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FluidTracks

Combining Nonlinear Image Registration and Active Contours for Cell Tracking

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Bildverarbeitung für die Medizin 2012

Part of the book series: Informatik aktuell ((INFORMAT))

Abstract

Continuous analysis of multi-cellular systems at the single cell level in space and time is one of the fundamental tools in cell biology and experimental medicine to study the mechanisms underlying tissue formation, regeneration and disease progression. We present an approach to cell tracking using nonlinear image registration and level set segmentation that can handle different cell densities, occlusions and cell divisions.

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Author information

Authors and Affiliations

  1. Institute for Medical Informatics and Biometry, Dresden University of Technology, Dresden, Deutschland

    Nico Scherf, Christian Ludborzs, Konstantin Thierbach, Ingmar Glauche & Ingo Roeder

  2. Interdisciplinary Centre for Bioinformatics, University of Leipzig, Leipzig, Deutschland

    Nico Scherf, Christian Ludborzs, Jens-Peer Kuska, Ulf-Dietrich Braumann & Patrick Scheibe

  3. Translational Centre for Regenerative Medicine, University of Leipzig, Leipzig, Deutschland

    Patrick Scheibe

  4. Institute for Biochemistry, University of Leipzig, Leipzig, Deutschland

    Tilo Pompe

Authors
  1. Nico Scherf
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  2. Christian Ludborzs
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  3. Konstantin Thierbach
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  4. Jens-Peer Kuska
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  5. Ulf-Dietrich Braumann
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  6. Patrick Scheibe
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  7. Tilo Pompe
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  8. Ingmar Glauche
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  9. Ingo Roeder
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Corresponding author

Correspondence to Nico Scherf .

Editor information

Editors and Affiliations

  1. Charité Campus Benjamin Franklin, Inst. Medizinische Informatik,, Universitätsklinikum Berlin, Hindenburgdamm 30, Berlin, 12200, Berlin, Germany

    Thomas Tolxdorff

  2. Inst. Medizinische Informatik, RWTH Aachen, Pauwelsstr. 30, Aachen, 52074, Germany

    Thomas Martin Deserno

  3. , Institut für Medizinische Informatik, Universität zu Lübeck, Ratzeburger Allee 160, Lübeck, 23562, Germany

    Heinz Handels

  4. Abt. Med./Biol.Inform./H0100, Deutsches Krebsforschungzentrum (DKFZ), Im Neuenheimer Feld 280, Heidelberg, 69120, Germany

    Hans-Peter Meinzer

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© 2012 Springer-Verlag Berlin Heidelberg

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Scherf, N. et al. (2012). FluidTracks. In: Tolxdorff, T., Deserno, T., Handels, H., Meinzer, HP. (eds) Bildverarbeitung für die Medizin 2012. Informatik aktuell. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-28502-8_12

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