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Jochen H. M. Prehn
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2020 – today
- 2022
- [j9]John F. Graf, Sanghee Cho, Elizabeth McDonough, Alex Corwin, Anup Sood, Andreas Lindner, Manuela Salvucci, Xanthi Stachtea, Sandra Van Schaeybroeck, Philip D. Dunne, Pierre Laurent-Puig, Daniel B. Longley, Jochen H. M. Prehn, Fiona Ginty:
FLINO: a new method for immunofluorescence bioimage normalization. Bioinform. 38(2): 520-526 (2022) - 2021
- [j8]Paul D. Donovan, Natalie M. McHale, Morten T. Venø, Jochen H. M. Prehn:
tsRNAsearch: a pipeline for the identification of tRNA and ncRNA fragments from small RNA-sequencing data. Bioinform. 37(23): 4424-4430 (2021) - [c1]Sandeep Chenna, Jochen H. M. Prehn, Niamh M. C. Connolly:
Phenomenological equations for electron transport chain-mediated reactive oxygen species metabolism. BIBM 2021: 653-658
2010 – 2019
- 2019
- [j7]Manuela Salvucci, Jochen H. M. Prehn:
HCP: A Matlab package to create beautiful heatmaps with richly annotated covariates. J. Open Source Softw. 4(38): 1291 (2019) - [j6]Anna Matveeva, Michael Fichtner, Katherine S. L. McAllister, Christopher McCann, Marc Sturrock, Daniel B. Longley, Jochen H. M. Prehn:
Heterogeneous responses to low level death receptor activation are explained by random molecular assembly of the Caspase-8 activation platform. PLoS Comput. Biol. 15(9) (2019) - 2017
- [j5]Stefan J. Haunsberger, Niamh M. C. Connolly, Jochen H. M. Prehn:
miRNAmeConverter: an R/bioconductor package for translating mature miRNA names to different miRBase versions. Bioinform. 33(4): 592-593 (2017) - [j4]Guiyeom Kang, Claudio Márquez, Ana Barat, Annette T. Byrne, Jochen H. M. Prehn, Joan Sorribes, Eduardo César:
Colorectal tumour simulation using agent based modelling and high performance computing. Future Gener. Comput. Syst. 67: 397-408 (2017) - 2012
- [j3]Crina-Maria Ionescu, Radka Svobodová Vareková, Jochen H. M. Prehn, Heinrich J. Huber, Jaroslav Koca:
Charge Profile Analysis Reveals That Activation of Pro-apoptotic Regulators Bax and Bak Relies on Charge Transfer Mediated Allosteric Regulation. PLoS Comput. Biol. 8(6) (2012) - 2010
- [j2]Heinrich J. Huber, Maike A. Laussmann, Jochen H. M. Prehn, Markus Rehm:
Diffusion is capable of translating anisotropic apoptosis initiation into a homogeneous execution of cell death. BMC Syst. Biol. 4: 9 (2010)
2000 – 2009
- 2007
- [j1]Heinrich J. Huber, Markus Rehm, Martin Plchút, Heiko Düssmann, Jochen H. M. Prehn:
APOPTO-CELL - a simulation tool and interactive database for analyzing cellular susceptibility to apoptosis. Bioinform. 23(5): 648-650 (2007)
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