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Advances in Conceptual Modeling - Foundations and Applications

ER 2007 Workshops CMLSA, FP-UML, ONISW, QoIS, RIGiM, SeCoGIS, Auckland, New Zealand, November 5-9, 2007, Proceedings

  • Conference proceedings
  • © 2007

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Editors:
  1. Jean-Luc Hainaut
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  2. Elke A. Rundensteiner
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  3. Markus Kirchberg
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  4. Michela Bertolotto
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  5. Mathias Brochhausen
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  6. Yi-Ping Phoebe Chen
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  7. Samira Si-Saïd Cherfi
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  8. Martin Doerr
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  9. Hyoil Han
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  10. Sven Hartmann
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  11. Jeffrey Parsons
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  12. Geert Poels
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  13. Colette Rolland
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  14. Juan Trujillo
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  15. Eric Yu
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  16. Esteban Zimányie
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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 4802)

Part of the book sub series: Information Systems and Applications, incl. Internet/Web, and HCI (LNISA)

Included in the following conference series:

Conference proceedings info: ER 2007.

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About this book

The 26th International Conference on Conceptual Modeling in Auckland, New Zealand, hosted six workshops which allowed participants to focus their p- sentations and discussions on advanced topics that cannot easily ?t the general conference scope. Thirteen good quality proposals were received and nine were selected. Due to the similarity of their scope, two pairs were suggested to merge, leading to seven proposals. One workshop attracted fewer submissions than expected, so that its selected papers were integrated into the conference. Finally, six wo- shopswerekept.Interestingly,fourofthem(FP-UML,ONISW,QoIS,SeCoGIS) were a sequel of workshops that were held in the last few years, while two were new (CMLSA, RIGiM), exhibiting both the maturity and the innovation of the workshops. Following the call for papers, we received 114 complete submissions, from which 40 quality papers wereselected, giving an acceptance rate of 35% (a fairly standard score for workshops). The following six workshops were organized: – ConceptualModellingforLifeSciencesApplications (CMLSA2007),chaired by Yi-Ping Phoebe Chen and Sven Hartmann. This workshopaddressed the speci?c challenges posed by the large data volumes, the complexity and the data and software heterogeneity involved by life science applications. – Foundations and Practices of UML (FP-UML 2007), chaired by Juan Trujillo and Je?rey Parsons. The third edition of this workshop gathered researchers and practitioners on topics related to data warehouses, security, model transformation, state diagrams development and model quality.

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Table of contents (47 papers)

  1. Front Matter

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  2. CMLSA 2007 – International Workshop on Conceptual Modelling for Life Sciences Applications

    1. Preface to CMLSA 2007

      • Yi-Ping Phoebe Chen, Sven Hartmann
      Pages 1-2

  3. Knowledge Discovery in Life Sciences

    1. Pattern Recognition of Single-Molecule Force Spectroscopy Data

      • Dirk Labudde, Annalisa Marsico, K. Tanuj Sapra, Michael Schroeder
      Pages 3-13

    2. Massive Protein Structural Property Explorations Using New Indexing Mechanism

      • Yu-Feng Huang, Chia-Chen Chang, Chien-Kang Huang
      Pages 14-23

  4. Data Integration and Exchange in Health Informatics

    1. Data Access and Management in ACGT: Tools to Solve Syntactic and Semantic Heterogeneities Between Clinical and Image Databases

      • Luis Martín, Erwin Bonsma, Alberto Anguita, Jeroen Vrijnsen, Miguel García-Remesal, José Crespo et al.
      Pages 24-33

    2. Ontology-Based Data Integration in Data Logistics Workflows

      • Olivier Curé, Stefan Jablonski
      Pages 34-43

    3. Model-Driven Development Based Transformation of Stereotyped Class Diagrams to XML Schemas in a Healthcare Context

      • Eladio Domínguez, Jorge Lloret, Beatriz Pérez, Áurea Rodríguez, Ángel L. Rubio, María A. Zapata
      Pages 44-53

  5. Conceptual Modelling for Biological Systems

    1. An Extendable System for Conceptual Modeling and Simulation of Signal Transduction Pathways

      • Silke Eckstein, Claudia Täubner
      Pages 54-63

    2. Toward an Ontological Database for Subcellular Neuroanatomy

      • Amarnath Gupta, Stephen D. Larson, Christopher Condit, Sandeep Gupta, Lisa Fong, Li Chen et al.
      Pages 64-73

    3. Seed-Based Generation of Personalized Bio-ontologies for Information Extraction

      • Cui Tao, David W. Embley
      Pages 74-84

  6. FP-UML 2007 – International Workshop on Foundations and Practices of UML

    1. Preface to FP-UML 2007

      • Juan Trujillo, Jeffrey Parsons
      Pages 85-85

  7. Improving the Use of UML Diagrams

    1. Developing State Diagrams Using a State Specialization Technique

      • Il-Yeol Song, Ki Jung Lee
      Pages 86-95

    2. Quality Dependencies Among Use Case Models and Sequence Diagrams Developed by Novice Systems Analysts

      • Narasimha Bolloju, Vijayan Sugumaran
      Pages 96-105

    3. M-BPSec: A Method for Security Requirement Elicitation from a UML 2.0 Business Process Specification

      • Alfonso Rodríguez, Eduardo Fernández-Medina, Mario Piattini
      Pages 106-115

  8. Model Transformations and Extensions

    1. Applying Model Transformation By-Example on Business Process Modeling Languages

      • Michael Strommer, Marion Murzek, Manuel Wimmer
      Pages 116-125

    2. Extending OCL to Ensure Model Transformations

      • François Lagarde, François Terrier, Charles André, Sébastien Gérard
      Pages 126-136

    3. A UML Profile for Modeling Data Warehouse Usage

      • Veronika Stefanov, Beate List
      Pages 137-147

  9. ONISW 2007 – InternationalWorkshop on Ontologies and Information Systems for the Semantic Web

    1. Preface to ONISW 2007

      • Mathias Brochhausen, Martin Doerr, Hyoil Han
      Pages 148-148

    2. A Method for Semi-automatic Creation of Ontologies Based on Texts

      • Luiz C. C. Carvalheira, Edson Satoshi Gomi
      Pages 150-159

    3. Enriching OWL with Instance Recognition Semantics for Automated Semantic Annotation

      • Yihong Ding, David W. Embley, Stephen W. Liddle
      Pages 160-169
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  1. Conceptual Modeling - ER 2007

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