PMC Links for Nucleotide (Select 13569247) - PMC

Select item 63219081.

Metagenomic Sequencing of HIV-1 in the Blood and Female Genital Tract Reveals Little Quasispecies Diversity during Acute Infection

Anne Piantadosi, Catherine A. Freije, Christina Gosmann, Simon Ye, Daniel Park, Stephen F. Schaffner, Damien C. Tully, Todd M. Allen, Krista L. Dong, Pardis C. Sabeti, Douglas S. Kwon

J Virol. 2019 Jan 15; 93(2): e00804-18. Prepublished online 2018 Oct 31. Published online 2019 Jan 4. doi: 10.1128/JVI.00804-18

PMCID:: PMC6321908

Abstract Article PDF–2.0M

Select item 50067192.

Broad HIV-1 inhibition in vitro by vaccine-elicited CD8⁺ T cells in African adults

Gaudensia Mutua, Bashir Farah, Robert Langat, Jackton Indangasi, Simon Ogola, Brian Onsembe, Jakub T Kopycinski, Peter Hayes, Nicola J Borthwick, Ambreen Ashraf, Len Dally, Burc Barin, Annika Tillander, Jill Gilmour, Jan De Bont, Alison Crook, Drew Hannaman, Josephine H Cox, Omu Anzala, Patricia E Fast, Marie Reilly, Kundai Chinyenze, Walter Jaoko, Tomáš Hanke, the HIV-CORE 004 study group

Mol Ther Methods Clin Dev. 2016; 3: 16061. Published online 2016 Aug 31. doi: 10.1038/mtm.2016.61

PMCID:: PMC5006719

Abstract Article PDF–816K

Select item 46004583.

SERINC3 and SERINC5 restrict HIV-1 infectivity and are counteracted by Nef

Yoshiko Usami, Yuanfei Wu, Heinrich G. Göttlinger

Nature. Author manuscript; available in PMC 2016 Apr 8.

Published in final edited form as: Nature. 2015 Oct 8; 526(7572): 218–223. Published online 2015 Sep 30. doi: 10.1038/nature15400

PMCID:: PMC4600458

Abstract Article PDF–2.3M

Select item 45291534.

A Phase I Double Blind, Placebo-Controlled, Randomized Study of the Safety and Immunogenicity of Electroporated HIV DNA with or without Interleukin 12 in Prime-Boost Combinations with an Ad35 HIV Vaccine in Healthy HIV-Seronegative African Adults

Juliet Mpendo, Gaudensia Mutua, Julien Nyombayire, Rosine Ingabire, Annet Nanvubya, Omu Anzala, Etienne Karita, Peter Hayes, Jakub Kopycinski, Len Dally, Drew Hannaman, Michael A. Egan, John H. Eldridge, Kristen Syvertsen, Jennifer Lehrman, Beth Rasmussen, Jill Gilmour, Josephine H. Cox, Patricia E. Fast, Claudia Schmidt

PLoS One. 2015; 10(8): e0134287. Published online 2015 Aug 7. doi: 10.1371/journal.pone.0134287

PMCID:: PMC4529153

Abstract Article PDF–2.8M

Select item 44273325.

A Phase I Double Blind, Placebo-Controlled, Randomized Study of the Safety and Immunogenicity of an Adjuvanted HIV-1 Gag-Pol-Nef Fusion Protein and Adenovirus 35 Gag-RT-Int-Nef Vaccine in Healthy HIV-Uninfected African Adults

Gloria Omosa-Manyonyi, Juliet Mpendo, Eugene Ruzagira, William Kilembe, Elwyn Chomba, François Roman, Patricia Bourguignon, Marguerite Koutsoukos, Alix Collard, Gerald Voss, Dagna Laufer, Gwynn Stevens, Peter Hayes, Lorna Clark, Emmanuel Cormier, Len Dally, Burc Barin, Jim Ackland, Kristen Syvertsen, Devika Zachariah, Kamaal Anas, Eddy Sayeed, Angela Lombardo, Jill Gilmour, Josephine Cox, Patricia Fast, Frances Priddy

PLoS One. 2015; 10(5): e0125954. Published online 2015 May 11. doi: 10.1371/journal.pone.0125954

PMCID:: PMC4427332

Abstract Article PDF–2.0M

Select item 39465006.

Broad HIV Epitope Specificity and Viral Inhibition Induced by Multigenic HIV-1 Adenovirus Subtype 35 Vector Vaccine in Healthy Uninfected Adults

Jakub Kopycinski, Peter Hayes, Ambreen Ashraf, Hannah Cheeseman, Francesco Lala, Justyna Czyzewska-Khan, Aggeliki Spentzou, Dilbinder K. Gill, Michael C. Keefer, Jean-Louis Excler, Patricia Fast, Josephine Cox, Jill Gilmour

PLoS One. 2014; 9(3): e90378. Published online 2014 Mar 7. doi: 10.1371/journal.pone.0090378

PMCID:: PMC3946500

Abstract Article PDF–493K

Select item 37096117.

Effects of Tat proteins and Tat mutants of different human immunodeficiency virus type 1 clades on glial JC virus early and late gene transcription

Clayton A. Wright, Jonas A. Nance, Edward M. Johnson

J Gen Virol. 2013 Mar; 94(Pt 3): 514–523. doi: 10.1099/vir.0.047902-0

PMCID:: PMC3709611

Abstract Article PDF–1.1M

Select item 24280718.

Phase 1 Safety and Immunogenicity Evaluation of a Multiclade HIV-1 Candidate Vaccine Delivered by a Replication-Defective Recombinant Adenovirus Vector

Andrew T. Catanzaro, Richard A. Koup, Mario Roederer, Robert T. Bailer, Mary E. Enama, Zoe Moodie, Lin Gu, Julie E. Martin, Laura Novik, Bimal K. Chakrabarti, Bryan T. Butman, Jason G. D. Gall, C. Richter King, Charla A. Andrews, Rbecca Sheets, Phillip L. Gomez, John R. Mascola, Gary J. Nabel, Barney S. Graham, the Vaccine Research Center 006 Study Team

J Infect Dis. Author manuscript; available in PMC 2008 Jun 13.

Published in final edited form as: J Infect Dis. 2006 Dec 15; 194(12): 1638–1649. Published online 2006 Nov 8. doi: 10.1086/509258

Correction in:: J Infect Dis, volume 200 on page 1352

PMCID:: PMC2428071

Abstract Article PDF–852K

Select item 24280699.

Phase 1 Safety and Immunogenicity Evaluation of a Multiclade HIV-1 DNA Candidate Vaccine

Barney S. Graham, Richard A. Koup, Mario Roederer, Robert T. Bailer, Mary E. Enama, Zoe Moodie, Julie E. Martin, Margaret M. McCluskey, Bimal K. Chakrabarti, Laurie Lamoreaux, Charla A. Andrews, Phillip L. Gomez, John R. Mascola, Gary J. Nabel, Vaccine Research Center 004 Study Team

J Infect Dis. Author manuscript; available in PMC 2008 Jun 13.

Published in final edited form as: J Infect Dis. 2006 Dec 15; 194(12): 1650–1660. Published online 2006 Nov 8. doi: 10.1086/509259

PMCID:: PMC2428069

Abstract Article PDF–1.7M

Select item 182109410.

Efficient protein boosting after plasmid DNA or recombinant adenovirus immunization with HIV-1 vaccine constructs

Yuuei Shu, Sarah Winfrey, Zhi-yong Yang, Ling Xu, Srinivas S. Rao, Indresh Srivastava, Susan W. Barnett, Gary J. Nabel, John R. Mascola

Vaccine. Author manuscript; available in PMC 2008 Feb 9.

Published in final edited form as: Vaccine. 2007 Feb 9; 25(8): 1398–1408. Published online 2006 Nov 7. doi: 10.1016/j.vaccine.2006.10.046

PMCID:: PMC1821094

Abstract Article PDF–221K

Select item 54411411.

Evidence for Heterogeneous Selective Pressures in the Evolution of the env Gene in Different Human Immunodeficiency Virus Type 1 Subtypes

Simon A. A. Travers, Mary J. O'Connell, Grace P. McCormack, James O. McInerney

J Virol. 2005 Feb; 79(3): 1836–1841. doi: 10.1128/JVI.79.3.1836-1841.2005

PMCID:: PMC544114

Abstract Article PDF–181K

Select item 26256212.

Immunogenicity of Multiple Gene and Clade Human Immunodeficiency Virus Type 1 DNA Vaccines

Wing-Pui Kong, Yue Huang, Zhi-Yong Yang, Bimal K. Chakrabarti, Zoe Moodie, Gary J. Nabel

J Virol. 2003 Dec; 77(23): 12764–12772. doi: 10.1128/JVI.77.23.12764-12772.2003

PMCID:: PMC262562

Abstract Article PDF–173K

Select item 18740613.

Variability at Human Immunodeficiency Virus Type 1 Subtype C Protease Cleavage Sites: an Indication of Viral Fitness?

Tulio de Oliveira, Susan Engelbrecht, Estrelita Janse van Rensburg, Michelle Gordon, Karen Bishop, Jan zur Megede, Susan W. Barnett, Sharon Cassol

J Virol. 2003 Sep; 77(17): 9422–9430. doi: 10.1128/JVI.77.17.9422-9430.2003

PMCID:: PMC187406

Abstract Article PDF–205K

Select item 14109014.

Molecular Characteristics of Human Immunodeficiency Virus Type 1 Subtype C Viruses from KwaZulu-Natal, South Africa: Implications for Vaccine and Antiretroviral Control Strategies

M. Gordon, T. De Oliveira, K. Bishop, H. M. Coovadia, L. Madurai, S. Engelbrecht, E. Janse van Rensburg, A. Mosam, A. Smith, S. Cassol

J Virol. 2003 Feb; 77(4): 2587–2599. doi: 10.1128/JVI.77.4.2587-2599.2003

PMCID:: PMC141090

Abstract Article PDF–1.4M

Select item 13702715.

Human Immunodeficiency Virus Type 1 Subtype C Molecular Phylogeny: Consensus Sequence for an AIDS Vaccine Design?

V. Novitsky, U. R. Smith, P. Gilbert, M. F. McLane, P. Chigwedere, C. Williamson, T. Ndung'u, I. Klein, S. Y. Chang, T. Peter, I. Thior, B. T. Foley, S. Gaolekwe, N. Rybak, S. Gaseitsiwe, F. Vannberg, R. Marlink, T. H. Lee, M. Essex

J Virol. 2002 Jun; 76(11): 5435–5451. doi: 10.1128/JVI.76.11.5435-5451.2002

PMCID:: PMC137027

Abstract Article PDF–526K

Select item 13572216.

Molecular Epidemiology of Human Immunodeficiency Virus Type 1 Transmission in a Heterosexual Cohort of Discordant Couples in Zambia

Stanley A. Trask, Cynthia A. Derdeyn, Ulgen Fideli, Yalu Chen, Sreelatha Meleth, Francis Kasolo, Rosemary Musonda, Eric Hunter, Feng Gao, Susan Allen, Beatrice H. Hahn

J Virol. 2002 Jan; 76(1): 397–405. doi: 10.1128/JVI.76.1.397-405.2002

PMCID:: PMC135722

Abstract Article PDF–850K

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