Abstract
Ground-glass opacity (GGO) is a common CT imaging sign on high-resolution CT, which means the lesion is more likely to be malignant compared to common solid lung nodules. The automatic recognition of GGO CT imaging signs is of great importance for early diagnosis and possible cure of lung cancers. The present GGO recognition methods employ traditional low-level features and system performance improves slowly. Considering the high-performance of CNN model in computer vision field, we proposed an automatic recognition method of 3D GGO CT imaging signs through the fusion of hybrid resampling and layer-wise fine-tuning CNN models in this paper. Our hybrid resampling is performed on multi-views and multi-receptive fields, which reduces the risk of missing small or large GGOs by adopting representative sampling panels and processing GGOs with multiple scales simultaneously. The layer-wise fine-tuning strategy has the ability to obtain the optimal fine-tuning model. Multi-CNN models fusion strategy obtains better performance than any single trained model. We evaluated our method on the GGO nodule samples in publicly available LIDC-IDRI dataset of chest CT scans. The experimental results show that our method yields excellent results with 96.64% sensitivity, 71.43% specificity, and 0.83 F1 score. Our method is a promising approach to apply deep learning method to computer-aided analysis of specific CT imaging signs with insufficient labeled images.
Similar content being viewed by others
References
Aoki T, Tomoda Y, Watanabe H, Nakata H, Kasai T, Hashimoto H, Kodate M, Osaki T, Yasumoto K (2001) Peripheral lung adenocarcinoma: correlation of thin-section CT findings with histologic prognostic factors and survival. Radiology 220(3):803–809
Armato SG III, McLennan G, McNitt-Gray MF, Meyer CR, Yankelevitz D et al (2004) Lung image database consortium: developing a resource for the medical imaging research community 1. Radiology 232(3):739–748
Armato SG III, McLennan G, Bidaut L, McNitt-Gray MF, Meyer CR et al (2011) The lung image database consortium, (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans. Med Phys 38(2):915–931
Battista G, Sassi C, Zompatori M, Palmarini D, Canini R (2003) Ground-glass opacity: interpretation of high resolution CT findings. Radiol Med 106(5–6):425–442 quiz 443-424
Cheng J-Z, Ni D, Chou Y-H, Qin J, Tiu C-M, Chang YC, Huang CS, Shen D, Chen CM (2016) Computer-aided diagnosis with deep learning architecture: applications to breast lesions in US images and pulmonary nodules in CT scans. Sci Rep 6:24454
Cichy RM, Khosla A, Pantazis D, Torralba A, Oliva A (2016) Comparison of deep neural networks to spatio-temporal cortical dynamics of human visual object recognition reveals hierarchical correspondence. Sci Rep 6:27755
Ciompi F, de Hoop B, van Riel SJ, Chung K, Scholten ET, Oudkerk M, de Jong PA, Prokop M, Ginneken B (2015) Automatic classification of pulmonary peri-fissural nodules in computed tomography using an ensemble of 2D views and a convolutional neural network out-of-the-box. Med Image Anal 26(1):195–202
de Vos BD, Wolterink JM, de Jong PA, Leiner T, Viergever MA, Isgum I (2017) ConvNet-based localization of anatomical structures in 3-D medical images. IEEE Trans Med Imaging 36(7):1470–1481
Dou Q, Chen H, Yu L, Qin J, Heng PA (2016) Multi-level contextual 3D CNNs for false positive reduction in pulmonary nodule detection. IEEE Trans Biomed Eng 64(7):1558–1567
Frangi A.F. (2001) Three-dimensional model-based analysis of vascular and cardiac images
Frangi AF, Niessen WJ, Vincken KL, Viergever MA (1998) Multiscale vessel enhancement filtering. In: International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, pp 130–137
Han G, Liu X, Soomro NQ, sun J, Zhao Y et al (2017) Empirical driven automatic detection of lobulation imaging signs in lung CT. BioMed Res Int 2017:3842659 15 pages
Hansell DM, Bankier AA, MacMahon H, McLoud TC, Müller NL, Remy J (2008) Fleischner society: glossary of terms for thoracic imaging. Radiology 246(3):697–722
Hounsfield G (1980) Computed medical imaging. Science 210(4465):22–28
Krizhevsky A (2009) Learning multiple layers of features from tiny images. Toronto, Canada: Toronto
Linying L, Xiabi L, Chunwu Z, Xinming Z, Yanfeng Z (2017) A review of ground glass opacity detection methods in lung CT images. Current Medical Imaging Reviews 13(1):20–31
Manniesing R, Niessen W (2005) Multiscale vessel enhancing diffusion in CT angiography noise filtering. In: Biennial International Conference on Information Processing in Medical Imaging. Springer, pp 138–149
Otsu N (1979) A threshold selection method from gray-level histograms. IEEE Transactions on Systems, Man, and Cybernetics 9(1):62–66
Setio AA, Jacobs C, Gelderblom J, van Ginneken B (2015) Automatic detection of large pulmonary solid nodules in thoracic CT images. Med Phys 42(10):5642–5653
Setio AAA, Ciompi F, Litjens G, Gerke P, Jacobs C, van Riel SJ, Wille MMW, Naqibullah M, Sanchez CI, van Ginneken B (2016) Pulmonary nodule detection in CT images: false positive reduction using multi-view convolutional networks. IEEE Trans Med Imaging 35(5):1160–1169
Shin H-C, Roth HR, Gao M, Lu L, Xu Z et al (2016) Deep convolutional neural networks for computer-aided detection: CNN architectures, dataset characteristics and transfer learning. IEEE Trans Med Imaging 35:1285–1298
Song Y, Cai W, Zhou Y, Feng DD (2013) Feature-based image patch approximation for lung tissue classification. IEEE Trans Med Imaging 32(4):797–808
Song Y, Cai W, Huang H, Zhou Y, Feng DD, Wang Y, Fulham MJ, Chen M (2015) Large margin local estimate with applications to medical image classification. IEEE Trans Med Imaging 34(6):1362–1377
Sun W, Zheng B, Qian W (2016) Computer aided lung cancer diagnosis with deep learning algorithms. Medical Imaging 2016, pp. 97850Z-97850Z-97858
Tajbakhsh N, Shin JY, Gurudu SR, Hurst RT, Kendall CB, Gotway MB, Liang J (2016) Convolutional neural networks for medical image analysis: full training or fine tuning? IEEE Trans Med Imaging 35(5):1299–1312
Wood DE, Leard LE, Reddy C, Kazerooni E, Leung ANC et al (2014) NCCN clinical practice guidelines in oncology: lung cancer screening (Version 2.2014). J Natl Compr Cancer Netw
Yang Z-G, Sone S, Takashima S, Li F, Honda T, Maruyama Y, Hasegawa M, Kawakami S (2001) High-resolution CT analysis of small peripheral lung adenocarcinomas revealed on screening helical CT. Am J Roentgenol 176(6):1399–1407
Funding
The study has been supported by National Natural Science Foundation of China (60973059 and 81171407), Program for New Century Excellent Talents in University (NCET-10-0044).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare that they have no conflicts of interest.
Rights and permissions
About this article
Cite this article
Han, G., Liu, X., Zheng, G. et al. Automatic recognition of 3D GGO CT imaging signs through the fusion of hybrid resampling and layer-wise fine-tuning CNNs. Med Biol Eng Comput 56, 2201–2212 (2018). https://doi.org/10.1007/s11517-018-1850-z
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11517-018-1850-z