Export Citations
Save this search
Please login to be able to save your searches and receive alerts for new content matching your search criteria.
- ArticleJune 2009
A New Method for Mapping Short DNA Sequencing Reads by Using Quality Scores
OCCBIO '09: Proceedings of the 2009 Ohio Collaborative Conference on BioinformaticsPages 21–25https://doi.org/10.1109/OCCBIO.2009.35New high-throughput sequencing technologies can generate millions of short DNA sequences that need to be mapped to the reference genome accurately. Majority of the mapping algorithms handle variations in the quality of these short sequences by allowing ...
- ArticleJune 2009
Beyond Identity- When Classical Homology Searching Fails, Why, and What you Can do About It
OCCBIO '09: Proceedings of the 2009 Ohio Collaborative Conference on BioinformaticsPages 51–56https://doi.org/10.1109/OCCBIO.2009.23Multiple Sequence Alignments of both protein and nucleic-acid sequences are a ubiquitous method for modeling sequence families that pervades every biological domain. Despite their utility, MSAs and methods derived from them fail to capture ...
- ArticleApril 2009
A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments
- Hatice Gulcin Ozer,
- Doruk Bozdağ,
- Terry Camerlengo,
- Jiejun Wu,
- Yi-Wen Huang,
- Tim Hartley,
- Jeffrey D. Parvin,
- Tim Huang,
- Umit V. Catalyurek,
- Kun Huang
BICoB '09: Proceedings of the 1st International Conference on Bioinformatics and Computational BiologyPages 320–330https://doi.org/10.1007/978-3-642-00727-9_30ChIP-sequencing is a new technique for generating short DNA sequences useful in analyzing DNA-protein interactions and carrying out genome-wide studies. Although there are some studies to process and analyze ChIP-sequencing data, a complete workflow has ...