS 117.65的文库。
68.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:4中所示的DNA序列和/或可以从啤酒糖酵母DSM 10082中的质粒获得的DNA序列,或者
b)SEQ ID NO:4中所示的DNA序列的类似物或可以从啤酒糖酵母DSM10082中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少70%同源于SEQ ID NO:4中所示的DNA序列和/或可以从啤酒糖酵母DSM 10082中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:4中所示的DNA序列和/或可以从啤酒糖酵母DSM 10082中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少60%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:4中所示的DNA序列和/或可以从啤酒糖酵母DSM 10082中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:4中所示的DNA序列或可以从啤酒糖酵母DSM 10082中的质粒获得的DNA序列编码。
69.按照实施方案68的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于肉座菌科(Hypocreaceae)的菌株,优选地是属于顶孢霉属的菌株,特别是Acremonium sp.CBS 478.94的文库。
70.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:6中所示的DNA序列或可以从啤酒糖酵母DSM 10080中的质粒获得的DNA序列,或者
b)SEQ ID NO:6中所示的DNA序列的类似物或可以从啤酒糖酵母DSM10080中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少65%同源于SEQ ID NO:6中所示的DNA序列或可以从啤酒糖酵母DSM 10080中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:6中所示的DNA序列或可以从啤酒糖酵母DSM 10080中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少70%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:6中所示的DNA序列或可以从啤酒糖酵母DSM 10080中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:6中所示的DNA序列或可以从啤酒糖酵母DSM 10080中的质粒获得的DNA序列编码。
71.按照实施方案70的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于Chaetomiceae科的菌株,优选地是属于顶孢霉属的菌株,特别是Acremonium sp.CBS 478.94的文库。
72.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:8中所示的DNA序列或可以从啤酒糖酵母DSM 10081中的质粒获得的DNA序列,或者
b)SEQ ID NO:8中所示的DNA序列的类似物或可以从啤酒糖酵母DSM10081中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少75%同源于SEQ ID NO:8中所示的DNA序列或可以从啤酒糖酵母DSM 10081中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:8中所示的DNA序列或可以从啤酒糖酵母DSM 10081中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少70%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:8中所示的DNA序列或可以从啤酒糖酵母DSM 10081中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:8中所示的DNA序列或可以从啤酒糖酵母DSM 10081中的质粒获得的DNA序列编码。
73.按照实施方案72的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于毛壳科的菌株,优选地是属于Thielavia terrestris的菌株,特别是Thielavia terrestris NRRL 8126的文库。
74.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:10中所示的DNA序列或可以从大肠杆菌DSM 10512中的质粒获得的DNA序列,或者
b)SEQ ID NO:10中所示的DNA序列的类似物或可以从大肠杆菌DSM10512中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少65%同源于SEQ ID NO:10中所示的DNA序列或可以从大肠杆菌DSM 10512中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:10中所示的DNA序列或可以从大肠杆菌DSM 10512中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少55%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:10中所示的DNA序列或可以从大肠杆菌DSM 10512中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化的内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:10中所示的DNA序列或可以从大肠杆菌DSM 10512中的质粒获得的DNA序列编码。
75.按照实施方案74的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于斑痣盘菌科的菌株,优选地是属于壳球孢属的菌株,特别是属于Macrophomina phaseolina的菌株,尤其是M.phaseolicola CBS 281.96的文库。
76.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:12中所示的DNA序列或可以从大肠杆菌DSM 10511中的质粒获得的DNA序列,或者
b)SEQ ID NO:12中所示的DNA序列的类似物或可以从大肠杆菌DSM10511中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少60%同源于SEQ ID NO:12中所示的DNA序列或可以从大肠杆菌DSM 10511中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:12中所示的DNA序列或可以从大肠杆菌DSM 10511中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少60%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:12中所示的DNA序列或可以从大肠杆菌DSM 10511中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:12中所示的DNA序列或可以从大肠杆菌DSM 10511中的质粒获得的DNA序列编码。
77.按照实施方案76的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于口蘑科的菌株,优选地是属于毛皮伞属的菌株,特别是属于Crinipellisscabella的菌株,尤其是C.scabella CBS 280.96的文库。
78.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:16中所示的DNA序列或可以从大肠杆菌DSM 10571中的质粒获得的DNA序列,或者
b)SEQ ID NO:16中所示的DNA序列的类似物或可以从大肠杆菌DSM10571中的质粒获得的DNA序列的类似物,该类似物
i)同源于,优选地至少70%同源于SEQ ID NO:16中所示的DNA序列或可以从大肠杆菌DSM 10571中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:16中所示的DNA序列或可以从大肠杆菌DSM 10571中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于,优选地至少60%同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:16中所示的DNA序列或可以从大肠杆菌DSM 10571中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:16中所示的DNA序列或可以从大肠杆菌DSM 10571中的质粒获得的DNA序列编码。
79.按照实施方案78的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于周刺座霉属的菌株,优选地是属于Volutella colletotrichoides的菌株,特别V.colletotrochoides CBS 400.58的文库。
80.一种DNA构建体,该构建体包含编码显示内切葡聚糖酶活性之酶的DNA序列,所述DNA序列包括
a)SEQ ID NO:19中所示的DNA序列或可以从大肠杆菌DSM 10576中的质粒获得的DNA序列,或者
b)SEQ ID NO:19中所示的DNA序列的类似物或可以从大肠杆菌DSM10576中的质粒获得的DNA序列的类似物,该类似物
i)同源于SEQ ID NO:19中所示的DNA序列或可以从大肠杆菌DSM10576中的质粒获得的DNA序列,
ii)在本文所描述的条件下与SEQ ID NO:19中所示的DNA序列或可以从大肠杆菌DSM 10576中的质粒获得的DNA序列的相同核苷酸探针杂交,
iii)编码一种多肽,该多肽同源于由一种DNA序列编码的多肽,所述DNA序列包含SEQ ID NO:19中所示的DNA序列或可以从大肠杆菌DSM10576中的质粒获得的DNA序列,
iv)编码一种多肽,该多肽是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由SEQ ID NO:19中所示的DNA序列或可以从大肠杆菌DSM 10576中的质粒获得的DNA序列编码。
81.按照实施方案80的DNA构建体,其中所述的DNA序列是从一种DNA文库分离的或者是以该DNA文库为基础产生的,所述DNA文库是属于粪壳科的菌株,优选地是属于粪壳属的菌株,特别属于粪生粪壳的菌株,尤其是粪生粪壳ATCC 52644的文库。
82.按照实施方案66-81之任一的DNA构建体,该构建体还包含编码纤维素-结合域的DNA序列。
83.实施方案82的DNA构建体,该构建体还包含编码纤维素-结合域(CBD)的DNA序列,所述纤维素-结合域和由所述DNA构建体之DNA序列编码的酶的酶核心(催化活性域)是可操作连接的。
84.一种重组表达载体,该载体包含按照实施方案62-83之任一的DNA构建体。
85.一种细胞,该细胞包含按照实施方案66-83之任一的的DNA构建体或按照实施方案84的重组表达载体。
86.按照实施方案85的细胞,该细胞是真核细胞,特别真菌细胞,如酵母细胞或丝状真菌细胞,或所述基因所来源的内源性细胞。
87.按照细胞实施方案86的细胞,其中所说的细胞属于曲霉属(Aspergillus)、镰孢属(Fusarium)或木霉属(Trichoderma)的菌株,特别是禾谷镰孢(Fusarium graminearum)、黑曲霉(Aspergillus niger)或米曲霉(Aspergillus oryzae)的菌株。
88.一种产生显示内切葡聚糖酶活性的酶的方法,该方法包括在可以产生所述酶的条件下,培养按照实施方案85-87之任一的细胞,并从培养物中回收所述的酶。
89.一种显示内切葡聚糖酶活性的酶,该酶
a)由按照实施方案66-83之任一的DNA构建体编码,
b)由按照实施方案88的方法产生,或
c)是与一种抗纯化内切葡聚糖酶的抗体免疫学反应性的,所述内切葡聚糖酶由序列表SEQ ID NO:1、4、6、8、10、12、16、19之任一所示的DNA序列编码。
90.一种使要洗的衣物颜色澄清的方法,该方法包括用包含按照实施方案1-9、11-61和89之任一的酶制剂的浸泡、洗涤或冲洗液体处理要洗的衣物。
91.按照实施方案90的方法,其中所说的要洗的衣物用洗衣机处理。
92.按照实施方案90或91的方法,其中所说的内切葡聚糖酶在机器循环使用条件下,以每升液体1到1000S-CEVU,优选地是5到200S-CEVU的有效量存在于浸泡、洗涤或冲洗液体中。
93.按照实施方案90-92之任一的方法,其中所说的浸泡、洗涤或冲洗液体的最适pH在4和11之间,优选地在6和10.5之间。
94.按照实施方案90-93之任一的方法,其中温度在15℃和60℃之间。
95.按照实施方案90-94之任一的方法,其中所说的浸泡、洗涤或冲洗液体还包含一种或多种选自蛋白酶、纤维素酶、木聚糖酶、淀粉酶、脂酶、过氧化物酶和漆酶的酶。
96.一种洗衣组合物,该组合物包含按照实施方案1-9、11-61和89之任一的酶制剂,以及选自表面活性剂、助洗剂化合物和织物软化剂的化合物。
97.按照权利要96的洗衣组合物,该组合物还包含一种或多种选自蛋白酶、淀粉酶、脂酶、纤维素酶、木聚糖酶、过氧化物酶和漆酶的酶。
98.按照实施方案97的组合物,其中所说的表面活性剂是非离子、阴离子、阳离子、两性离子、两性或兼性表面活性剂。
99.按照实施方案98的组合物,其中所说的织物软化剂是阳离子或非离子软化剂,优选地是季铵化合物,并且其可以进一步包含或不包含一种或多种选自表面活性剂、电解质、缓冲液、抗氧剂和液态载体的化合物。
100.按照实施方案1-9、11-61和89之任一的酶在降解或修饰植物材料(例如细胞壁)上的用途。
101.按照实施方案1-9、11-61和89之任一的酶在处理织物原料或织物,优选地是在防止背染、生物抛光或“石洗”纤维素织物中的用途。
102按照实施方案1-9、11-61和89之任一的酶在处理纸浆,优选地是在剥树皮、脱纤维、纤维改性、酶促脱墨或改善排水中的用途。
103.一种酶制剂,该制剂富含按照实施方案1-9、11-61和89的显示溶纤活性的酶。
104.按照实施方案103的制剂,该制剂还包含一种或多种选自半乳聚糖酶、木聚糖酶、阿拉伯聚糖酶、果胶乙酰酯酶、聚半乳糖醛酸酶、鼠李半乳糖醛酸酶、果胶裂解酶、果胶酸盐裂解酶、内切葡聚糖酶、果胶甲酯酶、蛋白酶、脂酶、淀粉酶、角质酶、过氧化物酶、漆酶、纤维二糖水解酶和转谷氨酰胺酶的酶。
Claims (14)
1.一种显示内切葡聚糖酶活性的酶,该酶
a)具有SEQ ID NO.7所示的氨基酸序列;
b)与SEQ ID NO.7所示氨基酸序列有至少90%的等同性
c)通过对SEQ ID NO.7所示氨基酸序列进行一个或多个氨基酸的取代,缺失或添加而获得的氨基酸序列;或
d)在于5×SSC中45℃下杂交和于2×SSC中70℃下洗涤的条件下,与下列序列杂交的核酸序列所编码的多肽:
i)SEQ ID NO:6中所示的DNA序列,
ii)从啤酒糖酵母DSM 10080中的质粒获得的DNA序列,或
iii)所述i)或ii)的序列的互补链。
2.权利要求1所述的酶,其中该酶由SEQ ID NO.7所示的氨基酸序列组成,或由SEQ ID NO.7所示氨基酸序列经过一个或几个氨基酸的取代,缺失或添加而获得的氨基酸序列组成。
3.权利要求1或2所述的酶,其中该酶得自Acremonium sp.的菌株。
4.一种编码权利要求1-3任一项所述的酶的DNA序列。
5.一种DNA构建体,该构建体包含权利要求4所述的DNA序列。
6.一种重组表达载体,该载体包含权利要求5所述的DNA构建体。
7.一种细胞,该细胞包含权利要求5所述的DNA构建体或权利要求6的重组表达载体。
8.一种用于制备权利要求1-3任一项所述的酶的方法,该方法包括在可以产生所述酶的条件下,培养按照权利要求7所述的细胞,并从培养物中回收所述的酶。
9.一种使要洗的衣物颜色澄清的方法,该方法包括用包含权利要求1-3任一项所述的酶的制剂的浸泡、洗涤或冲洗液体处理要洗的衣物。
10.权利要求9的方法,其中所说的内切葡聚糖酶在机器循环使用条件下,以每升液体1到1000S-CEVU的有效量存在于浸泡、洗涤或冲洗液体中。
11.一种洗衣组合物,该组合物包含用权利要求1-3任一项所述酶的制剂,以及选自表面活性剂、助洗剂化合物和织物软化剂的化合物。
12.权利要求1-3任一项所述的酶在降解或修饰植物材料上的用途。
13.权利要求1-3任一项所述的酶在处理织物原料或织物中的用途。
14.权利要求1-3任一项所述的酶在处理纸浆中的用途。
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1996
- 1996-03-18 CN CN2009102537570A patent/CN101955921A/zh active Pending
- 1996-03-18 CN CN2009102537585A patent/CN102146362A/zh active Pending
- 1996-03-18 AT AT96905762T patent/ATE315083T1/de active
- 1996-03-18 CA CA 2214116 patent/CA2214116C/en not_active Expired - Lifetime
- 1996-03-18 CN CN200910253759.XA patent/CN102080070B/zh not_active Expired - Lifetime
- 1996-03-18 NZ NZ30316296A patent/NZ303162A/xx not_active IP Right Cessation
- 1996-03-18 EP EP19960905762 patent/EP0815209B2/en not_active Expired - Lifetime
- 1996-03-18 WO PCT/DK1996/000105 patent/WO1996029397A1/en active IP Right Grant
- 1996-03-18 JP JP52799396A patent/JP3360830B2/ja not_active Expired - Lifetime
- 1996-03-18 CN CN96193494A patent/CN1182451A/zh active Pending
- 1996-03-18 DE DE69635700.3T patent/DE69635700T3/de not_active Expired - Lifetime
- 1996-03-18 EP EP20050112118 patent/EP1683860B1/en not_active Expired - Lifetime
- 1996-03-18 DE DE0815209T patent/DE815209T1/de active Pending
- 1996-03-18 BR BRPI9607646A patent/BRPI9607646B1/pt not_active IP Right Cessation
- 1996-03-18 MX MX9706974A patent/MX9706974A/es active IP Right Grant
- 1996-03-18 CN CNA2007101816341A patent/CN101173263A/zh active Pending
- 1996-03-18 EP EP20100180155 patent/EP2431462A3/en not_active Withdrawn
- 1996-03-18 AU AU49394/96A patent/AU715423B2/en not_active Expired
- 1996-05-21 US US08/651,136 patent/US6001639A/en not_active Expired - Lifetime
-
1999
- 1999-01-13 US US09/229,911 patent/US6387690B1/en not_active Expired - Lifetime
-
2000
- 2000-07-26 AR ARP000103868 patent/AR030675A2/es unknown
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2001
- 2001-12-10 US US10/007,521 patent/US6855531B2/en not_active Expired - Fee Related
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2004
- 2004-10-14 US US10/965,499 patent/US7226773B2/en not_active Expired - Fee Related
-
2007
- 2007-04-25 US US11/740,076 patent/US20080145912A1/en not_active Abandoned
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2009
- 2009-09-25 US US12/567,302 patent/US8642730B2/en not_active Expired - Fee Related
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2012
- 2012-11-21 US US13/683,165 patent/US9023620B2/en not_active Expired - Fee Related
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
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CN104837991A (zh) * | 2012-08-16 | 2015-08-12 | 孟加拉朱特研究所 | 来自菜豆壳球孢菌的果胶降解酶及其用途 |
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