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DiaKG: An Annotated Diabetes Dataset for Medical Knowledge Graph Construction

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Knowledge Graph and Semantic Computing: Knowledge Graph Empowers New Infrastructure Construction (CCKS 2021)

Abstract

Knowledge Graph has been proven effective in modeling structured information and conceptual knowledge, especially in the medical domain. However, the lack of high-quality annotated corpora remains a crucial problem for advancing the research and applications on this task. In order to accelerate the research for domain-specific knowledge graphs in the medical domain, we introduce DiaKG, a high-quality Chinese dataset for Diabetes knowledge graph, which contains 22,050 entities and 6,890 relations in total. We implement recent typical methods for Named Entity Recognition and Relation Extraction as a benchmark to evaluate the proposed dataset thoroughly. Empirical results show that the DiaKG is challenging for most existing methods and further analysis is conducted to discuss future research direction for improvements. We hope the release of this dataset can assist the construction of diabetes knowledge graphs and facilitate AI-based applications.

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Notes

  1. 1.

    https://duguang.aliyun.com/.

  2. 2.

    https://github.com/changdejie/diaKG-code.

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Acknowledgments

We want to express gratitude to the anonymous reviewers for their hard work and kind comments. We also thank Tianchi Platform to host DiaKG.

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Correspondence to Dejie Chang .

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Chang, D. et al. (2021). DiaKG: An Annotated Diabetes Dataset for Medical Knowledge Graph Construction. In: Qin, B., Jin, Z., Wang, H., Pan, J., Liu, Y., An, B. (eds) Knowledge Graph and Semantic Computing: Knowledge Graph Empowers New Infrastructure Construction. CCKS 2021. Communications in Computer and Information Science, vol 1466. Springer, Singapore. https://doi.org/10.1007/978-981-16-6471-7_26

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  • DOI: https://doi.org/10.1007/978-981-16-6471-7_26

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  • Publisher Name: Springer, Singapore

  • Print ISBN: 978-981-16-6470-0

  • Online ISBN: 978-981-16-6471-7

  • eBook Packages: Computer ScienceComputer Science (R0)

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