default search action
Hidde de Jong
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2022
- [j31]Agustín Gabriel Yabo
, Jean-Baptiste Caillau
Dynamical Analysis and Optimization of a Generalized Resource Allocation Model of Microbial Growth. SIAM J. Appl. Dyn. Syst. 21(1): 137-165 (2022) - 2020
- [j30]Marco Mauri
Enhanced production of heterologous proteins by a synthetic microbial community: Conditions and trade-offs. PLoS Comput. Biol. 16(4) (2020)
2010 – 2019
- 2019
- [j29]Yannick Martin, Michel Page, Christophe Blanchet, Hidde de Jong
WellInverter: a web application for the analysis of fluorescent reporter gene data. BMC Bioinform. 20(1): 309:1-309:18 (2019) - [c25]Eugenio Cinquemani, Francis Mairet
Optimal control of bacterial growth for metabolite production: The role of timing and costs of control. ECC 2019: 2657-2662 - 2018
- [j28]Andreas Kremling
An ensemble of mathematical models showing diauxic growth behaviour. BMC Syst. Biol. 12(1): 82:1-82:16 (2018) - 2017
- [j27]Eugenio Cinquemani, Valérie Laroute, Muriel Cocaign-Bousquet
Estimation of time-varying growth, uptake and excretion rates from dynamic metabolomics data. Bioinform. 33(14): i301-i310 (2017) - 2016
- [j26]Nils Giordano
Dynamical Allocation of Cellular Resources as an Optimal Control Problem: Novel Insights into Microbial Growth Strategies. PLoS Comput. Biol. 12(3) (2016) - 2015
- [j25]Valentin Zulkower, Michel Page, Delphine Ropers
Robust reconstruction of gene expression profiles from reporter gene data using linear inversion. Bioinform. 31(12): 71-79 (2015) - [j24]Diana Stefan, Corinne Pinel, Stéphane Pinhal, Eugenio Cinquemani, Johannes Geiselmann
Inference of Quantitative Models of Bacterial Promoters from Time-Series Reporter Gene Data. PLoS Comput. Biol. 11(1) (2015) - 2014
- [c24]Hidde de Jong
Fluorescent Reporter Genes and the Analysis of Bacterial Regulatory Networks. HSB 2014: 27-50 - 2013
- [j23]Claudine Chaouiya
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools. BMC Syst. Biol. 7: 135 (2013) - 2011
- [j22]Sara Berthoumieux, Matteo Brilli
Identification of metabolic network models from incomplete high-throughput datasets. Bioinform. 27(13): 186-195 (2011) - [j21]Rafael Silva-Rocha
The logic layout of the TOL network of Pseudomonas putida pWW0 plasmid stems from a metabolic amplifier motif (MAM) that optimizes biodegradation of m-xylene. BMC Syst. Biol. 5: 191 (2011) - [j20]Delphine Ropers
Model Reduction Using Piecewise-Linear Approximations Preserves Dynamic Properties of the Carbon Starvation Response in Escherichia coli. IEEE ACM Trans. Comput. Biol. Bioinform. 8(1): 166-181 (2011) - [j19]Radu Mateescu, Pedro T. Monteiro
CTRL: Extension of CTL with regular expressions and fairness operators to verify genetic regulatory networks. Theor. Comput. Sci. 412(26): 2854-2883 (2011) - 2010
- [j18]Frédéric Boyer, Bruno Besson, Guillaume Baptist, Jérôme Izard, Corinne Pinel, Delphine Ropers
WellReader: a MATLAB program for the analysis of fluorescence and luminescence reporter gene data. Bioinform. 26(9): 1262-1263 (2010) - [j17]Grégory Batt, Michel Page, Irene Cantone
Efficient parameter search for qualitative models of regulatory networks using symbolic model checking. Bioinform. 26(18) (2010) - [j16]Hidde de Jong
Experimental and computational validation of models of fluorescent and luminescent reporter genes in bacteria. BMC Syst. Biol. 4: 55 (2010) - [j15]Valentina Baldazzi
The Carbon Assimilation Network in Escherichia coli Is Densely Connected and Largely Sign-Determined by Directions of Metabolic Fluxes. PLoS Comput. Biol. 6(6) (2010) - [c23]Pedro T. Monteiro
Modeling and formal verification of biological regulatory networks: An integrative approach. BIBM Workshops 2010: 812-813
2000 – 2009
- 2009
- [j14]Pedro T. Monteiro
A service-oriented architecture for integrating the modeling and formal verification of genetic regulatory networks. BMC Bioinform. 10: 450 (2009) - 2008
- [j13]Grégory Batt, Hidde de Jong
Symbolic reachability analysis of genetic regulatory networks using discrete abstractions. Autom. 44(4): 982-989 (2008) - [j12]Riccardo Porreca, Samuel Drulhe, Hidde de Jong, Giancarlo Ferrari-Trecate
Structural Identification of Piecewise-Linear Models of Genetic Regulatory Networks. J. Comput. Biol. 15(10): 1365-1380 (2008) - [j11]Samuel Drulhe, Giancarlo Ferrari-Trecate
The Switching Threshold Reconstruction Problem for Piecewise-Affine Models of Genetic Regulatory Networks. IEEE Trans. Autom. Control. 53: 153-165 (2008) - [j10]Hidde de Jong
Search for Steady States of Piecewise-Linear Differential Equation Models of Genetic Regulatory Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 5(2): 208-222 (2008) - [c22]Radu Mateescu, Pedro T. Monteiro, Estelle Dumas, Hidde de Jong:
Computation Tree Regular Logic for Genetic Regulatory Networks. ATVA 2008: 48-63 - [c21]Hidde de Jong
Qualitative Modeling and Simulation of Bacterial Regulatory Networks. CMSB 2008: 1 - [c20]Pedro T. Monteiro
Temporal Logic Patterns for Querying Qualitative Models of Genetic Regulatory Networks. ECAI 2008: 229-233 - [c19]Pedro T. Monteiro
Temporal logic patterns for querying dynamic models of cellular interaction networks. ECCB 2008: 227-233 - 2007
- [j9]Grégory Batt, Hidde de Jong, Johannes Geiselmann, Jean-Luc Gouzé
Analyse qualitative de la dynamique de réseaux de régulation génique par des modèles linéaires par morceaux. Tech. Sci. Informatiques 26(1-2): 11-45 (2007) - [c18]M. W. J. M. Musters, Hidde de Jong
Qualitative Analysis of Nonlinear Biochemical Networks with Piecewise-Affine Functions. HSCC 2007: 727-730 - 2006
- [j8]Ivayla Vatcheva, Hidde de Jong
Experiment selection for the discrimination of semi-quantitative models of dynamical systems. Artif. Intell. 170(4-5): 472-506 (2006) - [j7]Hidde de Jong
Strategies for dealing with incomplete information in the modeling of molecular interaction networks. Briefings Bioinform. 7(4): 354-363 (2006) - [c17]Samuel Drulhe, Giancarlo Ferrari-Trecate
Reconstruction of Switching Thresholds in Piecewise-Affine Models of Genetic Regulatory Networks. HSCC 2006: 184-199 - 2005
- [c16]Richard Casey, Hidde de Jong
Stability of Equilibria for Piecewise-linear Models of Genetic Regulatory Networks. CDC/ECC 2005: 3693-3698 - [c15]Grégory Batt, Delphine Ropers
Qualitative Analysis and Verification of Hybrid Models of Genetic Regulatory Networks: Nutritional Stress Response in. HSCC 2005: 134-150 - [c14]Grégory Batt, Delphine Ropers, Hidde de Jong, Johannes Geiselmann, Radu Mateescu, Michel Page, Dominique Schneider:
Analysis and Verification of Qualitative Models of Genetic Regulatory Networks: A Model-Checking Approach. IJCAI 2005: 370-375 - [c13]Grégory Batt, Delphine Ropers
Validation of qualitative models of genetic regulatory networks by model checking: analysis of the nutritional stress response in Escherichia coli. ISMB (Supplement of Bioinformatics) 2005: 19-28 - 2004
- [j6]Hidde de Jong
Qualitative simulation and related approaches for the analysis of dynamic systems. Knowl. Eng. Rev. 19(2): 93-132 (2004) - [j5]Damien Eveillard
A multi-scale constraint programming model of alternative splicing regulation. Theor. Comput. Sci. 325(1): 3-24 (2004) - [c12]Grégory Batt, Damien Bergamini, Hidde de Jong
Model Checking Genetic Regulatory Networks Using GNA and CADP. SPIN 2004: 158-163 - 2003
- [j4]Hidde de Jong
Genetic Network Analyzer: qualitative simulation of genetic regulatory networks. Bioinform. 19(3): 336-344 (2003) - [c11]Damien Eveillard
Multiscale Modeling of Alternative Splicing Regulation. CMSB 2003: 75-87 - [c10]Hidde de Jong
Hybrid Modeling and Simulation of Genetic Regulatory Networks: A Qualitative Approach. HSCC 2003: 267-282 - [c9]Hidde de Jong:
Modeling and Simulation of Genetic Regulatory Networks. POSTA 2003: 111-118 - 2002
- [j3]Hidde de Jong
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review. J. Comput. Biol. 9(1): 67-103 (2002) - [c8]Hidde de Jong, Jean-Luc Gouzé, Céline Hernandez, Michel Page, Sari Tewfik, Johannes Geiselmann:
Dealing with Discontinuities in the Qualitative Simulation of Genetic Regulatory Networks. ECAI 2002: 412-416 - 2001
- [c7]Hidde de Jong, Michel Page, Céline Hernandez, Johannes Geiselmann:
Qualitative Simulation of Genetic Regulatory Networks: Method and Application. IJCAI 2001: 67-73 - [c6]Ivayla Vatcheva, Olivier Bernard, Hidde de Jong, Jean-Luc Gouzé, Nicolaas J. I. Mars:
Discrimination of Semi-Quantitative Models by Experiment Selection: Method and Application in Population Biology. IJCAI 2001: 74-82 - 2000
- [c5]Hidde de Jong, Michel Page:
Qualitative Simulation of Large and Complex Genetic Regulation Systems. ECAI 2000: 141-145 - [c4]Ivayla Vatcheva, Hidde de Jong, Nicolaas J. I. Mars:
Selection of Perturbation Experiments for Model Discrimination. ECAI 2000: 191-198
1990 – 1999
- 1999
- [j2]Hidde de Jong
Comparative envisionment construction: A technique for the comparative analysis of dynamical systems. Artif. Intell. 115(2): 145-214 (1999) - [c3]Ivayla Vatcheva, Hidde de Jong:
Semi-Quantitative Comparative Analysis. IJCAI 1999: 1034-1040 - 1998
- [b1]Hidde de Jong:
Computer-supported analysis of scientific measurements. University of Twente, Enschede, Netherlands, 1998 - 1997
- [j1]Hidde de Jong
The Computer Revolution in Science: Steps Towards the Realization of Computer-Supported Discovery Environments. Artif. Intell. 91(2): 225-256 (1997) - [c2]Hidde de Jong, Frank van Raalte:
Comparative Analysis of STructurally Different Dynamical Systems. IJCAI (1) 1997: 486-493 - 1996
- [c1]Hidde de Jong, Nicolaas J. I. Mars, Paul E. van der Vet:
CEC: Comparative Analysis by Envisionment Construction. ECAI 1996: 476-480
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 22:07 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by: