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Jean-Fred Fontaine
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2020 – today
- 2022
- [j15]Maximilian Sprang
, Miguel A. Andrade-Navarro
Batch effect detection and correction in RNA-seq data using machine-learning-based automated assessment of quality. BMC Bioinform. 23(1): 279 (2022) - 2021
- [j14]Piyush More
LipiDisease: associate lipids to diseases using literature mining. Bioinform. 37(21): 3981-3982 (2021)
2010 – 2019
- 2017
- [c2]Marco Frasca
Disease-Genes Must Guide Data Source Integration in the Gene Prioritization Process. CIBB 2017: 60-69 - [c1]Michael G. Sadovsky, Jean-Fred Fontaine, Miguel A. Andrade-Navarro, Yury Yakubailik, Natalia Rudenko:
Lost Strings in Genomes: What Sense Do They Make? IWBBIO (2) 2017: 20-29 - 2014
- [j13]Harald Stachelscheid
CellFinder: a cell data repository. Nucleic Acids Res. 42(Database-Issue): 950-958 (2014) - [j12]José A. Gijón-Correas, Miguel A. Andrade-Navarro, Jean-Fred Fontaine:
Alkemio: association of chemicals with biomedical topics by text and data mining. Nucleic Acids Res. 42(Webserver-Issue): 422-429 (2014) - 2013
- [j11]Mariana L. Neves
Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts. Database J. Biol. Databases Curation 2013 (2013) - [j10]Francisco M. Ortuño Guzman
Using cited references to improve the retrieval of related biomedical documents. BMC Bioinform. 14: 113 (2013) - [j9]Stefanie Seltmann
CELDA - an ontology for the comprehensive representation of cells in complex systems. BMC Bioinform. 14: 228 (2013) - [j8]Martin H. Schaefer
Adding Protein Context to the Human Protein-Protein Interaction Network to Reveal Meaningful Interactions. PLoS Comput. Biol. 9(1) (2013) - 2011
- [j7]Tiago J. S. Lopes, Martin H. Schaefer
Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases. Bioinform. 27(17): 2414-2421 (2011) - [j6]Adriano Barbosa-Silva
PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries. BMC Bioinform. 12: 435 (2011) - [j5]Jean-Fred Fontaine, Florian Priller, Adriano Barbosa-Silva
Génie: literature-based gene prioritization at multi genomic scale. Nucleic Acids Res. 39(Web-Server-Issue): 455-461 (2011) - 2010
- [j4]Adriano Barbosa-Silva
LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships. BMC Bioinform. 11: 70 (2010)
2000 – 2009
- 2009
- [j3]Jean-Fred Fontaine, Adriano Barbosa-Silva
MedlineRanker: flexible ranking of biomedical literature. Nucleic Acids Res. 37(Web-Server-Issue): 141-146 (2009) - 2005
- [j2]André Lambert, Matthieu Legendre, Jean-Fred Fontaine, Daniel Gautheret
Computing expectation values for RNA motifs using discrete convolutions. BMC Bioinform. 6: 118 (2005) - 2004
- [j1]André Lambert, Jean-Fred Fontaine, Matthieu Legendre, Fabrice Leclerc
The ERPIN server: an interface to profile-based RNA motif identification. Nucleic Acids Res. 32(Web-Server-Issue): 160-165 (2004)
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