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2024
[j38]
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Alexia Giannoula, Mercè Comas, Xavier Castells, Francisco Estupiñán-Romero, Enrique Bernal-Delgado, Ferran Sanz, Maria Sala:
Exploring long-term breast cancer survivors' care trajectories using dynamic time warping-based unsupervised clustering. J. Am. Medical Informatics Assoc. 31(4): 820-831 (2024)
2021
[j37]
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Alexia Giannoula, Emilio Centeno, Miguel Angel Mayer, Ferran Sanz, Laura I. Furlong:
A system-level analysis of patient disease trajectories based on clinical, phenotypic and molecular similarities. Bioinform. 37(10): 1435-1443 (2021)
[j36]
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Manuel Pastor, José C. Gómez-Tamayo, Ferran Sanz:
Flame: an open source framework for model development, hosting, and usage in production environments. J. Cheminformatics 13(1): 31 (2021)
[j35]
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  - journals/ploscb/TrincadoRPFSYE21
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Juan L. Trincado, Marina Reixachs-Solé, Judith Pérez-Granado, Tim Fugmann, Ferran Sanz, Jun Yokota, Eduardo Eyras:
ISOTOPE: ISOform-guided prediction of epiTOPEs in cancer. PLoS Comput. Biol. 17(9) (2021)
2020
[j34]
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Janet Piñero González, Juan Manuel Ramírez-Anguita, Josep Saüch-Pitarch, Francesco Ronzano, Emilio Centeno, Ferran Sanz, Laura I. Furlong:
The DisGeNET knowledge platform for disease genomics: 2019 update. Nucleic Acids Res. 48(Database-Issue): D845-D855 (2020)
2018
[j33]
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Oriol López-Massaguer, Ferran Sanz, Manuel Pastor:
An automated tool for obtaining QSAR-ready series of compounds using semantic web technologies. Bioinform. 34(1): 131-133 (2018)
[j32]
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Alba Gutiérrez-Sacristán, Àlex Bravo, Alexia Giannoula, Miguel Angel Mayer, Ferran Sanz, Laura Inés Furlong:
comoRbidity: an R package for the systematic analysis of disease comorbidities. Bioinform. 34(18): 3228-3230 (2018)
[j31]
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Lucía Romero, Jordi Cano, Julio Gomis-Tena, Beatriz Trénor, Ferran Sanz, Manuel Pastor, Javier Saiz:
In Silico QT and APD Prolongation Assay for Early Screening of Drug-Induced Proarrhythmic Risk. J. Chem. Inf. Model. 58(4): 867-878 (2018)
2017
[j30]
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Alba Gutiérrez-Sacristán, Àlex Bravo, Marta Portero-Tresserra, Olga Valverde, Antonio Armario, M. C. Blanco-Gandía, Adriana Farré, Lierni Fernández-Ibarrondo, Francina Fonseca, Jesús Giraldo, Angela Leis, Anna Mané, Miguel Angel Mayer, Sandra Montagud-Romero, Roser Nadal, Jordi Ortiz, Francisco Javier Pavon, Ezequiel Perez, Marta Rodríguez-Arias, Antonia Serrano, Marta Torrens, Vincent Warnault, Ferran Sanz, Laura I. Furlong:
Text mining and expert curation to develop a database on psychiatric diseases and their genes. Database J. Biol. Databases Curation 2017: bax043 (2017)
[j29]
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Janet Piñero González, Àlex Bravo, Núria Queralt-Rosinach, Alba Gutiérrez-Sacristán, Jordi Deu-Pons, Emilio Centeno, Javier García-García, Ferran Sanz, Laura I. Furlong:
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants. Nucleic Acids Res. 45(Database-Issue): D833-D839 (2017)
2016
[j28]
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Núria Queralt-Rosinach, Janet Piñero González, Àlex Bravo, Ferran Sanz, Laura I. Furlong:
DisGeNET-RDF: harnessing the innovative power of the Semantic Web to explore the genetic basis of diseases. Bioinform. 32(14): 2236-2238 (2016)
[j27]
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Núria Queralt-Rosinach, Tobias Kuhn, Christine Chichester, Michel Dumontier, Ferran Sanz, Laura I. Furlong:
Publishing DisGeNET as nanopublications. Semantic Web 7(5): 519-528 (2016)
2015
[j26]
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Janet Piñero González, Núria Queralt-Rosinach, Àlex Bravo, Jordi Deu-Pons, Anna Bauer-Mehren, Martin Baron, Ferran Sanz, Laura Inés Furlong:
DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes. Database J. Biol. Databases Curation 2015 (2015)
[j25]
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Alba Gutiérrez-Sacristán, Solène Grosdidier, Olga Valverde, Marta Torrens, Àlex Bravo, Janet Piñero González, Ferran Sanz, Laura Inés Furlong:
PsyGeNET: a knowledge platform on psychiatric disorders and their genes. Bioinform. 31(18): 3075-3077 (2015)
[j24]
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  - journals/jcheminf/CarrioLSP15
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Pau Carrió, Oriol López, Ferran Sanz, Manuel Pastor:
eTOXlab, an open source modeling framework for implementing predictive models in production environments. J. Cheminformatics 7: 8 (2015)
2014
[j23]
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Pau Carrió, Marta Pinto, Gerhard F. Ecker, Ferran Sanz, Manuel Pastor:
Applicability Domain Analysis (ADAN): A Robust Method for Assessing the Reliability of Drug Property Predictions. J. Chem. Inf. Model. 54(5): 1500-1511 (2014)
2012
[j22]
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  - journals/computing/MaojoFMICGCMABBBCFGGGGGHHKKLLLMMMOPPPSK12
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Victor Maojo, Martin Fritts, Fernando Martín-Sánchez, Diana de la Iglesia, Raul E. Cachau, Miguel García-Remesal, José Crespo, Joyce A. Mitchell, Alberto Anguita, Nathan A. Baker, José María Barreiro, Sonia E. Benitez, Guillermo de la Calle, Julio C. Facelli, Peter Ghazal, Antoine Geissbühler, Fernando D. González Nilo, Norbert M. Graf, Pierre Grangeat, Isabel Hermosilla, Rada Hussein, Josipa Kern, Sabine Koch, Yannick Legré, Victoria López-Alonso, Guillermo López-Campos, Luciano Milanesi, Vassilis Moustakis, Cristian R. Munteanu, Paula Otero, Alejandro Pazos, David Pérez-Rey, George Potamias, Ferran Sanz, Casimir A. Kulikowski:
Nanoinformatics: developing new computing applications for nanomedicine. Computing 94(6): 521-539 (2012)
[j21]
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Anna Bauer-Mehren, Erik M. van Mulligen, Paul Avillach, María del Carmen Carrascosa, Ricard García-Serna, Janet Piñero González, Bharat Singh, Pedro Lopes, José Luís Oliveira, Gayo Diallo, Ernst Ahlberg Helgee, Scott Boyer, Jordi Mestres, Ferran Sanz, Jan A. Kors, Laura Inés Furlong:
Automatic Filtering and Substantiation of Drug Safety Signals. PLoS Comput. Biol. 8(4) (2012)
2011
[j20]
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Cristian Obiol-Pardo, Julio Gomis-Tena, Ferran Sanz, Javier Saiz, Manuel Pastor:
A Multiscale Simulation System for the Prediction of Drug-Induced Cardiotoxicity. J. Chem. Inf. Model. 51(2): 483-492 (2011)
2010
[j19]
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Anna Bauer-Mehren, Michael Rautschka, Ferran Sanz, Laura Inés Furlong:
DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks. Bioinform. 26(22): 2924-2926 (2010)
[j18]
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Jana Selent, Ferran Sanz, Manuel Pastor, Gianni De Fabritiis:
Induced Effects of Sodium Ions on Dopaminergic G-Protein Coupled Receptors. PLoS Comput. Biol. 6(8) (2010)
2009
[j17]
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Anna Bauer-Mehren, Laura Inés Furlong, Michael Rautschka, Ferran Sanz:
From SNPs to pathways: integration of functional effect of sequence variations on models of cell signalling pathways. BMC Bioinform. 10(S-8): 6 (2009)
2008
[j16]
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Laura Inés Furlong, Holger Dach, Martin Hofmann-Apitius, Ferran Sanz:
OSIRISv1.2: A named entity recognition system for sequence variants of genes in biomedical literature. BMC Bioinform. 9 (2008)
2007
[j15]
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  - journals/jbcb/KlingerFMFHFS07
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Roman Klinger, Christoph M. Friedrich, Heinz-Theodor Mevissen, Juliane Fluck, Martin Hofmann-Apitius, Laura Inés Furlong, Ferran Sanz:
Identifying gene-Specific Variations in Biomedical Text. J. Bioinform. Comput. Biol. 5(6): 1277-1296 (2007)
2006
[j14]
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Julio Bonis, Laura Inés Furlong, Ferran Sanz:
OSIRIS: a tool for retrieving literature about sequence variants. Bioinform. 22(20): 2567-2569 (2006)
2002
[j13]
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Ferran Sanz, Federico Gago:
Current perspective of information technologies in drug discovery. J. Comput. Aided Mol. Des. 16(11): 767-768 (2002)
[j12]
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Manuel Pastor, Paolo Benedetti, Angelo Carotti, Antonio Carrieri, Carlos Díaz, Cristina Herráiz, Hans-Dieter Höltje, Maria Isabel Loza, Tudor I. Oprea, Fernando Padín, Francesc Pubill, Ferran Sanz, Friederike Stoll:
Distant collaboration in drug discovery: The LINK3D project. J. Comput. Aided Mol. Des. 16(11): 809-818 (2002)
2001
[j11]
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Orazio Nicolotti, Marialuisa Pellegrini-Calace, Antonio Carrieri, Cosimo Damiano Altomare, Nuria B. Centeno, Ferran Sanz, Andrea Carotti:
Neuronal nicotinic receptor agonists: a multi-approach development of the pharmacophore. J. Comput. Aided Mol. Des. 15(9): 859-872 (2001)
[j10]
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Orazio Nicolotti, Marialuisa Pellegrini-Calace, Antonio Carrieri, Cosimo Damiano Altomare, Nuria B. Centeno, Ferran Sanz, Andrea Carotti:
Erratum to 'Neuronal nicotinic receptor agonists: a multi-approach development of the pharmacophore' [J. Comput. Aid. Mol. Des., Vol. 15 (2001) 859]. J. Comput. Aided Mol. Des. 15(12): 1153 (2001)
2000
[j9]
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Miquel de Cáceres, Jordi Villá, Juan José Lozano, Ferran Sanz:
MIPSIM: similarity analysis of molecular interaction potentials. Bioinform. 16(6): 568-569 (2000)
[j8]
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Montserrat Martín-Baranera, Joan J. Sancho, Ferran Sanz:
Controlling for Chance Agreement in the Validation of Medical Expert Systems with No Gold Standard: PNEUMON-IA and RENOIR Revisited. Comput. Biomed. Res. 33(6): 380-397 (2000)
[j7]
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Juan José Lozano, Manuel Pastor, Gabriele Cruciani, Katrin Gaedt, Nuria B. Centeno, Federico Gago, Ferran Sanz:
3D-QSAR methods on the basis of ligand-receptor complexes. Application of COMBINE and GRID/GOLPE methodologies to a series of CYP1A2 ligands. J. Comput. Aided Mol. Des. 14(4): 341-353 (2000)
1999
[j6]
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Pirkko Nykänen, John Enning, Jan L. Talmon, Dirk Hoyer, Ferran Sanz, Christine Thayer, Risto Roine, Marieke Vissers, Fabienne Eurlings:
Inventory of validation approaches in selected health telematics projects. Int. J. Medical Informatics 56(1-3): 87-96 (1999)
[j5]
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Jan L. Talmon, John Enning, Guido Castãneda, Fabienne Eurlings, Dirk Hoyer, Pirkko Nykänen, Ferran Sanz, Christine Thayer, Marieke Vissers:
The VATAM guidelines. Int. J. Medical Informatics 56(1-3): 107-115 (1999)
1997
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Juan José Lozano, Elena López-de-Briñas, Nuria B. Centeno, Roderic Guigó, Ferran Sanz:
Three-dimensional modelling of human cytochrome P450 1A2 and its interaction with caffeine and MeIQ. J. Comput. Aided Mol. Des. 11(4): 395-408 (1997)
1993
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Ferran Sanz, Francesc Manaut, Jesús Rodríguez, Estrella Lozoya, Elena López-de-Briñas:
MEPSIM: A computational package for analysis and comparison of molecular electrostatic potentials. J. Comput. Aided Mol. Des. 7(3): 337-347 (1993)
[j2]
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Jesús Rodríguez, Francesc Manaut, Ferran Sanz:
Quantitative comparison of molecular electrostatic potential distributions from several semiempirical and ab initio wave functions. J. Comput. Chem. 14(8): 922-927 (1993)
1991
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Francesc Manaut, Ferran Sanz, Jaume José, Massimo Milesi:
Automatic search for maximum similarity between molecular electrostatic potential distributions. J. Comput. Aided Mol. Des. 5(4): 371-380 (1991)

Conference and Workshop Papers

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2020
[c13]
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Angela Leis, Miguel Angel Mayer, Francesco Ronzano, Marta Torrens, Claudio Castillo, Laura I. Furlong, Ferran Sanz:
Clinical-Based and Expert Selection of Terms Related to Depression for Twitter Streaming and Language Analysis. MIE 2020: 921-925
2018
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  - conf/cinc/CanoGAABGPSRS18
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Jordi Cano, Julio Gomis-Tena, Alexander Amberg, Lennart Anger, Véronique Ballet, Jean-Michel Guillon, Manuel Pastor, Ferran Sanz, Lucía Romero, Javier Saiz:
Development and Validation of an In Silico Rabbit Purkinje Cell Action Potential Model: A Step Towards a Drug Safety Testing Tool. CinC 2018: 1-4
2016
[c11]
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Alba Gutiérrez-Sacristán, Àlex Bravo, Marta Portero-Tresserra, Olga Valverde, Antonio Armario, M. C. Blanco-Gandía, Adriana Farré, Lierni Fernández-Ibarrondo, Francina Fonseca, Jesús Giraldo, Angela Leis, Anna Mané, Miguel Angel Mayer, Sandra Montagud-Romero, Roser Nadal, Jordi Ortiz, Francisco Javier Pavon, Ezequiel Perez, Marta Rodríguez-Arias, Antonia Serrano, Marta Torrens, Vincent Warnault, Ferran Sanz, Laura I. Furlong:
Text Mining and Expert Curation to Develop a Database on Psychiatric Diseases and their Genes. SMBM 2016: 48-55
2015
[c10]
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Miguel Angel Mayer, Laura Inés Furlong, Pilar Torre, Ignasi Planas, Francesc Cots, Elisabet Izquierdo, Jordi Portabella, Javier Rovira, Alba Gutiérrez-Sacristán, Ferran Sanz:
Reuse of EHRs to Support Clinical Research in a Hospital of Reference. MIE 2015: 224-226
2008
[c9]
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Christoph M. Friedrich, Martin Hofmann-Apitius, Robert Dunlop, Ioannis Chronakis, Miriam C. J. M. Sturkenboom, Roelof Risselada, Baldo Oliva, Ferran Sanz:
Initial Results on Knowledge Discovery and Decision Support for Intracranial Aneurysms. HEALTHINF (1) 2008: 265-272
2005
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Victor Maojo, Guillermo de la Calle, Fernando Martín-Sánchez, Carlos Díaz, Ferran Sanz:
INFOBIOMED: European Network of Excellence on Biomedical Informatics to Support Individualised Healthcare. AMIA 2005
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José Antonio Heredia, Antonio Estruch, Óscar Coltell, David Rey, Guillermo de la Calle, Juan Sánchez, Ferran Sanz:
Service Oriented Architecture for Biomedical Collaborative Research. ISBMDA 2005: 252-261
2004
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Ferran Sanz, Carlos Díaz, Fernando Martín-Sánchez, Julio Bonis:
European Support to Biomedical Informatics Development: in Pursue of Genomic Medicine. BIBE 2004: 215-221
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Victor Maojo, Fernando Martín-Sánchez, José María Barreiro, Carlos Díaz, Ferran Sanz:
Biomedical Informatics: From Past Experiences to the Infobiomed Network of Excellence. ISBMDA 2004: 418-426
[c4]
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Ferran Sanz, Carlos Díaz, Fernando Martín-Sánchez, Victor Maojo:
Structuring European Biomedical Informatics to Support Individualized Healthcare: current issues and future trends. MedInfo 2004: 803-807
1999
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Ferran Sanz, Claudio Sil Veira, Albert Alonso, Carles Díaz, Maria Isabel Loza, Luis Cordero, Fernando Fernandez-Llimós, Lisette Tiddens, Flora Giorgio, Hubertus Cranz, Jasmina Mircheva:
Telematics applications to support the role of the community pharmacists as self-medication advisors. MIE 1999: 764-767
1992
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Joan C. González, Joan J. Sancho, Joan M. Carbó, Alex Patak, Ferran Sanz:
Intelligent Tutorial System in Medicine through an Interactive Testing Program: HyperMIR. ICCAL 1992: 238-246
1991
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Joan M. Carbó, Joan J. Sancho, M. José Miravitlles, Joan C. González, Ferran Sanz:
A New Approach to Computerized Medical Knowledge Assessment. MIE 1991: 615-619

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2009
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Laura I. Furlong, Ferran Sanz:
Identification of Sequence Variants of Genes from Biomedical Literature. Information Retrieval in Biomedicine 2009: 289-300

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2004
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José María Barreiro, Fernando Martín-Sánchez, Victor Maojo, Ferran Sanz:
Biological and Medical Data Analysis, 5th International Symposium, ISBMDA 2004, Barcelona, Spain, November 18-19, 2004, Proceedings. Lecture Notes in Computer Science 3337, Springer 2004, ISBN 3-540-23964-2 [contents]

Informal and Other Publications

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2020
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David Salgado, Irina M. Armean, Michael Baudis, Sergi Beltran, Salvador Capella-Gutiérrez, Denise Carvalho-Silva, Victoria Dominguez Del Angel, Joaquín Dopazo, Laura I. Furlong, Bo Gao, Leyla Jael García Castro, Dietlind Gerloff, Ivo Gut, Attila Gyenesei, Nina Habermann, John M. Hancock, Marc Hanauer, Eivind Hovig, Lennart F. Johansson, Thomas Keane, Jan Korbel, Katharina B. Lauer, Steve Laurie, Brane Leskosek, David Lloyd, Tomàs Marquès-Bonet, Hailiang Mei, Katalin Monostory, Janet Piñero, Krzysztof Poterlowicz, Ana Rath, Pubudu Samarakoon, Ferran Sanz, Gary Saunders, Daoud Sie, Morris A. Swertz, Kirill Tsukanov, Alfonso Valencia, Marko Vidak, Cristina Yenyxe González, Bauke Ylstra, Christophe Béroud:
The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research. F1000Research 9: 1229 (2020)
2017
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Rafael C. Jiménez, Mateusz Kuzak, Monther Alhamdoosh, Michelle Barker, Bérénice Batut, Mikael Borg, Salvador Capella-Gutiérrez, Neil P. Chue Hong, Martin Cook, Manuel Corpas, Madison Flannery, Leyla J. García, Josep Lluis Gelpí, Simon L. Gladman, Carole A. Goble, Montserrat González Ferreiro, Alejandra N. González-Beltrán, Philippa C. Griffin, Björn A. Grüning, Jonas Hagberg, Petr Holub, Rob W. W. Hooft, Jon C. Ison, Daniel S. Katz, Brane Leskosek, Federico López-Gómez, Luis J. Oliveira, David Mellor, Rowland Mosbergen, Nicola J. Mulder, Yasset Pérez-Riverol, Robert Pergl, Horst Pichler, Bernard J. Pope, Ferran Sanz, Maria Victoria Schneider, Victoria Stodden, Radoslaw Suchecki, Radka Svobodová Vareková, Harry-Anton Talvik, Ilian T. Todorov, Andrew E. Treloar, Sonika Tyagi, Maarten van Gompel, Daniel Vaughan, Allegra Via, Xiaochuan Wang, Nathan S. Watson-Haigh, Steve Crouch:
Four simple recommendations to encourage best practices in research software. F1000Research 6: 876- (2017)

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