Abstract
This article presents methods of studying profiles of parallel programs interaction with external memory of supercomputers, based on open source software, which are monitoring resources, and the execution protocols of the parallel job management system. In the article there are provided the results of the research of users’ programs executed on supercomputer complex at the Joint Supercomputer Center of the Russian Academy of Sciences (JSCC RAS).
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REFERENCES
O. S. Aladyshev, N. I. Dikarev, A. P. Ovsyannikov, and B. M. Shabanov, ‘‘Supercomputer: Application areas and performance requirements,’’ Izv. Vyssh. Uchebn. Zaved. 1, 13–17 (2004).
O. S. Aladyshev and B. M. Shabanov, ‘‘Clustered parallel file system for high performance clusters,’’ Program. Prod. Sist. 2 (78), 8–14 (2007).
I. Panina, N. Krylov, D. Nolde, R. Efremov, and A. Chugunov, ‘‘Environmental and dynamic effects explain how nisin captures membrane-bound lipid II,’’ Sci. Rep. 10, 8821 (2020). https://doi.org/10.1038/s41598-020-65522-y
A. O. Kurbatov, N. K. Balabaev, M. A. Mazo, and E. Y. Kramarenko, ‘‘Effects of generation number, spacer length and temperature on the structure and intramolecular dynamics of siloxane dendrimer melts: Molecular dynamics simulations,’’ Soft Matter 16, 3792–3805 (2020). https://doi.org/10.1039/D0SM00095G
L. Huang, D. Walker, O. Rana, and Y. Huang, ‘‘Dynamic Workflow management using performance data,’’ in Proceedings of the 6th IEEE International Symposium on Cluster Computing and the Grid CCGRID’06, 2006, pp. 154–157. doi 10.1109/CCGRID.2006.37
E. Kiselev, ‘‘Building an information graph of a parallel program based on profiling and tracing data,’’ in Proceedings of the International Supercomputer Conference, Novorossiisk, 2011.
Ganglia Monitoring System. http://ganglia.sourceforge.net. Accessed January 28, 2021.
G. I. Savin, B. M. Shabanov, P. N. Telegin, and A. V. Baranov, ‘‘Joint supercomputer center of the Russian Academy of Sciences: Present and future,’’ Lobachevskii J. Math. 40 (11), 1853–1862 (2019). https://doi.org/10.1134/S1995080219110271
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The work was carried out at the JSCC RAS as part of the government assignment, project no. 0580-2021-0016. Supercomputer MVS-10P was used in research.
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(Submitted by A. M. Elizarov)
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Aladyshev, O.S., Kiselev, E.A., Zakharchenko, A.V. et al. Influence of External Memory Characteristics of Supercomputer Complexes on Parallel Programs Execution. Lobachevskii J Math 42, 2493–2502 (2021). https://doi.org/10.1134/S1995080221110044
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DOI: https://doi.org/10.1134/S1995080221110044