In this work, we develop a distributed memory parallelization of the Nullspace Algorithm to handle efficiently the computation of the elementary modes of a ...

In this work, we develop a distributed memory parallelization of the Nullspace Algorithm to handle efficiently the computation of the elementary modes of a ...

A novel approach to speed up the calculation of elementary flux modes by including transcriptional regulatory information into the analysis of metabolic ...

Parallelization of Nullspace Algorithm for the Computation of Metabolic Pathways by Dimitrije Jevremović, Cong T. Trinh, Friedrich Srienc, Carlos P.

Co-authors · Parallelization of nullspace algorithm for the computation of metabolic pathways · On algebraic properties of extreme pathways in metabolic networks.

Parallelization of Nullspace Algorithm for the computation of metabolic pathways. Dimitrije Jevremović, Cong T. Trinh, Friedrich Srienc, Carlos P. Sosa ...

Abstract—Elementary flux modes are an important class of metabolic pathways used to characterize the functioning and behavior of metabolic networks of ...

The improved parallel Nullspace Algorithm is used to compute up to nearly 50 million elementary flux modes for a metabolic network for yeast, a task which was ...

The improved parallel Nullspace Algorithm is used to compute up to nearly 50 million elementary flux modes for a metabolic network for yeast, a task which was ...

Jevremovic, C. Trinh, F. Srienc, D. Boley, "Parallelization of the Nullspace Algorithm for the Computation of Metabolic Pathways", Parallel Computing no. 37 ...