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A Link and Weight-Based Ensemble Clustering for Patient Stratification

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Intelligent Computing Theories and Application (ICIC 2019)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 11644))

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Abstract

Owing to its capability to combine multiple base clustering into a single robust consensus clustering, the ensemble clustering technique has attracted increasing attention over recent years. Although many successful clustering methods have been proposed, there is still room for improvement in the existing approaches. In this paper, we propose a novel ensemble clustering approach called a link and weight-based ensemble clustering (LWEC). We first generate a large number of similarity-indicators based on a scaled exponential similarity kernel. Then based on the similarity-indicators, an ensemble of diversified base clusterings is constructed. Further, we reckon how difficult it is to cluster an object by constructing the co-association matrix of the base clustering. And we regard related information as weights of objects. Experimental results on 35 high-dimensional cancer gene expression benchmark datasets and TCGA datasets demonstrate the efficiency and superiority of our approach.

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Acknowledgments

This work was supported by grants from the National Natural Science Foundation of China (No. 61873001), the Key Project of Anhui Provincial Education Department (No. KJ2017ZD01), and the Natural Science Foundation of Anhui Province (No. 1808085QF209).

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Correspondence to Chun-Hou Zheng .

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Zhang, YY., Yang, C., Wang, J., Zheng, CH. (2019). A Link and Weight-Based Ensemble Clustering for Patient Stratification. In: Huang, DS., Jo, KH., Huang, ZK. (eds) Intelligent Computing Theories and Application. ICIC 2019. Lecture Notes in Computer Science(), vol 11644. Springer, Cham. https://doi.org/10.1007/978-3-030-26969-2_24

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  • DOI: https://doi.org/10.1007/978-3-030-26969-2_24

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-26968-5

  • Online ISBN: 978-3-030-26969-2

  • eBook Packages: Computer ScienceComputer Science (R0)

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