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Claire Lemaitre
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2020 – today
- 2023
- [j13]Sandra Romain, Claire Lemaitre:
SVJedi-graph: improving the genotyping of close and overlapping structural variants with long reads using a variation graph. Bioinform. 39(Supplement-1): 270-278 (2023) - [j12]Anne Guichard
, Fabrice Legeai
MTG-Link: leveraging barcode information from linked-reads to assemble specific loci. BMC Bioinform. 24(1): 284 (2023) - 2021
- [b2]Claire Lemaitre:
Méthodes bioinformatiques pour l'étude des Variants de Structure avec des données de séquençages génomiques. University of Rennes 1, France, 2021 - 2020
- [j11]Gaëtan Benoit, Mahendra Mariadassou, Stéphane Robin, Sophie Schbath
SimkaMin: fast and resource frugal de novo comparative metagenomics. Bioinform. 36(4): 1275-1276 (2020) - [j10]Lolita Lecompte
SVJedi: genotyping structural variations with long reads. Bioinform. 36(17): 4568-4575 (2020)
2010 – 2019
- 2017
- [p1]Gaëtan Benoit, Claire Lemaitre, Guillaume Rizk, Erwan Drezen, Dominique Lavenier:
De Novo NGS Data Compression. Algorithms for Next-Generation Sequencing Data 2017: 91-115 - 2016
- [j9]Gaëtan Benoit, Pierre Peterlongo, Mahendra Mariadassou, Erwan Drezen, Sophie Schbath
Multiple comparative metagenomics using multiset k-mer counting. PeerJ Comput. Sci. 2: e94 (2016) - 2015
- [j8]Gaëtan Benoit, Claire Lemaitre, Dominique Lavenier, Erwan Drezen, Thibault Dayris, Raluca Uricaru, Guillaume Rizk:
Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph. BMC Bioinform. 16: 288:1-288:14 (2015) - 2014
- [j7]Erwan Drezen, Guillaume Rizk, Rayan Chikhi, Charles Deltel, Claire Lemaitre, Pierre Peterlongo
GATB: Genome Assembly & Analysis Tool Box. Bioinform. 30(20): 2959-2961 (2014) - [j6]Guillaume Rizk, Anaïs Gouin, Rayan Chikhi, Claire Lemaitre:
MindTheGap: integrated detection and assembly of short and long insertions. Bioinform. 30(24): 3451-3457 (2014) - [c1]Claire Lemaitre, Liviu Ciortuz, Pierre Peterlongo:
Mapping-Free and Assembly-Free Discovery of Inversion Breakpoints from Raw NGS Reads. AlCoB 2014: 119-130 - [i1]Gaëtan Benoit, Claire Lemaitre, Dominique Lavenier, Guillaume Rizk:
Compression of high throughput sequencing data with probabilistic de Bruijn graph. CoRR abs/1412.5932 (2014) - 2012
- [j5]Nicolas Maillet, Claire Lemaitre, Rayan Chikhi, Dominique Lavenier, Pierre Peterlongo
Compareads: comparing huge metagenomic experiments. BMC Bioinform. 13(S-19): S10 (2012) - 2011
- [j4]Claire Lemaitre, Aurélien Barré, Christine Citti
A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships. BMC Bioinform. 12: 457 (2011) - 2010
- [j3]Christian Baudet, Claire Lemaitre, Zanoni Dias, Christian Gautier, Eric Tannier, Marie-France Sagot:
Cassis: detection of genomic rearrangement breakpoints. Bioinform. 26(15): 1897-1898 (2010)
2000 – 2009
- 2008
- [b1]Claire Lemaitre:
Réarrangements chromosomiques dans les génomes de mammifères : caractérisation des points de cassure. (Chromosomal rearrangements in mammalian genomes : characterising the breakpoints). Claude Bernard University Lyon 1, France, 2008 - [j2]Claire Lemaitre, Eric Tannier, Christian Gautier, Marie-France Sagot:
Precise detection of rearrangement breakpoints in mammalian chromosomes. BMC Bioinform. 9 (2008) - [j1]Claire Lemaitre, Marie-France Sagot:
A small trip in the untranquil world of genomes: A survey on the detection and analysis of genome rearrangement breakpoints. Theor. Comput. Sci. 395(2-3): 171-192 (2008)
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