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Ryuichiro Nakato

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2020 – today

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2023
[j5]
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  - journals/nar/WangN23
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Jiankang Wang, Ryuichiro Nakato:
CohesinDB: a comprehensive database for decoding cohesin-related epigenomes, 3D genomes and transcriptomes in human cells. Nucleic Acids Res. 51(D1): 70-79 (2023)
2022
[j4]
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Jiankang Wang, Ryuichiro Nakato:
HiC1Dmetrics: framework to extract various one-dimensional features from chromosome structure data. Briefings Bioinform. 23(1) (2022)

2010 – 2019

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2018
[j3]
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Ryuichiro Nakato, Katsuhiko Shirahige:
Sensitive and robust assessment of ChIP-seq read distribution using a strand-shift profile. Bioinform. 34(14): 2356-2363 (2018)
2017
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Ryuichiro Nakato, Katsuhiko Shirahige:
Recent advances in ChIP-seq analysis: from quality management to whole-genome annotation. Briefings Bioinform. 18(2): 279-290 (2017)
2010
[j1]
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Ryuichiro Nakato, Osamu Gotoh:
Cgaln: fast and space-efficient whole-genome alignment. BMC Bioinform. 11: 224 (2010)

2000 – 2009

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2008
[c1]
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Ryuichiro Nakato, Osamu Gotoh:
A Novel Method for Reducing Computational Complexity of Whole Genome Sequence Alignment. APBC 2008: 101-110

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