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- research-articleNovember 2024
Development of a novel representation of drug 3D structures and enhancement of the TSR-based method for probing drug and target interactions
- Tarikul I. Milon,
- Yuhong Wang,
- Ryan L. Fontenot,
- Poorya Khajouie,
- Francois Villinger,
- Vijay Raghavan,
- Wu Xu
Computational Biology and Chemistry (COBC), Volume 112, Issue Chttps://doi.org/10.1016/j.compbiolchem.2024.108117AbstractUnderstanding the mechanisms underlying interactions between drugs and target proteins is critical for drug discovery. In our earlier studies, we introduced the Triangular Spatial Relationship (TSR)-based algorithm, which enables the ...
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Highlights- A new approach to representing ligand and drug 3D structures is introduced and evaluated.
- A novel algorithm calculating cross TSR keys is developed for enabling comparisons of drug/ligand - target complexes.
- The results demonstrate ...
- research-articleJuly 2024
An innovative information accumulation multivariable grey model and its application in China's renewable energy generation forecasting
Expert Systems with Applications: An International Journal (EXWA), Volume 252, Issue PAhttps://doi.org/10.1016/j.eswa.2024.124130AbstractReducing greenhouse gas emissions is urgent for the global community with rising climates. Considering the importance of renewable energy in mitigating climate warming, forecasting renewable energy generation is vital for the Chinese government's ...
- research-articleAugust 2024
Joint Motion Tracking of Basketball Shooting Action based on Smart Conductive Fabric Sensors
ISCER '24: Proceedings of the 2024 3rd International Symposium on Control Engineering and RoboticsPages 200–204https://doi.org/10.1145/3679409.3679448Human motion tracking is of great significance for sports training and rehabilitation treatment. Wearable sensors are the preferred device for motion detection, but they often have characteristics such as high cost and poor wearing comfort. In order to ...
- research-articleApril 2024
Forecasting China’s total renewable energy capacity using a novel dynamic fractional order discrete grey model
Expert Systems with Applications: An International Journal (EXWA), Volume 239, Issue Chttps://doi.org/10.1016/j.eswa.2023.122019AbstractAccurately forecasting renewable energy capacity is crucial for informing national energy policies and promoting sustainable socio-economic growth. This study proposes a novel dynamic fractional-order discrete grey model (DFDGM (1,1)) for ...
- research-articleJuly 2024
A Bayesian network learning method for sparse and unbalanced data with GNN-based multilabel classification application
AbstractCreating a well-defined Bayesian network (BN) is helpful for developing effective graph neural networks (GNNs) that exploit annotated labels in multilabel classification (MLC) tasks. Obtaining correct BNs can be challenging when the labels are ...
Highlights- Creating Bayesian networks is useful for developing effective graph neural networks
- Obtaining Bayesian networks is challenging when data are unbalanced and sparse
- A novel Bayesian scoring method is proposed to address data ...
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- research-articleOctober 2023
Temporal Perceiver: A General Architecture for Arbitrary Boundary Detection
IEEE Transactions on Pattern Analysis and Machine Intelligence (ITPM), Volume 45, Issue 10Pages 12506–12520https://doi.org/10.1109/TPAMI.2023.3283067Generic Boundary Detection (GBD) aims at locating the general boundaries that divide videos into semantically coherent and taxonomy-free units, and could serve as an important pre-processing step for long-form video understanding. Previous works often ...
- research-articleJuly 2023
An improved GM(1,1) forecasting model based on Aquila Optimizer for wind power generation in Sichuan Province
Soft Computing - A Fusion of Foundations, Methodologies and Applications (SOFC), Volume 28, Issue 15-16Pages 8785–8805https://doi.org/10.1007/s00500-023-09007-wAbstractWith the rapid development of China's economy, wind resource development has important practical significance for alleviating environmental pollution problems in China. As China's clean energy province and western economic center, Sichuan's wind ...
- research-articleMay 2023
An optimal aggregation method for interval grey numbers using on Steiner-Weber point with application
Computers and Industrial Engineering (CINE), Volume 179, Issue Chttps://doi.org/10.1016/j.cie.2023.109156AbstractAiming at the problem of low accuracy of two-dimensional preference information aggregation, this paper takes two-dimensional interval grey numbers as an example to define its preference information mapping rules. This rule maps preference ...
- research-articleDecember 2022
Enhancement of DNN-based multilabel classification by grouping labels based on data imbalance and label correlation
Highlights- DNN-based MLC suffers two critical problems: data imbalance and label correlation
Multilabel classification (MLC) is a challenging task in real-world applications, such as project document classification which led us to conduct this research. In the past decade, deep neural networks (DNNs) have been explored in MLC ...
- research-articleOctober 2022
Combination Strategy Standard Recommendation Algorithm for Standard Information System
ICCSIE '22: Proceedings of the 7th International Conference on Cyber Security and Information EngineeringPages 968–971https://doi.org/10.1145/3558819.3565226To fulfill the standard recommendation requirements of the enterprise's standard information system, this paper proposes a combination strategy standard recommendation algorithm, which is based on factors such as standard name, standard classification ...
- research-articleJuly 2022
Automatic labeling of river restoration project documents based on project objectives and restoration methods
Expert Systems with Applications: An International Journal (EXWA), Volume 197, Issue Chttps://doi.org/10.1016/j.eswa.2022.116754Highlights- Machine-learning methods are developed to label river restoration project documents.
River restoration projects are widely implemented around the world. Such projects are usually complicated endeavors. Engineering, environmental, and social impacts must be considered under various constraints. Gaining lessons from ...
- research-articleJanuary 2022
An improved software defect prediction model based on grey incidence analysis and Naive Bayes algorithm
Journal of Intelligent & Fuzzy Systems: Applications in Engineering and Technology (JIFS), Volume 43, Issue 5Pages 6047–6060https://doi.org/10.3233/JIFS-213570This paper aims to improve the accuracy of software defect prediction by using a prediction model based on grey incidence analysis and Naive Bayes algorithm. The model employs the Naïve Bayes as the basic classifier of the software defect prediction ...
- research-articleJanuary 2022
Research on the optimal aggregation method of fuzzy preference information based on spatial Steiner-Weber point
Journal of Intelligent & Fuzzy Systems: Applications in Engineering and Technology (JIFS), Volume 42, Issue 3Pages 2755–2773https://doi.org/10.3233/JIFS-211913In view of the present situation that most aggregation methods of fuzzy preference information are extended or mixed by classical aggregation operators, which leads to the aggregation accuracy is not high. The purpose of this paper is to develop a novel ...
- research-articleJanuary 2022
The Interaction between Public Environmental Art Sculpture and Environment Based on the Analysis of Spatial Environment Characteristics
The interaction with the public and the coordinated change with the environment are more important in public environmental art sculpture. To be more accessible to the public, public environmental art sculptures should be integrated with the environment ...
- research-articleJanuary 2022
Research on the spatial optimal aggregation method of decision maker preference information based on Steiner-Weber point
Computers and Industrial Engineering (CINE), Volume 163, Issue Chttps://doi.org/10.1016/j.cie.2021.107819Highlights- Propose the spatial optimal aggregation method for decision maker preference.
- Construct the spatial optimal aggregation model based on the Steiner-Weber point.
- Develop a novel MADM method based on the proposed aggregation method.
The purpose of this paper is to provide a novel approach for the spatial aggregation of decision maker preference information. The optimal aggregation method of decision maker preference information based on spatial Steiner-Weber point can ...
- research-articleDecember 2021
Cross-efficiency intervals integrated ranking approach based on the generalized Fermat-Torricelli point
Computers and Industrial Engineering (CINE), Volume 162, Issue Chttps://doi.org/10.1016/j.cie.2021.107786Highlights- Propose a new integrated ranking approach for DEA cross-efficiency.
- Adopt ...
As a significant extension of data envelopment analysis studies, cross-efficiency has been commenly adopted to rank the performances of decision-making units (DMUs). Interval cross-efficiency techniques can solve the nonuniqueness ...
- research-articleFebruary 2020
Sparsity adaptive matching pursuit for face recognition
Journal of Visual Communication and Image Representation (JVCIR), Volume 67, Issue Chttps://doi.org/10.1016/j.jvcir.2020.102764Highlights- A two-phase representation method is presented to improve classification accuracy.
Sparse representation methods have exhibited promising performance for pattern recognition. However, these methods largely rely on the data sparsity available in advance and are usually sensitive to noise in the training samples. To ...
- short-paperSeptember 2019
SMILES-BERT: Large Scale Unsupervised Pre-Training for Molecular Property Prediction
BCB '19: Proceedings of the 10th ACM International Conference on Bioinformatics, Computational Biology and Health InformaticsPages 429–436https://doi.org/10.1145/3307339.3342186With the rapid progress of AI in both academia and industry, Deep Learning has been widely introduced into various areas in drug discovery to accelerate its pace and cut R&D costs. Among all the problems in drug discovery, molecular property prediction ...
- research-articleMarch 2019
An improved grey group decision-making approach
Applied Soft Computing (APSC), Volume 76, Issue CPages 78–88https://doi.org/10.1016/j.asoc.2018.12.010AbstractIn complex group decision-making, decision makers and decision attributes are the core of the relevant activities. Targeting the problem of scheme ranking and behavioural characteristics that exist in group decision-making, from the ...
Highlights- Construct a two-step optimization model to solve for the group consensus ideal scheme and its measure value matrix.
- research-articleOctober 2018
Seq3seq fingerprint: towards end-to-end semi-supervised deep drug discovery
ACM SIGBioinformatics Record (SIGBIO), Volume 8, Issue 1Article No.: 1, Pages 1–10https://doi.org/10.1145/3284959.3284960Observing the recent progress in Deep Learning, the employment of AI is surging to accelerate drug discovery and cut R&D costs in the last few years. However, the success of deep learning is attributed to large-scale clean high-quality labeled data, ...