This document presents an implementation of the well-known Smith-Waterman algorithm for comparison of proteic and nucleic sequences, using specialized video ...
Abstract. Motivation: This document presents an implementation of the well-known Smith-Waterman algorithm for comparison of proteic and nucleic sequences, ...
This document presents an implementation of the well-known Smith-Waterman algorithm for comparison of proteic and nucleic sequences, using specialized video ...
This document presents an implementation of the well-known Smith-Waterman algorithm for comparison of proteic and nucleic sequences, using specialized video ...
End-to-end learning of multiple sequence alignments with ... - NCBI
www.ncbi.nlm.nih.gov › PMC9805565
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Oct 25, 2021 · First described by Wozniak et al. Using video-oriented instructions to speed up sequence comparison. (1997) https://bmcbioinformatics.
This paper presents WFA-GPU, a GPU (graphics processing unit)-accelerated tool to compute exact gap-affine alignments based on the WFA algorithm.
Using video-oriented instructions to speed up sequence comparison · Microparallelism and High-Performance Protein Matching · Searching protein sequence libraries: ...
This implementation reached a speed up close to two relative to the same algorithm implemented with integer instructions on the same machine. On the other hand, ...
Jun 1, 2010 · The Smith–Waterman algorithm is constrained by the memory access speed and can be accelerated significantly by using graphics processors (GPUs) as the compute ...