We propose a method for detecting rules, by which the order of elements is restricted. The order restriction is expressed as element patterns.
A method for detecting rules, by which the order of elements is restricted, is proposed, and significant patterns overlooked by previous methods are ...
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Oct 5, 2022 · Our two-step approach can accurately predict functional states in any cell/tissue type of all the CRMs in the genome using data of only 1~4 epigenetic marks.
May 28, 2024 · Here we present a new tool, REgulamentary, which enables de novo genome-wide annotation of cis-regulatory elements in a cell-type specific manner.
Identification of cis-Regulatory Elements in Gene Co-expression ...
www.ncbi.nlm.nih.gov › PMC2719765
Typically, computational methods for identifying cis-regulatory elements in promoter sequences fall into two classes, enumerative and alignment techniques (6).
Oct 23, 2024 · Here we present a platform to engineer and validate synthetic CREs capable of driving gene expression with programmed cell-type specificity.
The basic idea to use the nucleotide sequence of cis-regulatory elements to predict the activating tissues is not new (Fondrat and Kalogeropoulos, 1994).
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Abstract: The identification of cis-regulatory elements and modules is an important step in understanding the regulation of genes.
Apr 25, 2024 · One of its key mechanisms in gene regulation is the control of transcription by cis-regulatory elements (CRE), which are short DNA sequence ...
Abstract. Conventional approaches to predict transcriptional regulatory interactions usually rely on the definition of a shared motif sequence on the targe.
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