A Granulation Tissue Detection Model to Track Chronic Wound Healing in DM Foot Ulcers
<p>Network architecture. (<b>a</b>) This model inspects each 32 × 32 sub-image individually on the wound picture. The detection results in one of three classes: granulation tissues, non-granulation tissues, and non-wound areas. (<b>b</b>) The ResNet18 network model we used in this research is reduced to 1/4 of the original size. We can thus save the computing resources and avoid the overfitting problem.</p> "> Figure 2
<p>Three rounds of active learning. In the first round, we collected samples from three classes by drawing bounding boxes and generating 32 × 32 blocks for experts to label. We trained the model using the first set of images and applied it to detect images in the second set. When we colored the output classes with green, red, and yellow, respectively, misclassified samples could be easily relabeled and inserted into the dataset in the second round. We increased classes 1, 2, and 3 samples by 1933, 7327, and 211,397, respectively, resulting in more accurate detections before round 3. In the final round of resampling, we continued to collect misclassified samples from the third set of images. Finally, we used all samples in the dataset for model training.</p> "> Figure 3
<p>Case 1, a 65-year-old male patient. Although the IOU rate was around 0.6, the detection results precisely indicate the location and area of granulation tissues after the second and third training sessions.</p> "> Figure 4
<p>Case 2 of a 68-year-old male patient with poor DM control. The healing process was also accurately traced by our granulation detection model. However, the wound area near the heel was incorrectly classified from class 2 (non-granulation tissues) to class 3 (non-wound areas) after the third training session. This situation did not affect our detection for class 1 (granulation tissues).</p> "> Figure 5
<p>Case 3 of a 59-year-old female patient with a history of DM for over 15 years. Our detection model can accurately track the wound appearance on the surface but was unable to discover the putrescence occurring deeply behind the skin. Therefore, advance warning could not be given to prevent the occurrence of the toe amputation.</p> "> Figure 6
<p>Comparison of cases 1-2 and 2-3 images. (<b>a</b>) Both granulation tissue and non-granulation tissue are clearly textured with image resolution at 150 dpi. (<b>b</b>) The texture of both is relatively flat and approximates the appearance of class 3, as the image resolution of this case is 300 dpi.</p> "> Figure 7
<p>Other factors that cause misclassification. (<b>a</b>) Wetter tissue is more likely to reflect light when photographed, thereby affecting the detection model. (<b>b</b>) In more complex wounds, granulation is not easily correctly detected due to mixing with other tissues.</p> ">
Abstract
:1. Introduction
2. Materials and Methods
2.1. The Data Source
2.2. Institutional Review Board Statement
2.3. Our Detection Model
2.4. Data Sampling and Active Learning
3. Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Jones, K.R.; Fennie, K.; Lenihan, A. Evidence-based management of chronic wounds. Adv. Ski. Wound Care 2007, 20, 591–600. [Google Scholar] [CrossRef] [PubMed]
- Dissemond, J.; Assenheimer, B.; Engels, P.; Gerber, V.; Kröger, K.; Kurz, P.; Läuchli, S.; Probst, S.; Protz, K.; Traber, J.; et al. M.O.I.S.T.—A concept for the topical treatment of chronic wounds. J. Ger. Soc. Dermatol. JDDG. 2017, 15, 443–445. [Google Scholar] [CrossRef] [PubMed]
- Alhajj, M.; Goyal, A. Physiology, Granulation Tissue; StatPearls Publishing: Treasure Island, FL, USA, 2021. Available online: https://www.ncbi.nlm.nih.gov/books/NBK554402/ (accessed on 30 October 2021).
- Chakraborty, C. Computational approach for chronic wound tissue characterization. Inform. Med. Unlocked 2019, 17, 100162. [Google Scholar] [CrossRef]
- Thompson, N.; Gordey, L.; Bowles, H.; Parslow, N.; Houghton, P. Reliability and validity of the revised photographic wound assessment tool on digital images taken of various types of chronic wounds. Adv. Ski. Wound Care 2013, 26, 360–373. [Google Scholar] [CrossRef] [PubMed]
- Yazdanpanah, L.; Nasiri, M.; Adarvishi, S. Literature review on the management of diabetic foot ulcer. World J. Diabetes 2015, 6, 37–53. [Google Scholar] [CrossRef] [PubMed]
- Van Doremalen, R.F.M.; Van Netten, J.J.; Van Baal, J.G.; Vollenbroek-Hutten, M.M.R.; van der Heijden, F. Validation of low-cost smartphone-based thermal camera for diabetic foot assessment. Diabetes Res Clin Pract 2019, 149, 132–139. [Google Scholar] [CrossRef] [PubMed]
- Boulton, A.J.; Vileikyte, L.; Ragnarson-Tennvall, G.; Apelqvist, J. The global burden of diabetic foot disease. Lancet 2005, 366, 1719–1724. [Google Scholar] [CrossRef]
- Vas, P.R.; Edmonds, M.E. Approach to a new diabetic foot ulceration. Foot Diabetes 2020, 481–493. [Google Scholar] [CrossRef]
- Rayman, G.; Vas, P.; Dhatariya, K.; Driver, V.; Hartemann, A.; Londahl, M.; Piaggesi, A.; Apelqvist, J.; Attinger, C.; Game, F. International Working Group on the Diabetic Foot (IWGDF). Guidelines on use of interventions to enhance healing of chronic foot ulcers in diabetes (IWGDF 2019 update). Diabetes/Metab. Res. Rev. 2020, 36, e3283. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Wang, L.; Pedersen, P.C.; Strong, D.M.; Tulu, B.; Agu, E.; Ignotz, R.; He, Q. An automatic assessment system of diabetic foot ulcers based on wound area determination, color segmentation, and healing score evaluation. J. Diabetes Sci. Technol. 2016, 10, 421–428. [Google Scholar] [CrossRef] [PubMed]
- Chan, K.S.; Lo, Z.J. Wound assessment, imaging and monitoring systems in diabetic foot ulcers: A systematic review. Int. Wound J. 2020, 17, 1909–1923. [Google Scholar] [CrossRef] [PubMed]
- van Netten, J.J.; Clark, D.; Lazzarini, P.A.; Janda, M.; Reed, L.F. The validity and reliability of remote diabetic foot ulcer assessment using mobile phone images. Sci. Rep. 2017, 7, 9480. [Google Scholar] [CrossRef] [PubMed]
- Hamaguchi, R.; Hikosaka, S. Building detection from satellite imagery using ensemble of size-specific detector. In Proceedings of the 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops (CVPRW), Salt Lake, UT, USA, 18–23 June 2018; pp. 223–2234. [Google Scholar]
- He, K.; Zhang, X.; Ren, S.; Sun, J. Deep residual learning for image recognition. In Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), Las Vegas, NV, USA, 26–30 June 2016; pp. 770–778. [Google Scholar]
- Ronneberger, O.; Fischer, P.; Brox, T. U-net: Convolutional networks for biomedical image segmentation. In Medical Image Computing and Computer-Assisted Intervention—MICCAI 2015; Navab, N., Hornegger, J., Wells, W.M., Frangi, A.F., Eds.; Springer International Publishing: Berlin/Heidelberg, Germany, 2015; pp. 234–241. [Google Scholar]
- Isensee, F.; Petersen, J.; Klein, A.; Zimmerer, D.; Jaeger, P.F.; Kohl, S.; Wasserthal, J.; Koehler, G.; Norajitra, T.; Wirkert, S.; et al. NNU-net: Self-Adapting Framework for u-net-based Medical Image segmentation. Available online: https://arxiv.org/abs/1809.10486 (accessed on 19 January 2022).
- He, K.; Gkioxari, G.; Dollar, P.; Girshick, R. Mask R-CNN. In Proceedings of the 2017 IEEE International Conference on Computer Vision (ICCV), Venice, Italy, 22–29 October 2017; pp. 2980–2988. [Google Scholar] [CrossRef]
- Zhang, Q.; Chang, X.; Bian, S.B. Vehicle-Damage-Detection Segmentation Algorithm Based on Improved Mask RCNN. IEEE Access 2020, 8, 6997–7004. [Google Scholar] [CrossRef]
- Krizhevsky, A.; Sutskever, I.; Hinton, G.E. Imagenet classification with deep convolutional neural networks. In Advances in Neural Information Processing Systems; Pereira, F., Burges, C., Bottou, L., Weinberger, K., Eds.; Curran Associates, Inc: San Jose, CA, USA, 2012; Volume 25, pp. 1097–1105. [Google Scholar]
- Chen, L.C.; Zhu, Y.; Papandreou, G.; Schroff, F.; Adam, H. Encoder-Decoder with Atrous Separable Convolution for Semantic Image Segmentation. In Proceedings of the European Conference on Computer Vision (ECCV), Munich, Germany, 8–14 September 2018; pp. 801–818. [Google Scholar]
- Chakraborty, S.; Balasubramanian, V.; Panchanathan, S. Adaptive Batch Mode Active Learning. IEEE Trans. Neural Networks Learn. Syst. 2015, 16, 1747–1760. [Google Scholar] [CrossRef] [PubMed]
- Wu, F.Z. Comparing Active Learning with Random Selection when Building Predictive Models. In Proceedings of the 4th International Conference on Intelligent Robotics and Control Engineering (IRCE), Lanzhou, China, 18–20 September 2021; pp. 114–119. [Google Scholar] [CrossRef]
1st Round | 2nd Round | 3rd Round | Total | |||||
---|---|---|---|---|---|---|---|---|
#images #samples | #images #samples | #images #samples | #images #samples | |||||
class 1 | 52 | 1349 | 78 | 1933 | 80 | 10253 | 210 | 13535 |
class 2 | 1011 | 7327 | 3152 | 11490 | ||||
class 3 | 1020 | 211397 | 133 | 212550 |
IOU | |||
---|---|---|---|
Case | 1st Round | 2nd Round | 3rd Round |
Case 1-1 | 0.31 | 0.57 | 0.59 |
Case 1-2 | 0.42 | 0.61 | 0.68 |
Case 1-3 | 0.24 | 0.51 | 0.58 |
Case 2-1 | 0.11 | 0.5 | 0.51 |
Case 2-2 | 0.31 | 0.51 | 0.68 |
Case 2-3 | 0.11 | 0.39 | 0.45 |
Case 3-1 | 0.37 | 0.61 | 0.68 |
Case 3-2 | 0.46 | 0.65 | 0.72 |
Case 3-3 | 0.39 | 0.62 | 0.68 |
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations. |
© 2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Lien, A.S.-Y.; Lai, C.-Y.; Wei, J.-D.; Yang, H.-M.; Yeh, J.-T.; Tai, H.-C. A Granulation Tissue Detection Model to Track Chronic Wound Healing in DM Foot Ulcers. Electronics 2022, 11, 2617. https://doi.org/10.3390/electronics11162617
Lien AS-Y, Lai C-Y, Wei J-D, Yang H-M, Yeh J-T, Tai H-C. A Granulation Tissue Detection Model to Track Chronic Wound Healing in DM Foot Ulcers. Electronics. 2022; 11(16):2617. https://doi.org/10.3390/electronics11162617
Chicago/Turabian StyleLien, Angela Shin-Yu, Chen-Yao Lai, Jyh-Da Wei, Hui-Mei Yang, Jiun-Ting Yeh, and Hao-Chih Tai. 2022. "A Granulation Tissue Detection Model to Track Chronic Wound Healing in DM Foot Ulcers" Electronics 11, no. 16: 2617. https://doi.org/10.3390/electronics11162617
APA StyleLien, A. S. -Y., Lai, C. -Y., Wei, J. -D., Yang, H. -M., Yeh, J. -T., & Tai, H. -C. (2022). A Granulation Tissue Detection Model to Track Chronic Wound Healing in DM Foot Ulcers. Electronics, 11(16), 2617. https://doi.org/10.3390/electronics11162617