Jun 29, 2023 · DSDP is an integrated docking program developed for blind docking, which can also be used for redocking and virtual screening. To compare DSDP ...
Mar 16, 2023 · In this study, we take the advantage of both traditional and machine-learning based methods, and present a method Deep Site and Docking Pose (DSDP) to improve ...
The docking task of DSDP makes use of the score function and a similar but modified searching strategy of AutoDock Vina, accelerated by implementation in GPUs.
DSDP is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, several modifications are introduced to PUResNet ...
Mar 16, 2023 · A method, deep site and docking pose (DSDP), to improve the performance of blind docking and systematically compare its performance in ...
Sep 9, 2024 · In contract, DSDP can predict the binding site of proteins and provide an accurate searching space and initial positions for the further ...
Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, several modifications ...
The sampling task of DSDP makes use of the score function and a similar but modified searching strategy of AutoDock Vina, accelerated by implementation in GPUs.
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In this study, we take the advantage of both traditional and machine-learning based methods, and present a method Deep Site and Docking Pose (DSDP) to improve ...