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SoftwareX, Volume 11
Volume 11, January 2020
- Dmitry Drozin
, Sergey Sozykin
Kinetic calculation: Software tool for determining the kinetic parameters of the thermal decomposition process using the Vyazovkin Method. 100359 - Matteo Ravasi, Ivan Vasconcelos:
PyLops - A linear-operator Python library for scalable algebra and optimization. 100361 - A. Kostenko, Willem Jan Palenstijn, Sophia Bethany Coban, Allard A. Hendriksen
Prototyping X-ray tomographic reconstruction pipelines with FleXbox. 100364 - Adrian R. G. Harwood
JBlockCreator: An open source, pattern drafting framework to facilitate the automated manufacture of made-to-measure clothing. 100365 - Andrea Valenza
WAF-A-MoLE: An adversarial tool for assessing ML-based WAFs. 100367 - Konrad Werys
Total Mapping Toolbox (TOMATO): An open source library for cardiac magnetic resonance parametric mapping. 100369 - Daniel Silvestre
OPTool - An optimization toolbox for iterative algorithms. 100371 - Kara M. Koetje, Margaret L. Palmsten:
Coastal Imaging Station Design Toolbox. 100377 - Dimitrios Tsiotas, Avraam Charakopoulos
VisExpA: Visibility expansion algorithm in the topology of complex networks. 100379 - Andy Spitzenberger, Sebastian Neumann
Particle detection in VOF-simulations with OpenFOAM. 100382 - Emerson Boeira
pyvrft: A Python package for the Virtual Reference Feedback Tuning, a direct data-driven control method. 100383 - Vladimir V. Kisil:
MoebInv: C++ libraries for manipulations in non-Euclidean geometry. 100385 - Gorka Urbikain
MoniThor: A complete monitoring tool for machining data acquisition based on FPGA programming. 100387 - Ken-ichi Nomura, Rajiv K. Kalia, Aiichiro Nakano, Pankaj Rajak, Priya Vashishta:
RXMD: A scalable reactive molecular dynamics simulator for optimized time-to-solution. 100389 - Sindre Nordmark Olufsen
μDIC: An open-source toolkit for digital image correlation. 100391 - Yihong Z. Mauro, Collin J. Wilkinson, John C. Mauro:
KineticPy: A tool to calculate long-time kinetics in energy landscapes with broken ergodicity. 100393 - Jose Manuel López, Daniel Feldmann, Markus Rampp, Alberto Vela-Martín
nsCouette - A high-performance code for direct numerical simulations of turbulent Taylor-Couette flow. 100395 - Danny R. Ramasawmy, Ben T. Cox
ElasticMatrix: A MATLAB toolbox for anisotropic elastic wave propagation in layered media. 100397 - Carlos Gavidia-Calderon
Isula: A java framework for ant colony algorithms. 100400 - Ting Li, Lawrence V. Stanislawski, Tyler Brockmeyer, Shaowen Wang, Ethan Shavers:
OpenCLC: An open-source software tool for similarity assessment of linear hydrographic features. 100401 - Simone Aonzo
Obfuscapk: An open-source black-box obfuscation tool for Android apps. 100403 - Ruman Gerst, Anna Medyukhina, Marc Thilo Figge:
MISA++: A standardized interface for automated bioimage analysis. 100405 - Savas Konur, Laurentiu Mierla, Florentin Ipate, Marian Gheorghe
kPWorkbench: A software suit for membrane systems. 100407 - Michel Krämer
GeoRocket: A scalable and cloud-based data store for big geospatial files. 100409 - Alexander Y. Yurin
Personal knowledge base designer: Software for expert systems prototyping. 100411 - Thomas Janke
Part2Track: A MATLAB package for double frame and time resolved Particle Tracking Velocimetry. 100413 - Marco Archetti:
DeFinetti: A Mathematica program to analyze the replicator dynamics of 3-strategy collective interactions. 100415 - Emma Lejeune
FM-Track: A fiducial marker tracking software for studying cell mechanics in a three-dimensional environment. 100417 - Valentina Zambrano
TWINKLE: A digital-twin-building kernel for real-time computer-aided engineering. 100419 - Tahir Abbas, Vassilis-Javed Khan, Panos Markopoulos:
CoZ: A crowd-powered system for social robotics. 100421 - Qimen Xu
M-SPARC: Matlab-Simulation Package for Ab-initio Real-space Calculations. 100423 - Boris Bogaerts, Seppe Sels, Steve Vanlanduit, Rudi Penne
Connecting the CoppeliaSim robotics simulator to virtual reality. 100426 - Samuel Boudet
A fetal heart rate morphological analysis toolbox for MATLAB. 100428 - Cody J. Permann
MOOSE: Enabling massively parallel multiphysics simulation. 100430 - Taysseer Sharaf, Theren Williams, Abdallah A. Chehade
BLNN: An R package for training neural networks using Bayesian inference. 100432 - Brunno Machado de Campos, Raphael Fernandes Casseb, Fernando Cendes:
UF2C - User-Friendly Functional Connectivity: A neuroimaging toolbox for fMRI processing and analyses. 100434 - Niema Moshiri
TreeSwift: A massively scalable Python tree package. 100436 - Sebastian Schwindt
River Architect. 100438 - James A. Cornwell
TrackPad: Software for semi-automated single-cell tracking and lineage annotation. 100440 - Udit Gupta
Reaction Network Viewer (ReNView): An open-source framework for reaction path visualization of chemical reaction systems. 100442 - Ana Waldila de Queiroz Ramiro Reis, Rodrigo Bird Burgos, Margareth da Silva Magalhães
Development of a software for the numerical modeling of reinforced concrete sections - AlfaMCV. 100444 - Nikolaos Karathanasopoulos, F. Dos Reis, Panagiotis E. Hadjidoukas, Jean-François Ganghoffer:
LatticeMech: A discrete mechanics code to compute the effective static properties of 2D metamaterial structures. 100446 - Jorge Alberto Cerecedo-Cordoba, Juan Frausto Solís
NeuroFramework: A package based on neuroevolutionary algorithms to estimate the melting temperature of ionic liquids. 100448 - Konstantin Weise, Lucas Poßner
Pygpc: A sensitivity and uncertainty analysis toolbox for Python. 100450 - Robin K. S. Hankin:
Introducing the permutations R package. 100453 - Aurel Neic
Automating image-based mesh generation and manipulation tasks in cardiac modeling workflows using Meshtool. 100454 - Marília Barandas
TSFEL: Time Series Feature Extraction Library. 100456 - Matthew J. Roy, Nikola Stoyanov
pyCM: An open-source computational framework for residual stress analysis employing the Contour Method. 100458 - Patrícia Alves-Oliveira, Samuel Gomes
Software architecture for YOLO, a creativity-stimulating robot. 100461 - Nicolas Renaud, Yong Jung, Vasant G. Honavar
iScore: An MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines. 100462 - Mohamed M. S. Nasser
PlgCirMap: A MATLAB toolbox for computing conformal mappings from polygonal multiply connected domains onto circular domains. 100464 - Michael Ortner, Lucas Gabriel Coliado Bandeira:
Magpylib: A free Python package for magnetic field computation. 100466 - Richard Nisius:
BLUE: Combining correlated estimates of physics observables within ROOT using the Best Linear Unbiased Estimate method. 100468 - Dhurata Nebiu, Hiqmet Kamberaj
Symbolic Information Flow Measurement (SIFM): A software for measurement of information flow using symbolic analysis. 100470 - Conrad Stansbury
PyARPES: An analysis framework for multimodal angle-resolved photoemission spectroscopies. 100472 - Richard Semaan, Vikas Yadav:
SCOUT: Signal Correction and Uncertainty Quantification Toolbox in MATLAB. 100474 - Jürgen Dölz
Bembel: The fast isogeometric boundary element C++ library for Laplace, Helmholtz, and electric wave equation. 100476 - Lucas L. Cendes, Welliton de Souza
HPexome: An automated tool for processing whole-exome sequencing data. 100478 - Marcelo S. Medeiros, Evandro Parente
MicroFEA 1.0 - A software package for Finite Element Analysis of functionally graded materials. 100481 - Martin Heinrich, Rüdiger Schwarze
3D-coupling of Volume-of-Fluid and Lagrangian particle tracking for spray atomization simulation in OpenFOAM. 100483 - Wensi Wu
CU-BENs: A structural modeling finite element library. 100485 - Wojciech Krzemien
J-PET Framework: Software platform for PET tomography data reconstruction and analysis. 100487 - Ilia A. Bautista Adames, Sudeep Sarkar
MatlabHTM: A sequence memory model of neocortical layers for anomaly detection. 100491 - Andrea Quero Martín, Andrés Díaz Lantada
An open source medical passport based on an Android mobile application and near-field communication. 100492 - Subasish Das
RuralSpeedSafetyX: Interactive decision support tool to improve safety. 100493 - Helon Vicente Hultmann Ayala
An R library for nonlinear black-box system identification. 100495 - Umberto Maniscalco
ASS4HR - An Artificial Somatosensory System for a Humanoid Robot. The ROS package. 100501 - Marcus H. Hansen
CNAplot - Software for visual inspection of chromosomal copy number alteration in cancer using juxtaposed sequencing read depth ratios and variant allele frequencies. 100503 - Patrick K. Herring, Chirranjeevi Balaji Gopal, Muratahan Aykol, Joseph Montoya, Abraham Anapolsky, Peter M. Attia
BEEP: A Python library for Battery Evaluation and Early Prediction. 100506 - Jonas Eschle
zfit: Scalable pythonic fitting. 100508 - Editorial Board. 100529
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