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{{Short description|Class of chemical compounds; yellow, orange or red plant pigments}}
[[File:Beta-Carotin.svg|thumb|Chemical structure of β-[[carotene]], a common natural pigment.|420px]]
[[File:Aerial image of Grand Prismatic Spring (view from the south).jpg|thumb|The orange ring surrounding [[Grand Prismatic Spring]] is due to carotenoids produced by [[cyanobacteria]] and other [[bacteria]].]]▼
'''Carotenoids''' ({{IPAc-en|k|ə|ˈ|r|ɒ|t|ɪ|n|ɔɪ|d}}) are yellow, orange, and red [[organic compound|organic]] [[pigment]]s that are produced by [[plant]]s and [[algae]], as well as several bacteria, archaea, and [[Fungus|fungi]].<ref>{{Lehninger4th}}</ref> Carotenoids give the characteristic color to [[pumpkin]]s, [[carrot]]s, [[parsnip]]s, [[maize|corn]], [[tomato]]es, [[Domestic Canary|canaries]], [[flamingo]]s, [[salmon]], [[lobster]], [[shrimp]], and [[daffodil]]s. Over 1,100
All are [[derivative (chemistry)|derivatives]] of [[tetraterpene]]s, meaning that they are produced from 8 [[isoprene]] units and contain 40 carbon atoms. In general, carotenoids absorb wavelengths ranging from 400 to 550 nanometers (violet to green light). This causes the compounds to be deeply colored yellow, orange, or red. Carotenoids are the dominant pigment in [[autumn
[[File:Updated graphic 24.2.16.png|thumb|Macular pigments of the human eye]]
Carotenoids serve two key roles in plants and algae: they absorb light energy for use in [[photosynthesis]], and they provide [[photoprotection]] via [[non-photochemical quenching]].<ref>{{cite journal |vauthors=Armstrong GA, Hearst JE |title=Carotenoids 2: Genetics and molecular biology of carotenoid pigment biosynthesis |journal=FASEB J. |volume=10 |issue=2 |pages=228–37 |year=1996 |pmid=8641556 |doi= 10.1096/fasebj.10.2.8641556|doi-access=free |s2cid=22385652 |url=http://www.fasebj.org/cgi/pmidlookup?view=long&pmid=8641556}}</ref> Carotenoids that contain unsubstituted beta-ionone rings (including [[β-carotene]], [[α-carotene]], [[β-cryptoxanthin]], and [[γ-carotene]]) have [[vitamin A]] activity (meaning that they can be converted to [[retinol]]). In the eye, [[lutein]], [[Meso-Zeaxanthin|''meso''-zeaxanthin]], and [[zeaxanthin]] are present as [[macula|macular pigment]]s whose importance in visual function, as of 2016, remains under [[clinical research]].<ref name=lpi/><ref name="Li">{{cite journal|pmc=4698241|year=2015|last1=Bernstein|first1=P. S.|title=Lutein, Zeaxanthin, and meso-Zeaxanthin: The Basic and Clinical Science Underlying Carotenoid-based Nutritional Interventions against Ocular Disease|journal=Progress in Retinal and Eye Research|volume=50|pages=34–66|last2=Li|first2=B|last3=Vachali|first3=P. P.|last4=Gorusupudi|first4=A|last5=Shyam|first5=R|last6=Henriksen|first6=B. S.|last7=Nolan|first7=J. M.|doi=10.1016/j.preteyeres.2015.10.003|pmid=26541886}}</ref>
== Structure and function ==
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[[File:72 - gac.jpg|thumb|[[Gac]] fruit, rich in lycopene]]
[[File:Akita Omoriyama Zoo - panoramio.jpg|thumb|Ingesting carotenoid-rich foods affects the [[plumage]] of [[flamingo]]s.]]
[[File:Luteine - Lutein.svg|thumb|385px|[[Lutein]], a [[Xanthophyll]].]]
Carotenoids are produced by all photosynthetic organisms and are primarily used as [[
They are highly [[Unsaturated hydrocarbon|unsaturated]] with [[Conjugated system|conjugated double bonds]], which enables carotenoids to absorb light of various [[
Most carotenoids are [[tetraterpenoids]], regular <chem>C40</chem> [[isoprenoids]]. Several modifications to these structures exist: including [[Cyclic compound|cyclization]], varying degrees of [[Saturated fat|saturation]] or unsaturation, and other [[functional group]]s.<ref name="Maresca-2008">{{Cite journal |
Carotenoids also participate in different types of cell signaling.<ref name="Cogdell-1978">{{Cite journal|last=Cogdell|first=R. J.|date=1978-11-30|title=Carotenoids in photosynthesis|journal=Phil. Trans. R. Soc. Lond. B|language=en|volume=284|issue=1002|pages=569–579|doi=10.1098/rstb.1978.0090|bibcode=1978RSPTB.284..569C|issn=0080-4622}}</ref> They are able to signal the production of [[abscisic acid]], which regulates plant growth, [[seed dormancy]], embryo maturation and [[germination]], [[cell division]] and elongation, floral growth, and stress responses.<ref>{{Cite journal|last=Finkelstein|first=Ruth|date=2013-11-01|title=Abscisic Acid Synthesis and Response|journal=The Arabidopsis Book
===Photophysics===
The length of the multiple [[Conjugated system|conjugated double bonds]] determines their color and photophysics.<ref name=":2">{{Cite journal|last=Vershinin|first=Alexander|date=1999-01-01|title=Biological functions of carotenoids - diversity and evolution|journal=BioFactors|language=en|volume=10|issue=2–3|pages=99–104|doi=10.1002/biof.5520100203|pmid=10609869|s2cid=24408277|issn=1872-8081}}</ref><ref>{{cite journal |doi=10.1021/cr020674n |title=Ultrafast Dynamics of Carotenoid Excited States−From Solution to Natural and Artificial Systems |year=2004 |last1=Polívka |first1=Tomáš |last2=Sundström |first2=Villy |journal=Chemical Reviews |volume=104 |issue=4 |pages=2021–2072 |pmid=15080720 }}</ref> After absorbing a photon, the carotenoid transfers its excited electron to [[chlorophyll]] for use in photosynthesis.<ref name=":2" /> Upon absorption of light, carotenoids transfer excitation energy to and from [[chlorophyll]]. The singlet-singlet energy transfer is a lower energy state transfer and is used during photosynthesis.<ref name="
Carotenoids defend plants against [[singlet oxygen]], by both energy transfer and by chemical reactions. They also protect plants by quenching triplet chlorophyll.<ref>{{cite journal |doi=10.1104/pp.111.182394 |title=Chemical Quenching of Singlet Oxygen by Carotenoids in Plants |year=2012 |last1=Ramel |first1=Fanny |last2=Birtic |first2=Simona |last3=Cuiné |first3=Stéphan |last4=Triantaphylidès |first4=Christian |last5=Ravanat |first5=Jean-Luc |last6=Havaux |first6=Michel |journal=Plant Physiology |volume=158 |issue=3 |pages=1267–1278 |pmid=22234998 |pmc=3291260 }}</ref> By protecting lipids from free-radical damage, which generate charged [[Lipid peroxidation|lipid peroxides]] and other oxidised derivatives, carotenoids support crystalline architecture and hydrophobicity of lipoproteins and cellular lipid structures, hence oxygen solubility and its diffusion therein.<ref>{{Cite book|url=https://www.worldcat.org/oclc/148650411|title=Carotenoids: physical, chemical, and biological functions and properties|date=2010|publisher=CRC Press|author=John Thomas Landrum|isbn=978-1-4200-5230-5|location=Boca Raton|oclc=148650411}}</ref>
===Structure-property relationships===
Like some [[fatty acid]]s, carotenoids are [[lipophilic]] due to the presence of long [[Saturated and unsaturated compounds|unsaturated]] [[aliphatic]] chains.<ref name=lpi/> As a consequence, carotenoids are typically present in plasma [[lipoprotein]]s and cellular lipid structures.<ref>{{Citation|last=Gruszecki|first=Wieslaw I.|title=Carotenoids in Membranes|date=2004|url=http://link.springer.com/10.1007/0-306-48209-6_20|work=The Photochemistry of Carotenoids|series=Advances in Photosynthesis and Respiration|volume=8|pages=363–379|editor-last=Frank|editor-first=Harry A.|place=Dordrecht|publisher=Kluwer Academic Publishers|language=en|doi=10.1007/0-306-48209-6_20|isbn=978-0-7923-5942-5|access-date=2021-03-28|editor2-last=Young|editor2-first=Andrew J.|editor3-last=Britton|editor3-first=George|editor4-last=Cogdell|editor4-first=Richard J.}}</ref>
▲Carotenoids also participate in different types of cell signaling.<ref name="Cogdell-1978" /> They are able to signal the production of [[abscisic acid]], which regulates plant growth, [[seed dormancy]], embryo maturation and [[germination]], [[cell division]] and elongation, floral growth, and stress responses.<ref>{{Cite journal|last=Finkelstein|first=Ruth|date=2013-11-01|title=Abscisic Acid Synthesis and Response|journal=The Arabidopsis Book / American Society of Plant Biologists|volume=11|doi=10.1199/tab.0166|issn=1543-8120|pmc=3833200|pmid=24273463|page=e0166}}</ref>
== Morphology ==
Carotenoids are located primarily outside the [[cell nucleus]] in different cytoplasm organelles, [[lipid droplet]]s, [[Microbody|cytosomes]] and granules. They have been visualised and quantified by [[raman spectroscopy]] in an [[algal]] cell.<ref>{{Citation|last1=Timlin|first1=Jerilyn A.|title=Localizing and Quantifying Carotenoids in Intact Cells and Tissues|date=2017-06-14
With the development of [[Monoclonal antibody|monoclonal antibodies]] to ''trans-''[[lycopene]] it was possible to localise this carotenoid in different animal and human cells.
▲[[File:Aerial image of Grand Prismatic Spring (view from the south).jpg|thumb|The orange ring surrounding [[Grand Prismatic Spring]] is due to carotenoids produced by [[cyanobacteria]] and other [[bacteria]].]]
==Foods==
[[Beta-carotene]], found in [[pumpkin]]s, [[sweet potato]], [[carrot]]s and [[winter squash]], is responsible for their orange-yellow colors.<ref name=lpi/> Dried carrots have the highest amount of carotene of any food per 100-gram serving, measured in retinol activity equivalents (provitamin A equivalents).<ref name="lpi">{{cite web|publisher=Micronutrient Information Center, Linus Pauling Institute, Oregon State University|url=http://lpi.oregonstate.edu/infocenter/phytochemicals/carotenoids/|title=Carotenoids| date=1 August 2016|access-date=17 April 2019}}</ref><ref>{{Cite web|title = Foods Highest in Retinol Activity Equivalent|url = http://nutritiondata.self.com/foods-000100000000000000000-w.html|website = nutritiondata.self.com|access-date = 2015-12-04}}</ref> Vietnamese [[gac]] fruit contains the highest known concentration of the carotenoid [[lycopene]].<ref>{{cite journal|pmc=4779482|year=2015|last1=Tran|first1=X. T.|title=Effects of maturity on physicochemical properties of Gac fruit (Momordica cochinchinensis Spreng.)|journal=Food Science & Nutrition|volume=4|issue=2|pages=305–314|last2=Parks|first2=S. E.|last3=Roach|first3=P. D.|last4=Golding|first4=J. B.|last5=Nguyen|first5=M. H.|doi=10.1002/fsn3.291|pmid=27004120}}</ref> Although green, [[kale]], [[spinach]], [[collard greens]], and [[turnip greens]] contain substantial amounts of beta-carotene.<ref name=lpi/> The diet of [[flamingo]]s is rich in carotenoids, imparting the orange-colored feathers of these birds.<ref>{{cite journal|pmc=4639753|year=2015|last1=Yim|first1=K. J.|title=Occurrence of viable, red-pigmented haloarchaea in the plumage of captive flamingoes|journal=Scientific Reports|volume=5|pages=16425|last2=Kwon|first2=J|last3=Cha|first3=I. T.|last4=Oh|first4=K. S.|last5=Song|first5=H. S.|last6=Lee|first6=H. W.|last7=Rhee|first7=J. K.|last8=Song|first8=E. J.|last9=Rho|first9=J. R.|last10=Seo|first10=M. L.|last11=Choi|first11=J. S.|last12=Choi|first12=H. J.|last13=Lee|first13=S. J.|last14=Nam|first14=Y. D.|last15=Roh|first15=S. W.|doi=10.1038/srep16425|pmid=26553382|bibcode=2015NatSR...516425Y}}</ref>
Humans and other [[animal]]s are mostly incapable of synthesizing carotenoids, and must obtain them through their diet. Carotenoids are a common and often ornamental feature in animals. For example, the pink color of [[salmon]], and the red coloring of cooked [[lobster]]s and scales of the yellow morph of [[common wall lizard]]s are due to carotenoids.<ref>{{Cite journal|title = Colour variation in the polymorphic common wall lizard (Podarcis muralis): An analysis using the RGB colour system|last = Sacchi|first = Roberto|date = 4 June 2013|journal = Zoologischer Anzeiger|volume = 252|issue = 4|pages = 431–439|doi = 10.1016/j.jcz.2013.03.001| bibcode=2013ZooAn.252..431S }}</ref>{{citation needed|date=December 2015}} It has been proposed that carotenoids are used in ornamental traits (for extreme examples see [[puffin]] birds) because, given their physiological and chemical properties, they can be used as visible indicators of individual health, and hence are used by animals when selecting potential mates.<ref>{{cite journal|journal=Evol Psychol|year=2012|volume=10|issue=5|pages=842–54|title=Attractive skin coloration: harnessing sexual selection to improve diet and health|vauthors=Whitehead RD, Ozakinci G, Perrett DI|pmid=23253790|doi=10.1177/147470491201000507|s2cid=8655801|doi-access=free|pmc=10429994}}</ref>
Carotenoids from the diet are stored in the fatty tissues of animals,<ref name=lpi/> and exclusively [[Carnivore|carnivorous]] animals obtain the compounds from animal fat. In the human diet, [[Small intestine#Absorption|absorption]] of carotenoids is improved when consumed with fat in a meal.<ref name="jfst">{{cite journal | last1=Mashurabad | first1=Purna Chandra | last2=Palika | first2=Ravindranadh | last3=Jyrwa | first3=Yvette Wilda | last4=Bhaskarachary | first4=K. | last5=Pullakhandam | first5=Raghu | title=Dietary fat composition, food matrix and relative polarity modulate the micellarization and intestinal uptake of carotenoids from vegetables and fruits | journal=Journal of Food Science and Technology | volume=54 | issue=2 | date=3 January 2017 | issn=0022-1155 | doi=10.1007/s13197-016-2466-7 | pages=333–341|pmid=28242932|pmc=5306026}}</ref> Cooking carotenoid-containing vegetables in oil and shredding the vegetable both increase carotenoid [[bioavailability]].<ref name=lpi/><ref name=jfst/><ref>{{cite journal |last1=Rodrigo |first1=María Jesús |last2=Cilla |first2=Antonio |last3=Barberá |first3=Reyes |last4=Zacarías |first4=Lorenzo |title=Carotenoid bioaccessibility in pulp and fresh juice from carotenoid-rich sweet oranges and mandarins |journal=Food & Function |date=2015 |volume=6 |issue=6 |pages=1950–1959 |doi=10.1039/c5fo00258c |pmid=25996796}}</ref>
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== Bird colors and sexual selection ==
Dietary carotenoids and their metabolic derivatives are responsible for bright yellow to red coloration in birds.<ref>{{Cite journal|last1=Delhey|first1=Kaspar|last2=Peters|first2=Anne|date=2016-11-16|title=The effect of
These differences arise due to the selection of yellow and red coloration in males by [[Mate choice|female preference]].<ref>{{Cite journal|last=Hill|first=Geoffrey E.|date=September 1990|title=Female house finches prefer colourful males: sexual selection for a condition-dependent trait|url=http://dx.doi.org/10.1016/s0003-3472(05)80537-8|journal=Animal Behaviour|volume=40|issue=3|pages=563–572|doi=10.1016/s0003-3472(05)80537-8|s2cid=53176725|issn=0003-3472}}</ref><ref name="Cooney-2019" /> In many species of birds, females invest greater time and resources into raising offspring than their male partners. Therefore, it is imperative that female birds carefully select high quality mates. Current literature supports the theory that vibrant carotenoid coloration is correlated with male quality—either though direct effects on immune function and oxidative stress,<ref>{{Cite journal|last1=Weaver|first1=Ryan J.|last2=Santos|first2=Eduardo S. A.|last3=Tucker|first3=Anna M.|last4=Wilson|first4=Alan E.|last5=Hill|first5=Geoffrey E.|date=2018-01-08|title=Carotenoid metabolism strengthens the link between feather coloration and individual quality|url=http://dx.doi.org/10.1038/s41467-017-02649-z|journal=Nature Communications|volume=9|issue=1|page=73|doi=10.1038/s41467-017-02649-z|pmid=29311592|pmc=5758789|bibcode=2018NatCo...9...73W |issn=2041-1723}}</ref><ref>{{Cite journal|last1=Simons|first1=Mirre J. P.|last2=Cohen|first2=Alan A.|last3=Verhulst|first3=Simon|date=2012-08-14|title=What Does Carotenoid-Dependent Coloration Tell? Plasma Carotenoid Level Signals Immunocompetence and Oxidative Stress State in Birds–A Meta-Analysis|journal=PLOS ONE|volume=7|issue=8|pages=e43088| pmid=22905205|doi=10.1371/journal.pone.0043088|pmc=3419220|bibcode=2012PLoSO...743088S |issn=1932-6203|doi-access=free}}</ref><ref>{{Cite journal|last1=Koch|first1=Rebecca E.|last2=Hill|first2=Geoffrey E.|date=2018-05-14|title=Do
It is generally considered that sexually selected traits, such as carotenoid-based coloration, evolve because they are honest signals of phenotypic and genetic quality. For instance, among males of the bird species ''[[great tit|Parus major]]'', the more colorfully ornamented males produce sperm that is better protected against [[oxidative stress]] due to increased presence of carotenoid [[antioxidant]]s.<ref>{{Cite journal |last1=Helfenstein |first1=Fabrice |last2=Losdat |first2=Sylvain |last3=Møller |first3=Anders Pape |last4=Blount |first4=Jonathan D. |last5=Richner |first5=Heinz |date=February 2010 |title=Sperm of colourful males are better protected against oxidative stress
▲It is generally considered that sexually selected traits, such as carotenoid-based coloration, evolve because they are honest signals of phenotypic and genetic quality. For instance, among males of the bird species ''[[great tit|Parus major]]'', the more colorfully ornamented males produce sperm that is better protected against [[oxidative stress]] due to increased presence of carotenoid [[antioxidant]]s.<ref>{{Cite journal |last1=Helfenstein |first1=Fabrice |last2=Losdat |first2=Sylvain |last3=Møller |first3=Anders Pape |last4=Blount |first4=Jonathan D. |last5=Richner |first5=Heinz |date=February 2010 |title=Sperm of colourful males are better protected against oxidative stress |url=https://pubmed.ncbi.nlm.nih.gov/20059524 |journal=Ecology Letters |volume=13 |issue=2 |pages=213–222 |doi=10.1111/j.1461-0248.2009.01419.x |issn=1461-0248 |pmid=20059524}}</ref> However, there is also evidence that attractive male coloration may be a faulty signal of male quality. Among [[stickleback]] fish, males that are more attractive to females due to carotenoid colorants appear to under-allocate carotenoids to their germline cells.<ref name="Kim2020">{{Cite journal |last1=Kim |first1=Sin-Yeon |last2=Velando |first2=Alberto |date=January 2020 |title=Attractive male sticklebacks carry more oxidative DNA damage in the soma and germline |url=https://pubmed.ncbi.nlm.nih.gov/31610052 |journal=Journal of Evolutionary Biology |volume=33 |issue=1 |pages=121–126 |doi=10.1111/jeb.13552 |issn=1420-9101 |pmid=31610052|s2cid=204702365 }}</ref> Since carotinoids are beneficial antioxidants, their under-allocation to [[germline]] cells can lead to increased oxidative [[DNA damage (naturally occurring)|DNA damage]] to these cells.<ref name = Kim2020/> Therefore, female sticklebacks may risk [[fertility]] and the viability of their offspring by choosing redder, but more deteriorated partners with reduced [[sperm]] quality.
==Aroma chemicals==
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== Biosynthesis ==
[[File:Carotenoid synthetic pathway.svg|thumb|Pathway of carotenoid synthesis]]
The basic building blocks of carotenoids are [[Isopentenyl pyrophosphate|isopentenyl diphosphate]] (IPP) and [[Dimethylallyl pyrophosphate|dimethylallyl diphosphate]] (DMAPP).<ref name="Nisar-2015">{{Cite journal|last1=Nisar|first1=Nazia|last2=Li|first2=Li|last3=Lu|first3=Shan|last4=Khin|first4=Nay Chi|last5=Pogson|first5=Barry J.|date=2015-01-05|title=Carotenoid Metabolism in Plants|journal=Molecular Plant|series=Plant Metabolism and Synthetic Biology|volume=8|issue=1|pages=68–82|doi=10.1016/j.molp.2014.12.007|pmid=25578273|s2cid=26818009 |doi-access=free}}</ref> These two isoprene isomers are used to create various compounds depending on the biological pathway used to synthesize the isomers.<ref name="Kuzuyama-2012">{{Cite journal|last1=KUZUYAMA|first1=Tomohisa|last2=SETO|first2=Haruo|date=2012-03-09|title=Two distinct pathways for essential metabolic precursors for isoprenoid biosynthesis|journal=Proceedings of the Japan Academy. Series B, Physical and Biological Sciences|volume=88|issue=3|pages=41–52|doi=10.2183/pjab.88.41|issn=0386-2208|pmc=3365244|pmid=22450534|bibcode=2012PJAB...88...41K}}</ref> Plants are known to use two different pathways for IPP production: the cytosolic [[mevalonic acid]] pathway (MVA) and the plastidic [[Non-mevalonate pathway|methylerythritol 4-phosphate]] (MEP).<ref name="Nisar-2015" /> In animals, the production of [[cholesterol]] starts by creating IPP and DMAPP using the MVA.<ref name="Kuzuyama-2012" /> For carotenoid production plants use MEP to generate IPP and DMAPP.<ref name="Nisar-2015" /> The MEP pathway results in a 5:1 mixture of IPP:DMAPP.<ref name="Kuzuyama-2012" /> IPP and DMAPP undergo several reactions, resulting in the major carotenoid precursor, [[geranylgeranyl diphosphate]] (GGPP). GGPP can be converted into carotenes or xanthophylls by undergoing a number of different steps within the carotenoid biosynthetic pathway.<ref name="Nisar-2015" />
=== MEP pathway ===
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=== Regulation ===
It is believed that both DXS and DXR are rate-determining enzymes, allowing them to regulate carotenoid levels.<ref name="Nisar-2015" /> This was discovered in an experiment where DXS and DXR were genetically overexpressed, leading to increased carotenoid expression in the resulting seedlings.<ref name="Nisar-2015" /> Also, J-protein (J20) and heat shock protein 70 (Hsp70) chaperones are thought to be involved in post-transcriptional regulation of DXS activity, such that mutants with defective J20 activity exhibit reduced DXS enzyme activity while accumulating inactive DXS protein.<ref>{{cite journal|last1=Nisar|first1=Nazia|last2=Li|first2=Li|last3=Lu|first3=Shan|last4=ChiKhin|first4=Nay|last5=Pogson|first5=Barry J.|title=Carotenoid Metabolism in Plants|journal=Molecular Plant|date=5 January 2015|volume=8|issue=1|pages=68–82|doi=10.1016/j.molp.2014.12.007|pmid=25578273|s2cid=26818009 |doi-access=free}}</ref> Regulation may also be caused by external [[toxin]]s that affect enzymes and proteins required for synthesis. Ketoclomazone is derived from [[herbicide]]s applied to soil and binds to DXP synthase.<ref name="Kuzuyama-2012" /> This inhibits DXP synthase, preventing synthesis of DXP and halting the MEP pathway.<ref name="Kuzuyama-2012" /> The use of this toxin leads to lower levels of carotenoids in plants grown in the contaminated soil.<ref name="Kuzuyama-2012" /> [[Fosmidomycin]], an [[Antibiotics|antibiotic]], is a [[Competitive inhibition|competitive inhibitor]] of DXP reductoisomerase due to its similar structure to the enzyme.<ref name="Kuzuyama-2012" /> Application of said antibiotic prevents reduction of DXP, again halting the MEP pathway. <ref name="Kuzuyama-2012" />
==Naturally occurring carotenoids==
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* [[E number#E100–E199 (colours)]]
* [[Phytochemistry]]
==References==
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==External links==
{{commons category|Carotenoids}}
* {{MeshName|Carotenoids}}
|