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Attention-Based Medical Caption Generation with Image Modality Classification and Clinical Concept Mapping

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Experimental IR Meets Multilinguality, Multimodality, and Interaction (CLEF 2018)

Abstract

This paper proposes an attention-based deep learning framework for caption generation from medical images. We also propose to utilize the same framework for clinical concept prediction to improve caption generation by formulating the task as a case of sequence-to-sequence learning. The predicted concept IDs are then mapped to corresponding terms in a clinical ontology to generate an image caption. We also investigate if learning to classify images based on the modality e.g. CT scan, MRI etc. can aid in generating precise captions.

C. Swisher—The author was affiliated with Philips Research at the time of this work.

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Notes

  1. 1.

    https://github.com/yunjey/show-attend-and-tell.

References

  1. Eickhoff, C., et al.: Overview of imageCLEFcaption 2017 - image caption prediction and concept detection for biomedical images. In: CLEF Labs Working Notes (2017)

    Google Scholar 

  2. Simonyan, K., Zisserman, A.: Very deep convolutional networks for large-scale image recognition (2014). arXiv:1409.1556

  3. Krizhevsky, A., et al.: ImageNet classification with deep convolutional neural networks. In: NIPS, pp. 1106–1114 (2012)

    Google Scholar 

  4. Xu, K., et al.: Show, attend and tell: neural image caption generation with visual attention. In: ICML (2015)

    Google Scholar 

  5. Aronson, A.R.: Effective mapping of biomedical text to the UMLS metathesaurus: the MetaMap program. In: AMIA (2001)

    Google Scholar 

  6. Bodenreider, O.: The unified medical language system (UMLS): integrating biomedical terminology. Nucleic Acids Res. 32(Suppl. 1), D267–D270 (2004)

    Article  Google Scholar 

  7. Datla, V., et al.: Automated clinical diagnosis: the role of content in various sections of a clinical document. In: IEEE BIBM-BHI, pp. 1004–1011 (2017)

    Google Scholar 

  8. Hasan, S.A., et al.: PRNA at imageCLEF 2017 caption prediction and concept detection tasks. In: Working Notes of CLEF (2017)

    Google Scholar 

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Correspondence to Sadid A. Hasan .

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Hasan, S.A. et al. (2018). Attention-Based Medical Caption Generation with Image Modality Classification and Clinical Concept Mapping. In: Bellot, P., et al. Experimental IR Meets Multilinguality, Multimodality, and Interaction. CLEF 2018. Lecture Notes in Computer Science(), vol 11018. Springer, Cham. https://doi.org/10.1007/978-3-319-98932-7_21

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  • DOI: https://doi.org/10.1007/978-3-319-98932-7_21

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-98931-0

  • Online ISBN: 978-3-319-98932-7

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