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Michael I. Love
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2020 – today
- 2024
- [i3]Yu-Ning Huang, Michael I. Love, Cynthia Flaire Ronkowski, Dhrithi Deshpande, Lynn M. Schriml, Annie Wong-Beringer, Barend Mons, Russell Corbett-Detig, Christopher I Hunter, Jason H. Moore, Lana X. Garmire, T. B. K. Reddy, Winston A. Hide, Atul J. Butte, Mark D. Robinson, Serghei Mangul:
Perceptual and technical barriers in sharing and formatting metadata accompanying omics studies. CoRR abs/2401.02965 (2024) - 2023
- [j16]Hunyong Cho, Yixiang Qu
, Chuwen Liu, Boyang Tang, Ruiqi Lyu, Bridget M. Lin, Jeffrey Roach, M. Andrea Azcarate-Peril, Apoena Aguiar Ribeiro
, Michael I. Love, Kimon Divaris
, Di Wu
:
Comprehensive evaluation of methods for differential expression analysis of metatranscriptomics data. Briefings Bioinform. 24(5) (2023) - [j15]Jonathan D. Ogata, Wancen Mu, Eric S. Davis
, Bingjie Xue, J. Chuck Harrell, Nathan C. Sheffield, Douglas H. Phanstiel, Michael I. Love
, Mikhail G. Dozmorov
:
excluderanges: exclusion sets for T2T-CHM13, GRCm39, and other genome assemblies. Bioinform. 39(4) (2023) - [j14]Eric S. Davis
, Wancen Mu, Stuart Lee
, Mikhail G. Dozmorov, Michael I. Love
, Douglas H. Phanstiel:
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling. Bioinform. 39(5) (2023) - [j13]Wancen Mu, Eric S. Davis
, Stuart Lee
, Mikhail G. Dozmorov, Douglas H. Phanstiel, Michael I. Love
:
bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing. Bioinform. 39(5) (2023) - [j12]Miheer Dewaskar, John Palowitch, Mark He, Michael I. Love, Andrew B. Nobel:
Finding Groups of Cross-Correlated Features in Bi-View Data. J. Mach. Learn. Res. 24: 398:1-398:47 (2023) - 2022
- [j11]Nicole E. Kramer, Eric S. Davis
, Craig Wenger, Erika Deoudes, Sarah M. Parker, Michael I. Love, Douglas H. Phanstiel
:
Plotgardener: cultivating precise multi-panel figures in R. Bioinform. 38(7): 2042-2045 (2022) - [j10]Wancen Mu, Hirak Sarkar
, Avi Srivastava
, Kwangbom Choi, Rob Patro
, Michael I. Love
:
Airpart: interpretable statistical models for analyzing allelic imbalance in single-cell datasets. Bioinform. 38(10): 2773-2780 (2022) - 2021
- [j9]Arjun Bhattacharya
, Alina M. Hamilton, Helena Furberg, Eugene Pietzak, Mark P. Purdue
, Melissa A. Troester, Katherine A. Hoadley, Michael I. Love
:
An approach for normalization and quality control for NanoString RNA expression data. Briefings Bioinform. 22(3) (2021) - [j8]Scott Van Buren, Hirak Sarkar
, Avi Srivastava
, Naim U. Rashid, Rob Patro, Michael I. Love
:
Compression of quantification uncertainty for scRNA-seq counts. Bioinform. 37(12): 1699-1707 (2021) - 2020
- [j7]Sean D. McCabe, Dan-Yu Lin, Michael I. Love:
Consistency and overfitting of multi-omics methods on experimental data. Briefings Bioinform. 21(4): 1277-1284 (2020) - [j6]Hirak Sarkar
, Avi Srivastava, Héctor Corrada Bravo, Michael I. Love, Rob Patro:
Terminus enables the discovery of data-driven, robust transcript groups from RNA-seq data. Bioinform. 36(Supplement-1): i102-i110 (2020) - [j5]Michael I. Love
, Charlotte Soneson
, Peter F. Hickey
, Lisa K. Johnson
, N. Tessa Pierce
, Lori A. Shepherd
, Martin Morgan, Rob Patro
:
Tximeta: Reference sequence checksums for provenance identification in RNA-seq. PLoS Comput. Biol. 16(2) (2020) - [i2]Miheer Dewaskar
, John Palowitch, Mark He, Michael I. Love, Andrew B. Nobel:
Finding Stable Groups of Cross-Correlated Features in Multi-View data. CoRR abs/2009.05079 (2020)
2010 – 2019
- 2019
- [j4]Yuchen Yang, Ruth Huh, Houston W. Culpepper, Yuan Lin, Michael I. Love
, Yun Li:
SAFE-clustering: Single-cell Aggregated (from Ensemble) clustering for single-cell RNA-seq data. Bioinform. 35(8): 1269-1277 (2019) - [j3]Anqi Zhu
, Joseph G. Ibrahim, Michael I. Love
:
Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences. Bioinform. 35(12): 2084-2092 (2019) - 2018
- [j2]Alena van Bömmel
, Michael I. Love
, Ho-Ryun Chung
, Martin Vingron:
coTRaCTE predicts co-occurring transcription factors within cell-type specific enhancers. PLoS Comput. Biol. 14(8) (2018) - [i1]Michael I. Love
, Charlotte Soneson
, Rob Patro
:
Swimming downstream: statistical analysis of differential transcript usage following Salmon quantification. F1000Research 7: 952 (2018) - 2012
- [j1]Ruping Sun, Michael I. Love
, Tomasz Zemojtel, Anne-Katrin Emde, Ho-Ryun Chung
, Martin Vingron, Stefan A. Haas
:
Breakpointer: using local mapping artifacts to support sequence breakpoint discovery from single-end reads. Bioinform. 28(7): 1024-1025 (2012)
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