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Berthold Göttgens
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2010 – 2019
- 2019
- [j16]Blanca Pijuan-Sala, Jonathan A. Griffiths, Carolina Guibentif, Tom W. Hiscock, Wajid Jawaid, Fernando J. Calero-Nieto, Carla Mulas, Ximena Ibarra-Soria, Richard C. V. Tyser, Debbie Lee Lian Ho, Wolf Reik, Shankar Srinivas, Benjamin D. Simons, Jennifer Nichols, John C. Marioni, Berthold Göttgens:
A single-cell molecular map of mouse gastrulation and early organogenesis. Nat. 566(7745): 490-495 (2019) - [j15]Dorin-Mirel Popescu, Rachel A. Botting, Emily Stephenson, Kile Green, Simone Webb, Laura Jardine, Emily F. Calderbank, Krzysztof Polanski, Issac Goh, Mirjana Efremova, Meghan Acres, Daniel Maunder, Peter Vegh, Yorick Gitton, Jong-Eun Park, Roser Vento-Tormo, Zhichao Miao, David Dixon, Rachel Rowell, David McDonald, James Fletcher, Elizabeth Poyner, Gary Reynolds, Michael Mather, Corina Moldovan, Lira Mamanova, Frankie Greig, Matthew D. Young, Kerstin B. Meyer, Steven Lisgo, Jaume Bacardit, Andrew Fuller, Ben Millar, Barbara Innes, Susan Lindsay, Michael J. T. Stubbington, Monika S. Kowalczyk, Bo Li, Orr Ashenberg, Marcin Tabaka, Danielle Dionne, Timothy L. Tickle, Michal Slyper, Orit Rozenblatt-Rosen, Andrew Filby, Peter Carey, Alexandra-Chloé Villani, Anindita Roy, Aviv Regev, Alain Chédotal, Irene Roberts, Berthold Göttgens, Sam Behjati, Elisa Laurenti, Sarah A. Teichmann, Muzlifah Haniffa:
Decoding human fetal liver haematopoiesis. Nat. 574(7778): 365-371 (2019) - [j14]M. S. Vijayabaskar, Debbie K. Goode, Nadine Obier, Monika Lichtinger, Amber M. L. Emmett, Fatin N. Zainul Abidin, Nisar Shar, Rebecca Hannah, Salam A. Assi, Michael Lie-A.-Ling, Berthold Göttgens, Georges Lacaud, Valerie Kouskoff, Constanze Bonifer, David R. Westhead:
Identification of gene specific cis-regulatory elements during differentiation of mouse embryonic stem cells: An integrative approach using high-throughput datasets. PLoS Comput. Biol. 15(11) (2019) - 2018
- [j13]Felicia S. L. Ng, David Ruau, Lorenz Wernisch, Berthold Göttgens:
A graphical model approach visualizes regulatory relationships between genome-wide transcription factor binding profiles. Briefings Bioinform. 19(1): 162-173 (2018) - [j12]Steven Woodhouse, Nir Piterman, Christoph M. Wintersteiger, Berthold Göttgens, Jasmin Fisher:
SCNS: a graphical tool for reconstructing executable regulatory networks from single-cell genomic data. BMC Syst. Biol. 12(1): 59:1-59:7 (2018) - 2016
- [j11]Chee Yee Lim, Huange Wang, Steven Woodhouse, Nir Piterman, Lorenz Wernisch, Jasmin Fisher, Berthold Göttgens:
BTR: training asynchronous Boolean models using single-cell expression data. BMC Bioinform. 17: 355 (2016) - [j10]Daphne Ezer, Victoria Moignard, Berthold Göttgens, Boris Adryan:
Determining Physical Mechanisms of Gene Expression Regulation from Single Cell Gene Expression Data. PLoS Comput. Biol. 12(8) (2016) - 2015
- [j9]Manuel Sánchez-Castillo, David Ruau, Adam C. Wilkinson, Felicia S. L. Ng, Rebecca Hannah, Evangelia Diamanti, Patrick Lombard, Nicola K. Wilson, Berthold Göttgens:
CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities. Nucleic Acids Res. 43(Database-Issue): 1117-1123 (2015) - 2014
- [j8]Florian Buettner, Victoria Moignard, Berthold Göttgens, Fabian J. Theis:
Probabilistic PCA of censored data: accounting for uncertainties in the visualization of high-throughput single-cell qPCR data. Bioinform. 30(13): 1867-1875 (2014) - [j7]Christopher Pooley, David Ruau, Patrick Lombard, Berthold Göttgens, Anagha Joshi:
TRES predicts transcription control in embryonic stem cells. Bioinform. 30(20): 2983-2985 (2014) - 2013
- [j6]Nicola Bonzanni, Abhishek Garg, K. Anton Feenstra, Judith Schütte, Sarah Kinston, Diego Miranda-Saavedra, Jaap Heringa, Ioannis Xenarios, Berthold Göttgens:
Hard-wired heterogeneity in blood stem cells revealed using a dynamic regulatory network model. Bioinform. 29(13): 80-88 (2013) - 2010
- [j5]Jatin Narula, Aileen M. Smith, Berthold Göttgens, Oleg A. Igoshin:
Modeling Reveals Bistability and Low-Pass Filtering in the Network Module Determining Blood Stem Cell Fate. PLoS Comput. Biol. 6(5) (2010)
2000 – 2009
- 2009
- [j4]Diego Miranda-Saavedra, Subhajyoti De, Matthew W. B. Trotter, Sarah A. Teichmann, Berthold Göttgens:
BloodExpress: a database of gene expression in mouse haematopoiesis. Nucleic Acids Res. 37(Database-Issue): 873-879 (2009) - 2006
- [j3]Ian John Donaldson, Berthold Göttgens:
TFBScluster web server for the identification of mammalian composite regulatory elements. Nucleic Acids Res. 34(Web-Server-Issue): 524-528 (2006) - 2005
- [j2]Ian John Donaldson, Michael Chapman, Berthold Göttgens:
TFBScluster: a resource for the characterization of transcriptional regulatory networks. Bioinform. 21(13): 3058-3059 (2005) - 2003
- [j1]Michael Brudno, Michael Chapman, Berthold Göttgens, Serafim Batzoglou, Burkhard Morgenstern:
Fast and sensitive multiple alignment of large genomic sequences. BMC Bioinform. 4: 66 (2003)
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