Phasing in physicochemical features

Unlocking the electrochemical functions of biomolecular condensates

  • Yifan Dai
  • Zhen-Gang Wang
  • Richard N. Zare
Perspective

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  • Drops of dew condensing on leaves

    This themed issue presents a collection of Reviews, Perspectives and Articles that aim to reveal the molecular and chemical principles underlying phase-separated condensate formation and promote the development and use of new tools for the study of phase separation biology.

Nature Chemical Biology is a Transformative Journal; authors can publish using the traditional publishing route OR via immediate gold Open Access.

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  • An optogenetic tool called Opto-OGT has been developed that enables researchers to probe pathways involving modifications with O-linked β-N-acetylglucosamine (O-GlcNAc) such as OGT, mTOR and AMPK signaling with high spatiotemporal precision. The method is based on fusing a photosensitive cryptochrome protein to an O-GlcNAc transferase and enables OGT to be reversibly activated with blue light.

    • Qunxiang Ong
    • Ler Ting Rachel Lim
    • Xiaoyong Yang
    Article
  • Loveless, Carlson and colleagues describe peCHYRON, a DNA recorder that propagates an unending chain of insertions. Each link contains a randomizable 3-bp ‘signature’ sequence that serves to record a cellular event in the order it occurred.

    • Theresa B. Loveless
    • Courtney K. Carlson
    • Chang C. Liu
    Article
  • The sodium salts in corn stover hydrolysates have been identified as important inhibitors for cellulosic ethanol production. Adaptive evolution generated a robust yeast that converted both glucose and xylose into biofuel. Subsequent reverse engineering created a genetically defined yeast with equivalent performance to the evolved strain.

    • Yi-Wen Zhang
    • Jun-Jie Yang
    • Sheng Yang
    Article
  • A high-throughput precision oncology pipeline for pharmacotranscriptomic profiling using live-cell barcoding and single-cell RNA sequencing was developed. Using this approach revealed a drug resistance feedback loop in high-grade serous ovarian cancer, suggesting that combining phosphatidylinositol 3-OH kinase, protein kinase B and mammalian target of rapamycin inhibitors with epithelial growth factor receptor inhibitors may overcome resistance.

    • Alice Dini
    • Harlan Barker
    • Daniela Ungureanu
    ArticleOpen Access
  • A compound screen using zebrafish identified carbonic anhydrase (CA) as a modulator of tau toxicity. CA inhibition abrogates lysosomal acidification and causes tau secretion by lysosomal exocytosis without having a prion effect. This mechanism lowers intracellular tau and is neuroprotective in zebrafish and mouse models of tauopathy.

    • Ana Lopez
    • Farah H. Siddiqi
    • David C. Rubinsztein
    ArticleOpen Access
  • 1,3-Pr2-6-OTs GlcNAlk is a precursor uniquely targeting the essential glycosyltransferase MGAT1 to selectively tag hybrid N-glycan-modified proteins. Some hybrid-glycan tagged proteins move through a route from the Golgi to the nucleus/nucleolus.

    • Mana Mohan Mukherjee
    • Devin Biesbrock
    • John A. Hanover
    Article
    • Synthesis and characterization of new macrolones — fusions of two antibiotic classes with distinct bacterial targets — reveal the basis for their activity and potential design principles that may help combat development of antimicrobial resistance.

      • Mohamed I. Barmada
      • Graeme L. Conn
      News & Views
    • In May 2024, ‘Protein Degradation in Focus’, a special symposium aimed at bringing together scientists in the targeted protein degradation (TPD) field, was held in Dundee, UK. David Zollman and Kirsten McAulay report on the topics discussed and the exciting outlook for science in the TPD space.

      • David Zollman
      • Kirsten McAulay
      Meeting Report
    • The mechanism underlying the formation of crystals in cells is not completely understood. An article now reports on the biochemical control of the crystal genesis in iridophores.

      • Peter G. Vekilov
      News & Views
    • Characterization of the heterogeneity in the glycosylation of biotherapeutics is crucial for drug development but challenging. Now, an approach allows the rapid analysis of the glycosylation of intact glycoproteins, without prior processing or separation, enabling the study of glycan composition and quality assessment of any glycoprotein drug.

      • Sharon Yehuda
      • Vered Padler-Karavani
      News & Views
    • Covalent modification of cysteine by electrophilic small molecules enables broad targeting of the unliganded proteome. A study reveals that cysteine reactive electrophiles can induce widespread degradation of host proteins and remodeling of cellular proteostasis at commonly used concentrations.

      • Caroline Stanton
      • Kayla Nutsch
      • Michael J. Bollong
      News & Views

Chemical Biology of Microbiomes

Interspecies communication in complex microbiome environments occurs through the small molecules, peptides, and proteins produced by both the host and the microbial residents, as highlighted in this collection of recent articles from Nature Portfolio.
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