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Vinay Varadan
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2020 – today
- 2022
- [j8]Sirvan Khalighi
, Peronne Joseph, Deepak Babu
SYSMut: decoding the functional significance of rare somatic mutations in cancer. Briefings Bioinform. 23(4) (2022) - 2020
- [i1]Nathaniel Braman
Deep learning-based prediction of response to HER2-targeted neoadjuvant chemotherapy from pre-treatment dynamic breast MRI: A multi-institutional validation study. CoRR abs/2001.08570 (2020)
2010 – 2019
- 2019
- [c16]Niha G. Beig, Prateek Prasanna
Radiogenomic characterization of response to chemo-radiation therapy in glioblastoma is associated with PI3K/AKT/mTOR and apoptosis signaling pathways. Medical Imaging: Computer-Aided Diagnosis 2019: 109501B - 2017
- [c15]Niha G. Beig
Radiogenomic analysis of hypoxia pathway reveals computerized MRI descriptors predictive of overall survival in glioblastoma. Medical Imaging: Computer-Aided Diagnosis 2017: 101341U - 2015
- [c14]Abolfazl Razi, Fatemeh Afghah, Vinay Varadan:
Identifying gene subnetworks associated with clinical outcome in ovarian cancer using Network Based Coalition Game. EMBC 2015: 6509-6513 - [c13]Abolfazl Razi, Nilanjana Banerjee, Nevenka Dimitrova, Vinay Varadan:
Non-linear Bayesian framework to determine the transcriptional effects of cancer-associated genomic aberrations. EMBC 2015: 6514-6518 - 2013
- [c12]Vinay Varadan, Vartika Agrawal, Lyndsay N. Harris, Nevenka Dimitrova:
Identification and characterization of gene fusions in breast cancer - A non-trivial pursuit. GlobalSIP 2013: 109-112 - 2012
- [j7]Vinay Varadan, Prateek Mittal, Charles J. Vaske
The Integration of Biological Pathway Knowledge in Cancer Genomics: A review of existing computational approaches. IEEE Signal Process. Mag. 29(1): 35-50 (2012) - [c11]Vinay Varadan, Angel Janevski, Sitharthan Kamalakaran, Nilanjana Banerjee, Nevenka Dimitrova, Lyndsay N. Harris:
Statistical assessment of gene fusion detection algorithms using RNA Sequencing Data. SSP 2012: 708-711 - 2011
- [c10]Man-Hung Eric Tang
A method for finding novel associations between genome-wide copy number and dna methylation patterns. GENSiPS 2011: 78-82 - [c9]Angel Janevski, Vinay Varadan, Sitharthan Kamalakaran, Nilanjana Banerjee, Nevenka Dimitrova:
Comparative copy number variation from whole genome sequencing. GENSiPS 2011: 123-126 - 2010
- [c8]Nilanjana Banerjee, Angel Janevski, Sitharthan Kamalakaran, Vinay Varadan, Robert Lucito, Nevenka Dimitrova:
Pathway and network analysis probing epigenetic influences on chemosensitivity in ovarian cancer. GENSiPS 2010: 1-4
2000 – 2009
- 2009
- [j6]Angel Janevski
PAPAyA: a platform for breast cancer biomarker signature discovery, evaluation and assessment. BMC Bioinform. 10(S-9): 7 (2009) - [c7]Nilanjana Banerjee, Vinay Varadan, Sitharthan Kamalakaran, Angel Janevski
Towards identification of thematic overlaps in gene sets. GENSiPS 2009: 1-4 - [c6]Nevenka Dimitrova, Sitharthan Kamalakaran, Angel Janevski, Nilanjana Banerjee, Vinay Varadan, Robert Lucito, James Hicks:
Tools for High Throughput Differential Methylation Study in Cancer. ICT Innovations 2009: 33-34 - 2006
- [j5]Vinay Varadan, Dimitris Anastassiou:
Inference of Disease-Related Molecular Logic from Systems-Based Microarray Analysis. PLoS Comput. Biol. 2(6) (2006) - [j4]Vinay Varadan, Henry Leung, Éloi Bossé:
Dynamical model reconstruction and accurate prediction of power-pool time series. IEEE Trans. Instrum. Meas. 55(1): 327-336 (2006) - [c5]Vinay Varadan, David M. Miller III, Dimitris Anastassiou:
Computational inference of the molecular logic for synaptic connectivity in C. elegans. ISMB (Supplement of Bioinformatics) 2006: 497-506 - 2005
- [c4]Philip M. Long, Vinay Varadan, Sarah Gilman, Mark Treshock, Rocco A. Servedio:
Unsupervised evidence integration. ICML 2005: 521-528 - 2003
- [j3]Trent McConaghy, Henry Leung, Éloi Bossé, Vinay Varadan:
Classification of audio radar signals using radial basis function neural networks. IEEE Trans. Instrum. Meas. 52(6): 1771-1779 (2003) - 2002
- [c3]Henry Leung, Vinay Varadan:
System Modeling and Design using Genetic Programming. IEEE ICCI 2002: 88-97 - [c2]Vinay Varadan, Henry Leung:
Chaotic system reconstruction from noisy time series measurements using improved least squares genetic programming. ISCAS (3) 2002: 65-68 - 2001
- [j2]Krishnamurthy Murali, Haiyang Yu, Vinay Varadan, Henry Leung:
Secure communication using a chaos based signal encryption scheme. IEEE Trans. Consumer Electron. 47(4): 709-714 (2001) - [j1]Vinay Varadan, Henry Leung:
Reconstruction of polynomial systems from noisy time-series measurements using genetic programming. IEEE Trans. Ind. Electron. 48(4): 742-748 (2001) - [c1]Vinay Varadan, Henry Leung:
Design of piece-wise maps for spread spectrum communication using genetic programming. ISCAS (3) 2001: 225-228
Coauthor Index
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