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Biomedical Data Management and Graph Online Querying

VLDB 2015 Workshops, Big-O(Q) and DMAH, Waikoloa, HI, USA, August 31 – September 4, 2015, Revised Selected Papers

  • Conference proceedings
  • © 2016

Overview

Editors:
  1. Fusheng Wang

    1. Stony Brook University, Stony Brook, USA

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  2. Gang Luo

    1. University of Utah, Salt Lake City, USA

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  3. Chunhua Weng

    1. Columbia University, New York, USA

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  4. Arijit Khan

    1. Nanyang Technological University, Singapore, Singapore

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  5. Prasenjit Mitra

    1. Qatar Computing Research Institute, Doha, Qatar

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  6. Cong Yu

    1. Google Research, New York, USA

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 9579)

Part of the book sub series: Information Systems and Applications, incl. Internet/Web, and HCI (LNISA)

Included in the following conference series:

Conference proceedings info: DMAH 2015, Big-O(Q) 2015.

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About this book

This book constitutes the refereed proceedings of the two International Workshops on Big-Graphs Online Querying, Big-O(Q) 2015, and Data Management and Analytics for Medicine and Healthcare, DMAH 2015, held at Waikoloa, Hawaii, USA on August 31 and September 4, 2015, in conjunction with the 41st International Conference on Very Large Data Bases, VLDB 2015.
The 9 revised full papers presented together with 5 invited papers and 1 extended abstract were carefully reviewed and selected from 22 initial submissions. The papers are organized in topical sections on information retrieval and data analytics for electronic medical records; data management and visualization of medical data; biomedical data sharing and integration; medical imaging analytics; and big-graphs online querying.

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Table of contents (14 papers)

  1. Front Matter

    Pages I-XIV
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  2. Information Retrieval and Data Analytics for Electronic Medical Records

    1. Front Matter

      Pages 1-1
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    2. Vector Space Models for Encoding and Retrieving Longitudinal Medical Record Data

      • Haider Syed, Amar K. Das
      Pages 3-15

    3. The Study of the Compatibility Rules of Traditional Chinese Medicine Based on Apriori and HMETIS Hypergraph Partitioning Algorithm

      • Miao Wang, Jiayun Li, Li Chen, Yanjun Huang, Qiang Zhou, Lijuan Che et al.
      Pages 16-31

    4. Comparing Small Graph Retrieval Performance for Ontology Concepts in Medical Texts

      • Daniel R. Schlegel, Jonathan P. Bona, Peter L. Elkin
      Pages 32-44

  3. Data Management and Visualization of Medical Data

    1. Front Matter

      Pages 45-45
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    2. Maps of Human Disease: A Web-Based Framework for the Visualization of Human Disease Comorbidity and Clinical Profile Overlay

      • Naiyun Zhou, Joel Saltz, Klaus Mueller
      Pages 47-60

    3. Secure Similarity Queries: Enabling Precision Medicine with Privacy

      • Jinfei Liu, Li Xiong
      Pages 61-70

    4. Time-, Energy-, and Monetary Cost-Aware Cache Design for a Mobile-Cloud Database System

      • Mikael Perrin, Jonathan Mullen, Florian Helff, Le Gruenwald, Laurent d’Orazio
      Pages 71-85

  4. Biomedical Data Sharing and Integration

    1. Front Matter

      Pages 87-87
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    2. BiobankCloud: A Platform for the Secure Storage, Sharing, and Processing of Large Biomedical Data Sets

      • Alysson Bessani, Jörgen Brandt, Marc Bux, Vinicius Cogo, Lora Dimitrova, Jim Dowling et al.
      Pages 89-105

  5. Medical Imaging Analytics

    1. Front Matter

      Pages 107-107
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    2. Three-Dimensional Data Analytics for Pathology Imaging

      • Yanhui Liang, Jun Kong, Yangyang Zhu, Fusheng Wang
      Pages 109-125

    3. Automated Analysis of Muscle X-ray Diffraction Imaging with MCMC

      • C. David Williams, Magdalena Balazinska, Thomas L. Daniel
      Pages 126-133

    4. SparkGIS: Efficient Comparison and Evaluation of Algorithm Results in Tissue Image Analysis Studies

      • Furqan Baig, Mudit Mehrotra, Hoang Vo, Fusheng Wang, Joel Saltz, Tahsin Kurc
      Pages 134-146

  6. Big-Graphs Online Querying

    1. Front Matter

      Pages 147-147
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    2. Social Network Analytics: Beyond the Obvious

      • Laks V. S. Lakshmanan
      Pages 149-154

    3. S2X: Graph-Parallel Querying of RDF with GraphX

      • Alexander Schätzle, Martin Przyjaciel-Zablocki, Thorsten Berberich, Georg Lausen
      Pages 155-168

    4. The Time Has Come: Traversal and Reachability in Time-Varying Graphs

      • Max Wildemann, Michael Rudolf, Marcus Paradies
      Pages 169-183

    5. Robust Cardinality Estimation for Subgraph Isomorphism Queries on Property Graphs

      • Marcus Paradies, Elena Vasilyeva, Adrian Mocan, Wolfgang Lehner
      Pages 184-198
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Other volumes

  1. Biomedical Data Management and Graph Online Querying

Editors and Affiliations

  • Stony Brook University, Stony Brook, USA

    Fusheng Wang

  • University of Utah, Salt Lake City, USA

    Gang Luo

  • Columbia University, New York, USA

    Chunhua Weng

  • Nanyang Technological University, Singapore, Singapore

    Arijit Khan

  • Qatar Computing Research Institute, Doha, Qatar

    Prasenjit Mitra

  • Google Research, New York, USA

    Cong Yu

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