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Bruce Tidor
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- affiliation: MIT, Cambridge, USA
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2010 – 2019
- 2013
- [j12]Tina Toni, Bruce Tidor:
Combined Model of Intrinsic and Extrinsic Variability for Computational Network Design with Application to Synthetic Biology. PLoS Comput. Biol. 9(3) (2013) - 2011
- [j11]XiaoNa Wei, Bu-Cong Han, Jing-Xian Zhang, X. H. Liu, C. Y. Tan, Yu Yang Jiang, Boon Chuan Low
, Bruce Tidor, Yuzong Chen
An Integrated Mathematical Model of Thrombin-, Histamine-and VEGF-Mediated Signalling in Endothelial Permeability. BMC Syst. Biol. 5: 112 (2011) - [c6]Jared E. Toettcher, Anya Castillo, Bruce Tidor, Jacob White:
Biochemical oscillator sensitivity analysis in the presence of conservation constraints. DAC 2011: 806-811 - 2010
- [c5]Daniel Machado, Rafael S. Costa, Miguel Rocha, Isabel Rocha, Bruce Tidor, Eugénio C. Ferreira:
Model Transformation of Metabolic Networks using a Petri Net Based Framework. ACSD/Petri Nets Workshops 2010: 103-117
2000 – 2009
- 2009
- [j10]Bracken M. King, Bruce Tidor:
MIST: Maximum Information Spanning Trees for dimension reduction of biological data sets. Bioinform. 25(9): 1165-1172 (2009) - [j9]Michael D. Altman, Jaydeep P. Bardhan, Jacob K. White, Bruce Tidor:
Accurate solution of multi-region continuum biomolecule electrostatic problems using the linearized Poisson-Boltzmann equation with curved boundary elements. J. Comput. Chem. 30(1): 132-153 (2009) - [j8]Bernard R. Brooks, Charles L. Brooks III, Alexander D. MacKerell Jr., Lennart Nilsson
CHARMM: The biomolecular simulation program. J. Comput. Chem. 30(10): 1545-1614 (2009) - [j7]Eun-Jong Hong, Shaun M. Lippow, Bruce Tidor, Tomás Lozano-Pérez:
Rotamer optimization for protein design through MAP estimation and problem-size reduction. J. Comput. Chem. 30(12): 1923-1945 (2009) - [j6]A. Katharina Wilkins, Bruce Tidor, Jacob K. White, Paul I. Barton:
Sensitivity Analysis for Oscillating Dynamical Systems. SIAM J. Sci. Comput. 31(4): 2706-2732 (2009) - [c4]Daniel Machado
A Critical Review on Modelling Formalisms and Simulation Tools in Computational Biosystems. IWANN (2) 2009: 1063-1070 - 2008
- [j5]Mala L. Radhakrishnan
Optimal Drug Cocktail Design: Methods for Targeting Molecular Ensembles and Insights from Theoretical Model Systems. J. Chem. Inf. Model. 48(5): 1055-1073 (2008) - [j4]Shih-Hsien Kuo, Bruce Tidor, Jacob White:
A meshless, spectrally accurate, integral equation solver for molecular surface electrostatics. ACM J. Emerg. Technol. Comput. Syst. 4(2): 6:1-6:30 (2008) - [j3]Joshua F. Apgar, Jared E. Toettcher, Drew Endy
Stimulus Design for Model Selection and Validation in Cell Signaling. PLoS Comput. Biol. 4(2) (2008) - 2007
- [j2]A. Katharina Wilkins, Paul I. Barton, Bruce Tidor:
The Per2 Negative Feedback Loop Sets the Period in the Mammalian Circadian Clock Mechanism. PLoS Comput. Biol. 3(12) (2007) - [c3]Jaydeep P. Bardhan, Michael D. Altman, Jacob K. White, Bruce Tidor:
Efficient optimization of electrostatic interactions between biomolecules. CDC 2007: 4563-4569 - 2006
- [j1]Michael D. Altman, Jaydeep P. Bardhan, Bruce Tidor, Jacob K. White:
FFTSVD: A Fast Multiscale Boundary-Element Method Solver Suitable for Bio-MEMS and Biomolecule Simulation. IEEE Trans. Comput. Aided Des. Integr. Circuits Syst. 25(2): 274-284 (2006) - 2002
- [c2]Shihhsien S. Kuo, Michael D. Altman, Jaydeep P. Bardhan, Bruce Tidor, Jacob K. White:
Fast methods for simulation of biomolecule electrostatics. ICCAD 2002: 466-473
1990 – 1999
- 1993
- [c1]Michael de la Maza, Bruce Tidor:
An Analysis of Selection Procedures with Particular Attention Paid to Proportional and Boltzmann Selection. ICGA 1993: 124-131 - 1992
- [p1]Michael de la Maza, Bruce Tidor:
Increased Flexibility in Genetic Algorithms: the Use of variable Boltzmann Selective pressure to control Propagation. Computer Science and Operations Research 1992: 425-440
Coauthor Index
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