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Inge Jonassen
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2020 – today
- 2021
- [j34]Ksenia Lavrichenko, Øyvind Helgeland, Pål R. Njølstad, Inge Jonassen, Stefan Johansson
:
SeeCiTe: a method to assess CNV calls from SNP arrays using trio data. Bioinform. 37(13): 1876-1883 (2021) - 2020
- [j33]Yaxin Xue
Reconstructing ribosomal genes from large scale total RNA meta-transcriptomic data. Bioinform. 36(11): 3365-3371 (2020) - [j32]Xiaokang Zhang
RASflow: an RNA-Seq analysis workflow with Snakemake. BMC Bioinform. 21(1): 110 (2020)
2010 – 2019
- 2019
- [c7]Xiaokang Zhang
An Ensemble Feature Selection Framework Integrating Stability. BIBM 2019: 2792-2798 - [c6]Xiaokang Zhang
A Comparative Analysis of Feature Selection Methods for Biomarker Discovery in Study of Toxicant-Treated Atlantic Cod (Gadus Morhua) Liver. NAIS 2019: 114-123 - [i3]Xiaokang Zhang, Inge Jonassen:
A Comparative Analysis of Feature Selection Methods for Biomarker Discovery in Study of Toxicant-treated Atlantic Cod (Gadus morhua) Liver. CoRR abs/1905.08048 (2019) - 2018
- [j31]Konstantina Dimitrakopoulou
Deblender: a semi-/unsupervised multi-operational computational method for complete deconvolution of expression data from heterogeneous samples. BMC Bioinform. 19(1): 408:1-408:17 (2018) - [i2]Xiaokang Zhang
EFSIS: Ensemble Feature Selection Integrating Stability. CoRR abs/1811.07939 (2018) - [i1]Kidane M. Tekle, Sveinung Gundersen
Norwegian e-Infrastructure for Life Sciences (NeLS). F1000Research 7: 968 (2018) - 2016
- [j30]Tomasz Stokowy
RareVariantVis: new tool for visualization of causative variants in rare monogenic disorders using whole genome sequencing data. Bioinform. 32(19): 3018-3020 (2016) - 2013
- [j29]Susanne Balzer, Ketil Malde, Markus A. Grohme
Filtering duplicate reads from 454 pyrosequencing data. Bioinform. 29(7): 830-836 (2013) - [j28]Jon C. Ison
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. Bioinform. 29(10): 1325-1332 (2013) - 2011
- [j27]Susanne Balzer, Ketil Malde, Inge Jonassen
Systematic exploration of error sources in pyrosequencing flowgram data. Bioinform. 27(13): 304-309 (2011) - [j26]Susanne Balzer, Ketil Malde, Anders Lanzén
Characteristics of 454 pyrosequencing data - enabling realistic simulation with flowsim. Bioinform. 27(15): 2171 (2011) - [j25]Siv Midtun Hollup, Michael I. Sadowski
Exploring the limits of fold discrimination by structural alignment: A large scale benchmark using decoys of known fold. Comput. Biol. Chem. 35(3): 174-188 (2011) - 2010
- [j24]Susanne Balzer, Ketil Malde, Anders Lanzén
Characteristics of 454 pyrosequencing data - enabling realistic simulation with flowsim. Bioinform. 26(18) (2010) - [j23]Matús Kalas
BioXSD: the common data-exchange format for everyday bioinformatics web services. Bioinform. 26(18) (2010) - [j22]Steve Pettifer
The EMBRACE web service collection. Nucleic Acids Res. 38(Web-Server-Issue): 683-688 (2010)
2000 – 2009
- 2008
- [j21]Robert Giegerich, Alvis Brazma
The BREW workshop series: a stimulating experience in PhD education. Briefings Bioinform. 9(3): 250-253 (2008) - 2007
- [j20]Lars Skjaerven
TMM@: a web application for the analysis of transmembrane helix mobility. BMC Bioinform. 8 (2007) - 2006
- [j19]Ketil Malde, Korbinian Schneeberger, Eivind Coward, Inge Jonassen
RBR: library-less repeat detection for ESTs. Bioinform. 22(18): 2232-2236 (2006) - [j18]Inge Jonassen
Protein model refinement using structural fragment tessellation. Comput. Biol. Chem. 30(5): 360-366 (2006) - 2005
- [j17]Ketil Malde, Eivind Coward, Inge Jonassen
A graph based algorithm for generating EST consensus sequences. Bioinform. 21(8): 1371-1375 (2005) - [j16]Junhyong Kim, Inge Jonassen:
Guest Editorial: WABI Special Section Part II. IEEE ACM Trans. Comput. Biol. Bioinform. 2(1): 1-2 (2005) - [p1]Inge Jonassen:
Integrative Models for the Prediction and Understanding of Protein Structure Patterns. Data Analysis and Visualization in Genomics and Proteomics 2005: 239-255 - 2004
- [b1]Ingvar Eidhammer, Inge Jonassen, William R. Taylor:
Protein bioinformatics - an algorithmic approach to sequence and structure analysis. Wiley 2004, ISBN 978-0-470-84839-5, pp. I-XVIII, 1-355 - [j15]Kristian Flikka
XHM: A system for detection of potential cross hybridizations in DNA microarrays. BMC Bioinform. 5: 117 (2004) - [j14]Junhyong Kim, Inge Jonassen:
Guest Editorial: WABI Special Section Part 1. IEEE ACM Trans. Comput. Biol. Bioinform. 1(4): 137-138 (2004) - [e1]Inge Jonassen, Junhyong Kim:
Algorithms in Bioinformatics, 4th International Workshop, WABI 2004, Bergen, Norway, September 17-21, 2004, Proceedings. Lecture Notes in Computer Science 3240, Springer 2004, ISBN 3-540-23018-1 [contents] - 2003
- [j13]Ketil Malde, Eivind Coward, Inge Jonassen
Fast Sequence Clustering Using A Suffix Array Algorithm. Bioinform. 19(10): 1221-1226 (2003) - [j12]Junbai Wang, Trond Hellem Bø, Inge Jonassen
Tumor classification and marker gene prediction by feature selection and fuzzy c-means clustering using microarray data. BMC Bioinform. 4: 60 (2003) - 2002
- [j11]Trond Hellem Bø, Inge Jonassen
A fast top-down method for constructing reliable radiation hybrid frameworks. Bioinform. 18(1): 11-18 (2002) - [j10]Darrell Conklin, Inge Jonassen
Association of nucleotide patterns with gene function classes: application to human 3' untranslated sequences. Bioinform. 18(1): 182-189 (2002) - [j9]Inge Jonassen
Structure motif discovery and mining the PDB. Bioinform. 18(2): 362-367 (2002) - 2001
- [j8]B. Dysvik, Inge Jonassen
J-Express: exploring gene expression data using Java. Bioinform. 17(4): 369-370 (2001) - [j7]Ingvar Eidhammer, Inge Jonassen, Svenn Helge Grindhaug, David R. Gilbert, Madu Ratnayake:
A Constraint Based Structure Description Language for Biosequences. Constraints An Int. J. 6(2/3): 173-200 (2001) - [j6]Rolf Apweiler
The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res. 29(1): 37-40 (2001) - 2000
- [j5]Rolf Apweiler
InterPro-an integrated documentation resource for protein families, domains and functional sites. Bioinform. 16(12): 1145-1150 (2000) - [j4]Ingvar Eidhammer, Inge Jonassen
Structure Comparison and Structure Patterns. J. Comput. Biol. 7(5): 685-716 (2000) - [c5]Inge Jonassen, Ingvar Eidhammer, Darrell Conklin, William R. Taylor:
Structure Motif Discovery and Mining the PDB. German Conference on Bioinformatics 2000: 175-182 - [c4]Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Robinson, Esko Ukkonen:
Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data. ISMB 2000: 384-394
1990 – 1999
- 1998
- [j3]Alvis Brazma
Approaches to the Automatic Discovery of Patterns in Biosequences. J. Comput. Biol. 5(2): 279-305 (1998) - [c3]Alvis Brazma, Inge Jonassen, Jaak Vilo, Esko Ukkonen:
Predicting gene regulatory elements from their expression data in the complete yeast genome. German Conference on Bioinformatics 1998 - [c2]Alvis Brazma
Pattern Discovery in Biosequences. ICGI 1998: 257-270 - 1997
- [j2]Inge Jonassen:
Efficient discovery of conserved patterns using a pattern graph. Comput. Appl. Biosci. 13(5): 509-522 (1997) - 1996
- [c1]Alvis Brazma, Inge Jonassen, Esko Ukkonen, Jaak Vilo:
Discovering Patterns and Subfamilies in Biosequences. ISMB 1996: 34-43 - 1991
- [j1]Rune Espelid, Inge Jonassen:
A comparison of splitting methods for the identification of corner-points. Pattern Recognit. Lett. 12(2): 79-83 (1991)
Coauthor Index
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