Sep 2, 2020 · In this paper, we study different DNA representations on the well-studied problem of Conserved Non-coding Elements (CNEs), trying to understand ...
Sep 2, 2020 · In this paper, we study different DNA representations on the well-studied problem of Conserved Non-coding Elements (CNEs), trying to understand how well ...
Sep 4, 2020 · In this paper, we study different DNA representations on the well-studied problem of Conserved Non-coding Elements (CNEs), trying to understand ...
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Nikolaos Gialitsis, George Giannakopoulos, Marina Athanasouli, Evaluation of distributed DNA representations on the classification of conserved non-coding ...
Gialitsis, N.; Giannakopoulos, G.; Athanasouli, M.: Evaluation of distributed DNA representations on the classification of conserved non-coding elements.
Mar 3, 2024 · Here we evaluate the representational power of pre-trained gLMs to predict and interpret cell-type-specific functional genomics data that span DNA and RNA ...
Binary Classification Experiments. Evaluation of distributed DNA representations on the classification of conserved non-coding elements. Conference Paper. Full ...
Here we present the analysis of CNEs with a methodology that takes into account word occurrence at various lengths scales in the form of feature vector ...
Apr 2, 2024 · We show that CNEs evolve repeatedly around the same genes across the Metazoa, including around homeodomain genes and other transcription factors.
This paper proposes a novel method to train distributed representations of variable-length k-mers based on the popular word embedding model word2vec, ...