Motivation: RNA folding is a complicated kinetic process. The minimum free energy structure provides only a static view of the most stable conformational ...

This study presents the predicting algorithm based on extended structure, it also proposes an improved computing algorithm based on barrier tree and basin ...

May 13, 2020 · This study presents the predicting algorithm based on ex- tended structure, it also proposes an improved computing algorithm based on barrier ...

The Computing Algorithm of Barrier Tree Based on the Basin Hopping Graph in RNA Structure ... It is an NP-hard problem for prediction of RNA folding structure ...

Results: We introduce the Basin Hopping Graph (BHG) as a novel coarse-grained model of folding landscapes. Each vertex of the BHG is a local minimum, which ...

Oct 23, 2024 · The Improved Algorithm of Barrier Tree in RNA Folding Structure Based on Basin Hopping Graph. MDA 2019: 31-40. [c16]. no documents available.

The aim of the present study is to develop a novel ACO-based algorithm for finding the RNA folding pathway with a low energy barrier height and to evaluate its ...

Basin Hopping Graph: A computational framework to characterize RNA folding landscapes. Article. Full-text available. Mar 2014; BIOINFORMATICS.

Basin Hopping Graph: A computational framework to characterize RNA folding landscapes. SUPPLEMENTAL MATERIAL. Marcel Kucharık1, Ivo L. Hofacker1−3, Peter F ...