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Sepideh Babaei
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2020 – today
- 2023
- [j10]Mohammed Zidane, Ahmad Makky
, Matthias Bruhns, Alexander Rochwarger, Sepideh Babaei, Manfred Claassen, Christian M. Schürch:
A review on deep learning applications in highly multiplexed tissue imaging data analysis. Frontiers Bioinform. 3 (2023) - [j9]Mohammed Zidane, Ahmad Makky, Matthias Bruhns, Alexander Rochwarger, Sepideh Babaei, Manfred Claassen, Christian M. Schürch:
Corrigendum: A review on deep learning applications in highly multiplexed tissue imaging data analysis. Frontiers Bioinform. 3 (2023) - [j8]Sepideh Babaei, Jonathan Christ, Vivek Sehra, Ahmad Makky
S3-CIMA: Supervised spatial single-cell image analysis for identifying disease-associated cell-type compositions in tissue. Patterns 4(9): 100829 (2023)
2010 – 2019
- 2015
- [b1]Sepideh Babaei:
Multi-scale network analyses for cancer omics data. Delft University of Technology, Netherlands, 2015 - [j7]Margherita Francescatto
Highlights from the Third European International Society for Computational Biology (ISCB) Student Council Symposium 2014. BMC Bioinform. 16(S-3): A1 (2015) - [j6]Erdogan Taskesen
Integration of gene expression and DNA-methylation profiles improves molecular subtype classification in acute myeloid leukemia. BMC Bioinform. 16(S-4): S5 (2015) - [j5]Sepideh Babaei, Ahmed Mahfouz
Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex. PLoS Comput. Biol. 11(5) (2015) - 2013
- [j4]Sepideh Babaei, Marc Hulsman, Marcel J. T. Reinders, Jeroen de Ridder
Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion. BMC Bioinform. 14: 29 (2013) - 2012
- [j3]Sepideh Babaei, Amir Geranmayeh
Towards designing modular recurrent neural networks in learning protein secondary structures. Expert Syst. Appl. 39(6): 6263-6274 (2012) - 2011
- [c2]Sepideh Babaei, Erik van den Akker, Jeroen de Ridder
Integrating Protein Family Sequence Similarities with Gene Expression to Find Signature Gene Networks in Breast Cancer Metastasis. PRIB 2011: 247-259 - 2010
- [j2]Sepideh Babaei, Amir Geranmayeh
Protein secondary structure prediction using modular reciprocal bidirectional recurrent neural networks. Comput. Methods Programs Biomed. 100(3): 237-247 (2010)
2000 – 2009
- 2009
- [j1]Sepideh Babaei, Amir Geranmayeh
Heart sound reproduction based on neural network classification of cardiac valve disorders using wavelet transforms of PCG signals. Comput. Biol. Medicine 39(1): 8-15 (2009) - 2008
- [c1]Sepideh Babaei, Seyyed Ali Seyyedsalehi
Pruning neural networks for protein secondary structure prediction. BIBE 2008: 1-6
Coauthor Index
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