May 4, 2022 · This paper proposes DSIM, a scalable FM-Index querying on near-DRAM accelerators. DSIM supports highly parallel multi-step query processing.
Jun 13, 2022 · DSIM supports highly parallel multi-step query processing by distributing partial FM-Index table to different DRAM chips. Each genome sequence ...
This paper proposes DSIM, a scalable FM-Index querying on near-DRAM accelerators. DSIM supports highly parallel multi-step query processing by distributing ...
Matching nucleic acid sequences has long become the performance bottleneck in genome assembly which aims to connect enormous partial genome reads without ...
DSIM: Distributed Sequence Matching on Near-DRAM Accelerator for Genome Assembly · Published: 31 Dec 2021, Last Modified: 12 Nov 2023 · IEEE J. Emerg. Sel. Topics ...
This paper proposes DSIM, a scalable FM-Index querying on near-DRAM accelerators. DSIM supports highly parallel multi-step query processing by distributing ...
Nov 25, 2021 · MiDSystem is a comprehensive online system for analyzing genomic data from microbiomes. With a user-friendly interface, MiDSystem supports both de novo ...
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2022-5 Our work, "DSIM: Distributed Sequence Matching on Near-DRAM Accelerator for Genome Assembly" is accepted by JETCAS 2022. 2022-1 Our work, "A Highly P ...
Nov 6, 2024 · The alignment of these reads into a complete DNA sequence of an organism (the read mapping process) requires extensive data transfer between ...
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In this paper we propose the accelerator-interposed memory (AIM) as a means of scalable and noninvasive near-memory acceleration. To avoid the high memory ...