Bio-ontologies fulfill two central functions for the biological domain—first, they “clarify scientific discussions” by providing the vocabulary and terms under—and with which—such discussions take place, and second, they enable data discovery across distributed data resources (Blake, 2004, p 773).
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Ontologies in bioinformatics cover a wide range of usages and representation styles. Bioinformatics offers an exciting application area in which the community ...
Results: EDAM is an ontology of bioinformatics operations (tool or workflow functions), types of data and identifiers, application domains and data formats.
Mar 1, 2004 · This article reviews the principal bio-ontologies and the current issues in their design and development.
An ontology describes the categories of objects described in a body of data, the relationships between those objects, and the relationships between those ...
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They show how to construct and use ontologies, classifying uses into three categories: querying, viewing, and transforming data to serve diverse purposes.
The Gene Ontology (GO) is a major bioinformatics initiative to unify the representation of gene and gene product attributes across all species.
Apr 10, 2015 · Ontologies provide metadata associated with classes and relations that allows human users to understand their meaning and contribute to ...
Oct 22, 2024 · This paper describes the rapid accumulation of biological data, its various organizational structures, and the role that ontologies play in interoperability.
Dec 11, 2023 · Foundational ontologies are used for several purposes: ontology construction, repair, mapping, and ontology-based data analysis.