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Brain Region/Organism: Basal ganglia

  1. A basal ganglia model of aberrant learning (Ursino et al. 2018)
  2. A computational model of action selection in the basal ganglia (Suryanarayana et al 2019)
  3. A contracting model of the basal ganglia (Girard et al. 2008)
  4. A dynamical model of the basal ganglia (Leblois et al 2006)
  5. A kinetic model of dopamine- and calcium-dependent striatal synaptic plasticity (Nakano et al. 2010)
  6. A large-scale model of the functioning brain (spaun) (Eliasmith et al. 2012)
  7. Activity patterns in a subthalamopallidal network of the basal ganglia model (Terman et al 2002)
  8. Basal Ganglia and Levodopa Pharmacodynamics model for parameter estimation in PD (Ursino et al 2020)
  9. Basal ganglia motor function and the inverse kinematics calculation (Salimi-Badr et al 2017)
  10. Basal Ganglia motor-circuit for kinematic planning of arm movements (Salimi-Badr et al 2017)
  11. Basal ganglia network model of subthalamic deep brain stimulation (Hahn and McIntyre 2010)
  12. Basal ganglia-corticothalamic (BGCT) network (Chen et al., 2014)
  13. Biologically Constrained Basal Ganglia model (BCBG model) (Lienard, Girard 2014)
  14. Biophysical basis of Subthalamic LFPs Recorded from DBS electrodes (Maling et al 2018)
  15. Cognitive and motor cortico-basal ganglia interactions during decision making (Guthrie et al 2013)
  16. Computational endophenotypes in addiction (Fiore et al 2018)
  17. Computational modeling of ultrasonic Subthalamic Nucleus stimulation (Tarnaud et al 2019)
  18. Control of oscillations and spontaneous firing in dopamine neurons (Rumbell & Kozloski 2019)
  19. Cortex-Basal Ganglia-Thalamus network model (Kumaravelu et al. 2016)
  20. Cortical Basal Ganglia Network Model during Closed-loop DBS (Fleming et al 2020)
  21. Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017)
  22. Cortico - Basal Ganglia Loop (Mulcahy et al 2020)
  23. Determinants of the intracellular and extracellular waveforms in DA neurons (Lopez-Jury et al 2018)
  24. Dopaminergic subtantia nigra neuron (Moubarak et al 2019)
  25. Dynamic dopamine modulation in the basal ganglia: Learning in Parkinson (Frank et al 2004,2005)
  26. Effects of Dopamine Modulation and KIR Inactivation in NAc Medium Spiny Neurons (Steephen 2011)
  27. Effects of KIR current inactivation in NAc Medium Spiny Neurons (Steephen and Manchanda 2009)
  28. Excessive beta oscillations in Parkinson's disease (Pavlides et al. 2015)
  29. Excitotoxic loss of dopaminergic cells in PD (Muddapu et al 2019)
  30. Failure of Deep Brain Stimulation in a basal ganglia neuronal network model (Dovzhenok et al. 2013)
  31. Gap junction coupled network of striatal fast spiking interneurons (Hjorth et al. 2009)
  32. Globus pallidus neuron models with differing dendritic Na channel expression (Edgerton et al., 2010)
  33. GP Neuron, somatic and dendritic phase response curves (Schultheiss et al. 2011)
  34. High frequency stimulation of the Subthalamic Nucleus (Rubin and Terman 2004)
  35. Information trans. through Entopeduncular nucleus modified by synaptic plasticity (Gorodetsky et al)
  36. Investigation of different targets in deep brain stimulation for Parkinson`s (Pirini et al. 2009)
  37. Levodopa-Induced Toxicity in Parkinson's Disease (Muddapu et al, 2022)
  38. LFP in striatum (Tanaka & Nakamura 2019)
  39. Library of biophysically detailed striatal projection neurons (Lindroos and Hellgren Kotaleski 2020)
  40. Logarithmic distributions prove that intrinsic learning is Hebbian (Scheler 2017)
  41. Mechanisms for pattern specificity of DBS in Parkinson's disease (Velarde et al 2017)
  42. Model for K-ATP mediated bursting in mSNc DA neurons (Knowlton et al 2018)
  43. Morphological determinants of action potential dynamics in substantia nigra (Moubarak et al 2022)
  44. Multiscale model of excitotoxicity in PD (Muddapu and Chakravarthy 2020)
  45. NAcc medium spiny neuron: effects of cannabinoid withdrawal (Spiga et al. 2010)
  46. Network model of movement disorders (Yousif et al 2020)
  47. Nicotinic control of dopamine release in nucleus accumbens (Maex et al. 2014)
  48. Optimal deep brain stimulation of the subthalamic nucleus-a computational study (Feng et al. 2007)
  49. Pallidostriatal projections promote beta oscillations (Corbit, Whalen, et al 2016)
  50. Parkinsonian Motor Network Model during Multivariable Closed-loop DBS (Fleming et al 2023)
  51. Phase response curve of a globus pallidal neuron (Fujita et al. 2011)
  52. Phasic dopamine changes, Hebbian mechs during reversal learning in striatum (Schirru et al in press)
  53. Population-level model of the basal ganglia and action selection (Gurney et al 2001, 2004)
  54. Regulation of firing frequency in a midbrain dopaminergic neuron model (Kuznetsova et al. 2010)
  55. Role of the AIS in the control of spontaneous frequency of dopaminergic neurons (Meza et al 2017)
  56. Signaling pathways In D1R containing striatal spiny projection neurons (Blackwell et al 2018)
  57. Single compartment Dorsal Lateral Medium Spiny Neuron w/ NMDA and AMPA (Biddell and Johnson 2013)
  58. Single-cell comprehensive biophysical model of SN pars compacta (Muddapu & Chakravarthy 2021)
  59. Speed/accuracy trade-off between the habitual and the goal-directed processes (Kermati et al. 2011)
  60. Spiking neuron model of the basal ganglia (Humphries et al 2006)
  61. Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018)
  62. Striatal Spiny Projection Neuron, inhibition enhances spatial specificity (Dorman et al 2018)
  63. Striatum D1 Striosome and Matrix Upstates (Prager et al., 2020)
  64. Study of augmented Rubin and Terman 2004 deep brain stim. model in Parkinsons (Pascual et al. 2006)
  65. TD2Q reinforcement learning (Blackwell and Doya, in press)
  66. The microcircuits of striatum in silico (Hjorth et al 2020)
  67. The STN-GPe network; subthalamic nucleus, prototypic GPe, and arkypallidal GPe neurons (Kitano 2023)
  68. VTA dopamine neuron (Tarfa, Evans, and Khaliq 2017)
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