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Implementing Byte-Range Locks Using MPI One-Sided Communication

  • Conference paper
Recent Advances in Parallel Virtual Machine and Message Passing Interface (EuroPVM/MPI 2005)

Part of the book series: Lecture Notes in Computer Science ((LNPSE,volume 3666))

Abstract

We present an algorithm for implementing byte-range locks using MPI passive-target one-sided communication. This algorithm is useful in any scenario in which multiple processes of a parallel program need to acquire exclusive access to a range of bytes. One application of this algorithm is for implementing MPI-IO’s atomic-access mode in the absence of atomicity guarantees from the underlying file system. Another application is for implementing data sieving, a technique for optimizing noncontiguous writes by doing an atomic read-modify-write of a large, contiguous block of data. This byte-range locking algorithm can be used instead of POSIX fcntl file locks on file systems that do not support fcntl locks, on file systems where fcntl locks are unreliable, and on file systems where fcntl locks perform poorly. Our performance results demonstrate that the algorithm has low overhead and significantly outperforms fcntl locks on NFS file systems on a Linux cluster and on a Sun SMP.

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References

  1. Carns, P.H., Ligon III, W.B., Ross, R.B., Thakur, R.: PVFS: A parallel file system for Linux clusters. In: Proceedings of the 4th Annual Linux Showcase and Conference, Atlanta, October 2000, pp. 317–327 (2000)

    Google Scholar 

  2. Corbett, P.F., Feitelson, D.G.: The Vesta parallel file system. ACM Transactions on Computer Systems 14(3), 225–264 (1996)

    Article  Google Scholar 

  3. Gropp, W., Lusk, E., Thakur, R.: Using MPI-2: Advanced Features of the Message-Passing Interface. MIT Press, Cambridge (1999)

    Google Scholar 

  4. Huber, J., Elford, C.L., Reed, D.A., Chien, A.A., Blumenthal, D.S.: PPFS: A high performance portable parallel file system. In: Proceedings of the 9th ACM International Conference on Supercomputing, July 1995, pp. 385–394. ACM Press, New York (1995)

    Chapter  Google Scholar 

  5. IEEE/ANSI Std. 1003.1. Portable Operating System Interface (POSIX)–Part 1: System Application Program Interface (API) [C Language] (1996) (edition)

    Google Scholar 

  6. Mellor-Crummey, J.M., Scott, M.L.: Algorithms for scalable synchronization on shared-memory multiprocessors. ACM Transactions on Computer Systems (1991)

    Google Scholar 

  7. Message Passing Interface Forum. MPI-2: Extensions to the Message-Passing Interface (July 1997), http://www.mpi-forum.org/docs/docs.html

  8. Nieuwejaar, N., Kotz, D.: The Galley parallel file system. Parallel Computing 23(4), 447–476 (1997)

    Article  MATH  Google Scholar 

  9. PVFS2: Parallel virtual file system, http://www.pvfs.org/pvfs2/

  10. Red Hat Global File System, http://www.redhat.com/software/rha/gfs

  11. ROMIO: A high-performance, portable MPI-IO implementation, http://www.mcs.anl.gov/romio

  12. Ross, R., Latham, R., Gropp, W., Thakur, R., Toonen, B.: Implementing MPI-IO atomic mode without file system support. In: Proceedings of CCGrid 2005 (May 2005)

    Google Scholar 

  13. Thakur, R., Gropp, W., Lusk, E.: On implementing MPI-IO portably and with high performance. In: Proceedings of the 6th Workshop on I/O in Parallel and Distributed Systems, May 1999, pp. 23–32. ACM Press, New York (1999)

    Chapter  Google Scholar 

  14. Thakur, R., Gropp, W., Lusk, E.: Optimizing noncontiguous accesses in MPI-IO. Parallel Computing 28(1), 83–105 (2002)

    Article  MATH  Google Scholar 

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© 2005 Springer-Verlag Berlin Heidelberg

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Thakur, R., Ross, R., Latham, R. (2005). Implementing Byte-Range Locks Using MPI One-Sided Communication. In: Di Martino, B., Kranzlmüller, D., Dongarra, J. (eds) Recent Advances in Parallel Virtual Machine and Message Passing Interface. EuroPVM/MPI 2005. Lecture Notes in Computer Science, vol 3666. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11557265_19

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  • DOI: https://doi.org/10.1007/11557265_19

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-29009-4

  • Online ISBN: 978-3-540-31943-6

  • eBook Packages: Computer ScienceComputer Science (R0)

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