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Updated to reflect the changes made to "plasmid DNA extraction".
Change plasmids to plasmid so the section now reads as "plasmid DNA extraction"
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## Plant mitochondrial plasmids
## Plant mitochondrial plasmids
# Study of Plasmids
# Study of Plasmids
## Plasmids DNA Extraction
## Plasmid DNA Extraction
### Added other options for DNA extraction and provided a link for one of the options that I had included
### Added other options for DNA extraction and provided a link for one of the options that I had included
#### Added: DNA Bacterial extraction kits (but not the methods provided in the parenthesis[[Plasmid preparation#Preparations by size|)]], DNA gel recovery kits, [[alkaline lysis]], enzymatic lysis, and mechanical lysis
#### Added: DNA Bacterial extraction kits (but not the methods provided in the parenthesis[[Plasmid preparation#Preparations by size|)]], DNA gel recovery kits, [[alkaline lysis]], enzymatic lysis, and mechanical lysis

Revision as of 16:16, 18 October 2024

You will be compiling your bibliography and creating an outline of the changes you will make in this sandbox.


Bibliography

  • Smillie, Chris; Garcillán-Barcia, M. Pilar; Francia, M. Victoria; Rocha, Eduardo P. C.; de la Cruz, Fernando (2010-09). "Mobility of Plasmids". Microbiology and Molecular Biology Reviews
    • Citation added that shows the importance of antibiotic resistance and virulence
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11123730/
    • Information regarding use of plasmids and BGC
  • https://www.nature.com/articles/s41467-022-32858-0
    • BGC and relation to host
  • https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8557879/
    • Information of using plasmids as having BGC
  • Hayes F (2003). "Chapter 1 – The Function and Organization of Plasmids". In Casali N, Presto A (eds.). E. Coli Plasmid Vectors: Methods and Applications. Methods in Molecular Biology. Vol. 235. Humana Press. pp. 1–5. ISBN 978-1-58829-151-6.
    • Citation was added to the history of plasmids. Helps demonstrate the impact plasmids use for transferable genetic elements.

References

Outline of proposed changes

  1. Plasmids
    1. Added details
      1. Virulence
    2. Links
      1. Linked Virulence
    3. Citation
      1. Smillie, Chris; Garcillán-Barcia, M. Pilar; Francia, M. Victoria; Rocha, Eduardo P. C.; de la Cruz, Fernando (2010-09). "Mobility of Plasmids". Microbiology and Molecular Biology Reviews
  2. History Section
    1. Added details
      1. Changed "introduce" to coined and added a citation.
  3. Properties and Characteristics Section
  4. Classifications and Types Section
    1. RNA Plasmids
      1. Check citations
      2. Create Links
      3. Copyedit
    2. Chromids
      1. Check citations
      2. Create Links
      3. Copyedit
  5. Vectors Section
    1. Cloning
    2. Protein production
      1. Modified Protein production to Biogenetic Gene Clusters and Proteins
      2. Added a new main section
        1. Biogenetic gene clusters
      3. Updated section to reflect BGC relation to proteins
      4. Added citation
        1. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11123730/
    3. Gene Therapy
    4. Disease Models
  6. Episomes Section
  7. Plasmid Maintenance Section
  8. Plasmids in Nature
    1. Yeast Plasmids
    2. Plant mitochondrial plasmids
  9. Study of Plasmids
    1. Plasmid DNA Extraction
      1. Added other options for DNA extraction and provided a link for one of the options that I had included
        1. Added: DNA Bacterial extraction kits (but not the methods provided in the parenthesis), DNA gel recovery kits, alkaline lysis, enzymatic lysis, and mechanical lysis
          1. Provided a link for alkaline lysis.
    2. Conformations
    3. Software for Bioinformatics and Design
    4. Plasmid Collections