Abstract
This study introduces a novel event-based model for disease progression. The model describes disease progression as a series of events. An event can consist of a significant change in symptoms or in tissue. We construct a forward model that relates heterogeneous measurements from a whole cohort of patients and controls to the event sequence and fit the model with a Bayesian estimation framework. The model does not rely on a priori classification of patients and therefore has the potential to describe disease progression in much greater detail than previous approaches. We demonstrate our model on serial T1 MRI data from a familial Alzheimer’s disease cohort. We show progression of neuronal atrophy on a much finer level than previous studies, while confirming progression patterns from pathological studies, and integrate clinical events into the model.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
Similar content being viewed by others
References
Braak, H., Braak, E.: Neuropathological stageing of Alzheimer-related changes. Acta Neuropathologica 82(4), 239–259 (1991)
Carbone, P., Kaplan, H., Musshoff, K., Smithers, D., Tubiana, M.: Report of the committee on Hodgkin’s disease staging classification. Cancer Research 31(11), 1860 (1971)
Dempster, A., Laird, N., Rubin, D., et al.: Maximum likelihood from incomplete data via the EM algorithm. Journal of the Royal Statistical Society. Series B (Methodological) 39(1), 1–38 (1977)
Dickerson, B., Bakkour, A., Salat, D., Feczko, E., Pacheco, J., Greve, D., Grodstein, F., Wright, C., Blacker, D., Rosas, H., et al.: The cortical signature of Alzheimer’s disease: regionally specific cortical thinning relates to symptom severity in very mild to mild AD dementia and is detectable in asymptomatic amyloid-positive individuals. Cerebral Cortex 19(3), 497 (2009)
Fischl, B., Salat, D., Busa, E., Albert, M., Dieterich, M., Haselgrove, C., van der Kouwe, A., Killiany, R., Kennedy, D., Klaveness, S., et al.: Whole Brain Segmentation: Automated Labeling of Neuroanatomical Structures in the Human Brain. Neuron 33(3), 341–355 (2002)
Fischl, B., Van Der Kouwe, A., Destrieux, C., Halgren, E., Segonne, F., Salat, D., Busa, E., Seidman, L., Goldstein, J., Kennedy, D., et al.: Automatically parcellating the human cerebral cortex. Cerebral Cortex 14(1), 11 (2004)
Folstein, M.F., Folstein, S.E., McHugh, P.R.: Mini-mental state. A practical method for grading the cognitive state of patients for the clinician. Journal of Psychiatric Research 12(3), 189 (1975)
Freeborough, P., Fox, N.: Modeling brain deformations in Alzheimer disease by fluid registration of serial 3D MR images. Journal of Computer Assisted Tomography 22(5), 838 (1998)
Gilks, W.R., Richardson, S., Spiegelhalter, D.J.: Markov chain Monte Carlo in practice. Chapman & Hall/CRC (1996)
Mannila, H., Meek, C.: Global partial orders from sequential data. In: Proceedings of the Sixth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, p. 168. ACM, New York (2000)
McLachlan, G., Peel, D.: Finite mixture models. Wiley Interscience, Hoboken (2000)
Modat, M., Ridgway, G., Taylor, Z., Lehmann, M., Barnes, J., Hawkes, D., Fox, N., Ourselin, S.: Fast free-form deformation using graphics processing units. Computer methods and programs in biomedicine 98(3), 278–284 (2010)
Mueller, S., Weiner, M., Thal, L., Petersen, R., Jack, C., Jagust, W., Trojanowski, J., Toga, A., Beckett, L.: Ways toward an early diagnosis in Alzheimer’s disease: the Alzheimer’s Disease Neuroimaging Initiative (ADNI). Alzheimer’s and Dementia: The Journal of the Alzheimer’s Association 1(1), 55–66 (2005)
Puolamaki, K., Fortelius, M., Mannila, H.: Seriation in paleontological data using Markov chain Monte Carlo methods. PLoS Computational Biology 2(2), e6 (2006)
Ridha, B.H., Barnes, J., Bartlett, J.W., Godbolt, A., Pepple, T., Rossor, M.N., Fox, N.C.: Tracking atrophy progression in familial Alzheimer’s disease: a serial MRI study. The Lancet Neurology 5(10), 828–834 (2006)
Scahill, R.I., Schott, J.M., Stevens, J.M., Rossor, M.N., Fox, N.C.: Mapping the evolution of regional atrophy in Alzheimer’s disease: unbiased analysis of fluid-registered serial MRI. Proceedings of the National Academy of Sciences of the United States of America 99(7), 4703 (2002)
Tabrizi, S., Langbehn, D., Leavitt, B., Roos, R., Durr, A., Craufurd, D., Kennard, C., Hicks, S., Fox, N., Scahill, R., et al.: Biological and clinical manifestations of Huntington’s disease in the longitudinal TRACK-HD study: cross-sectional analysis of baseline data. The Lancet Neurology 8(9), 791–801 (2009)
Thompson, P., Mega, M., Woods, R., Zoumalan, C., Lindshield, C., Blanton, R., Moussai, J., Holmes, C., Cummings, J., Toga, A.: Cortical change in Alzheimer’s disease detected with a disease-specific population-based brain atlas. Cerebral Cortex 11(1), 1 (2001)
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2011 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Fonteijn, H.M. et al. (2011). An Event-Based Disease Progression Model and Its Application to Familial Alzheimer’s Disease. In: Székely, G., Hahn, H.K. (eds) Information Processing in Medical Imaging. IPMI 2011. Lecture Notes in Computer Science, vol 6801. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-22092-0_61
Download citation
DOI: https://doi.org/10.1007/978-3-642-22092-0_61
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-22091-3
Online ISBN: 978-3-642-22092-0
eBook Packages: Computer ScienceComputer Science (R0)